Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3741

Experiment: KB with Erythromycin 25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Erythromycin 25 ug/ml
4,454,401	-		Psyr_3739	0.13	+1.0
4,454,401	-		Psyr_3739	0.13	+0.6
4,454,401	-		Psyr_3739	0.13	-0.8
4,454,499	+		Psyr_3739	0.30	-1.1
4,454,853	+		Psyr_3739	0.90	-1.9
4,455,097	+		Psyr_3740	0.42	-1.2
4,455,097	+		Psyr_3740	0.42	+0.4
4,455,145	+		Psyr_3740	0.54	-1.7
4,455,145	+		Psyr_3740	0.54	+0.2
4,455,146	-		Psyr_3740	0.54	-0.7
4,455,146	-		Psyr_3740	0.54	+0.2
4,455,184	+		Psyr_3740	0.63	-0.7
4,455,185	-		Psyr_3740	0.63	-0.5
4,455,289	+		Psyr_3740	0.88	+0.5
4,455,289	+		Psyr_3740	0.88	-1.5
4,455,289	+		Psyr_3740	0.88	-0.1
4,455,289	+		Psyr_3740	0.88	-0.2
4,455,289	+		Psyr_3740	0.88	-0.1
4,455,289	+		Psyr_3740	0.88	-1.1
4,455,290	-		Psyr_3740	0.89	+0.1
4,455,290	-		Psyr_3740	0.89	+0.9
4,455,290	-		Psyr_3740	0.89	-0.3
4,455,291	+		Psyr_3740	0.89	-0.4
4,455,292	-		Psyr_3740	0.89	-1.4
4,455,580	+		Psyr_3741	0.14	+0.2
4,455,580	+		Psyr_3741	0.14	-0.4
4,455,841	+		Psyr_3741	0.31	-0.9
4,455,842	-		Psyr_3741	0.31	+1.4
4,455,842	-		Psyr_3741	0.31	-0.9
4,455,893	-		Psyr_3741	0.35	+2.0
4,456,220	-		Psyr_3741	0.56	+1.9
4,456,313	-		Psyr_3741	0.63	-0.5
4,456,566	-		Psyr_3741	0.80	+0.6
4,456,566	-		Psyr_3741	0.80	+0.6
4,456,652	+		Psyr_3741	0.85	-0.1
4,456,652	+		Psyr_3741	0.85	+0.7
4,456,725	+				-0.8
4,456,725	+				+0.6
4,456,725	+				-0.5
4,456,725	+				-0.0
4,456,725	+				-0.9
4,456,725	+				-1.1
4,456,725	+				-1.1
4,456,725	+				-2.3
4,456,725	+				+0.3
4,456,726	-				-0.3
4,456,726	-				+0.9
4,456,726	-				-0.1
4,456,726	-				-1.7
4,456,726	-				-2.3
4,456,726	-				+0.6
4,456,726	-				+1.3
4,456,726	-				+0.5
4,456,776	+				-0.2
4,456,776	+				-1.5
4,456,777	-				+0.1
4,456,777	-				+1.5
4,456,777	-				-0.1
4,456,825	+				+0.5
4,456,825	+				+1.1
4,456,826	-				+0.3
4,457,095	+				+0.7
4,457,392	+		Psyr_3742	0.19	+0.4
4,457,392	+		Psyr_3742	0.19	+0.6
4,457,392	+		Psyr_3742	0.19	-2.1
4,457,392	+		Psyr_3742	0.19	-0.6
4,457,392	+		Psyr_3742	0.19	+0.4
4,457,393	-		Psyr_3742	0.19	-1.8
4,457,393	-		Psyr_3742	0.19	-2.1
4,457,393	-		Psyr_3742	0.19	+0.9
4,457,451	+		Psyr_3742	0.22	-0.3
4,457,451	+		Psyr_3742	0.22	+0.2
4,457,452	-		Psyr_3742	0.22	-1.4
4,457,452	-		Psyr_3742	0.22	+0.0
4,457,452	-		Psyr_3742	0.22	+0.9
4,457,452	-		Psyr_3742	0.22	-1.2
4,457,452	-		Psyr_3742	0.22	+0.9
4,457,452	-		Psyr_3742	0.22	-0.3
4,457,613	+		Psyr_3742	0.30	+0.5
4,457,614	-		Psyr_3742	0.30	+0.6
4,457,614	-		Psyr_3742	0.30	-0.9
4,457,614	-		Psyr_3742	0.30	-0.7
4,457,614	-		Psyr_3742	0.30	+0.3
4,457,620	-		Psyr_3742	0.30	+0.1
4,457,620	-		Psyr_3742	0.30	+1.2
4,457,772	-		Psyr_3742	0.38	-1.4