Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2722

Experiment: KB with Erythromycin 25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Erythromycin 25 ug/ml
3,303,445	+		Psyr_2721	0.15	-0.2
3,303,446	-		Psyr_2721	0.15	-2.0
3,303,541	+		Psyr_2721	0.26	-0.2
3,303,541	+		Psyr_2721	0.26	+0.5
3,303,541	+		Psyr_2721	0.26	+1.0
3,303,598	+		Psyr_2721	0.32	-0.4
3,303,598	+		Psyr_2721	0.32	-0.2
3,303,599	-		Psyr_2721	0.33	-0.4
3,303,599	-		Psyr_2721	0.33	+0.0
3,303,599	-		Psyr_2721	0.33	-0.4
3,303,665	-		Psyr_2721	0.40	-0.7
3,303,800	+		Psyr_2721	0.56	-0.6
3,303,817	+		Psyr_2721	0.58	-0.4
3,303,818	-		Psyr_2721	0.58	+1.8
3,303,895	+		Psyr_2721	0.66	-0.7
3,303,896	-		Psyr_2721	0.67	+0.6
3,303,896	-		Psyr_2721	0.67	+0.8
3,303,896	-		Psyr_2721	0.67	-0.2
3,303,932	+		Psyr_2721	0.71	-0.0
3,304,121	+				-0.5
3,304,121	+				-0.5
3,304,121	+				-1.4
3,304,121	+				+2.1
3,304,122	-				-1.5
3,304,122	-				+0.3
3,304,122	-				+0.4
3,304,122	-				+1.4
3,304,122	-				-0.8
3,304,122	-				+0.4
3,304,122	-				+0.8
3,304,213	+				+0.5
3,304,214	-				+0.8
3,304,272	-				-0.8
3,304,412	-		Psyr_2722	0.18	-0.3
3,304,478	+		Psyr_2722	0.27	-2.8
3,304,479	-		Psyr_2722	0.27	-0.8
3,304,479	-		Psyr_2722	0.27	+1.0
3,304,530	+		Psyr_2722	0.34	+1.0
3,304,530	+		Psyr_2722	0.34	-0.8
3,304,530	+		Psyr_2722	0.34	+2.0
3,304,600	-		Psyr_2722	0.43	-0.4
3,304,600	-		Psyr_2722	0.43	+0.0
3,304,680	+		Psyr_2722	0.54	+1.0
3,304,680	+		Psyr_2722	0.54	-1.5
3,304,680	+		Psyr_2722	0.54	-0.2
3,304,680	+		Psyr_2722	0.54	-0.5
3,304,680	+		Psyr_2722	0.54	+0.8
3,304,680	+		Psyr_2722	0.54	-0.8
3,304,680	+		Psyr_2722	0.54	+2.2
3,304,680	+		Psyr_2722	0.54	+1.8
3,304,680	+		Psyr_2722	0.54	+0.8
3,304,680	+		Psyr_2722	0.54	+0.3
3,304,681	-		Psyr_2722	0.54	-0.0
3,304,681	-		Psyr_2722	0.54	-1.4
3,304,681	-		Psyr_2722	0.54	-0.5
3,304,681	-		Psyr_2722	0.54	+0.8
3,304,681	-		Psyr_2722	0.54	+1.8
3,304,681	-		Psyr_2722	0.54	+0.8
3,304,681	-		Psyr_2722	0.54	-1.0
3,304,681	-		Psyr_2722	0.54	+0.7
3,304,681	-		Psyr_2722	0.54	+1.2
3,304,681	-		Psyr_2722	0.54	+1.5
3,304,681	-		Psyr_2722	0.54	+0.5
3,304,681	-		Psyr_2722	0.54	+0.0
3,304,681	-		Psyr_2722	0.54	+1.5
3,304,798	+		Psyr_2722	0.69	-0.1
3,304,798	+		Psyr_2722	0.69	-0.2
3,304,798	+		Psyr_2722	0.69	+1.1
3,304,798	+		Psyr_2722	0.69	+1.3
3,304,798	+		Psyr_2722	0.69	+1.2
3,304,798	+		Psyr_2722	0.69	+4.5
3,304,798	+		Psyr_2722	0.69	+0.3
3,304,799	-		Psyr_2722	0.69	-0.4
3,304,942	+		Psyr_2722	0.88	-1.2
3,304,944	+		Psyr_2722	0.89	-0.2
3,304,944	+		Psyr_2722	0.89	+0.0
3,304,944	+		Psyr_2722	0.89	-2.2
3,304,944	+		Psyr_2722	0.89	-0.1
3,304,944	+		Psyr_2722	0.89	+0.0
3,304,944	+		Psyr_2722	0.89	-0.3
3,304,944	+		Psyr_2722	0.89	+0.3
3,304,944	+		Psyr_2722	0.89	-0.9
3,304,944	+		Psyr_2722	0.89	+0.2
3,304,944	+		Psyr_2722	0.89	-0.1
3,304,945	-		Psyr_2722	0.89	+1.0
3,304,945	-		Psyr_2722	0.89	+0.7
3,304,945	-		Psyr_2722	0.89	+0.8
3,304,945	-		Psyr_2722	0.89	+1.4
3,304,945	-		Psyr_2722	0.89	+1.5
3,304,945	-		Psyr_2722	0.89	+0.6
3,304,945	-		Psyr_2722	0.89	+0.1
3,304,945	-		Psyr_2722	0.89	-1.5
3,304,945	-		Psyr_2722	0.89	+0.0
3,304,945	-		Psyr_2722	0.89	-0.5
3,304,945	-		Psyr_2722	0.89	+3.1
3,304,945	-		Psyr_2722	0.89	-0.2
3,305,112	-				+1.4
3,305,117	+				+0.2
3,305,117	+				-0.8
3,305,184	+				+0.3
3,305,184	+				+1.5
3,305,184	+				+2.4
3,305,184	+				-0.5
3,305,184	+				+0.2
3,305,184	+				+0.5
3,305,185	-				+1.6
3,305,185	-				-0.5
3,305,185	-				-0.9
3,305,185	-				+0.5
3,305,185	-				-0.9
3,305,185	-				-0.4
3,305,185	-				+1.0
3,305,185	-				+1.8
3,305,185	-				-1.2
3,305,185	-				+0.5
3,305,185	-				+0.8
3,305,212	+				-0.4
3,305,313	+		Psyr_2723	0.14	+0.2
3,305,314	-		Psyr_2723	0.14	-0.4
3,305,395	+		Psyr_2723	0.23	-0.4
3,305,462	+		Psyr_2723	0.30	-0.4
3,305,483	-		Psyr_2723	0.32	+1.1
3,305,483	-		Psyr_2723	0.32	-0.3
3,305,483	-		Psyr_2723	0.32	+0.4
3,305,652	+		Psyr_2723	0.51	-1.2
3,305,656	-		Psyr_2723	0.51	-2.2
3,305,656	-		Psyr_2723	0.51	-1.2
3,305,761	+		Psyr_2723	0.63	-0.6
3,305,761	+		Psyr_2723	0.63	+0.3
3,305,761	+		Psyr_2723	0.63	-1.3
3,305,762	-		Psyr_2723	0.63	-3.0
3,305,762	-		Psyr_2723	0.63	+0.5
3,305,762	-		Psyr_2723	0.63	+1.0
3,305,762	-		Psyr_2723	0.63	+1.4
3,305,762	-		Psyr_2723	0.63	-0.8
3,305,763	+		Psyr_2723	0.63	-1.1