Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2688

Experiment: KB with Erythromycin 25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Erythromycin 25 ug/ml
3,262,660	+		Psyr_2687	0.37	-0.1
3,262,660	+		Psyr_2687	0.37	+0.4
3,262,660	+		Psyr_2687	0.37	+0.2
3,262,661	-		Psyr_2687	0.37	+0.5
3,262,661	-		Psyr_2687	0.37	-0.5
3,262,744	+		Psyr_2687	0.43	-1.8
3,262,744	+		Psyr_2687	0.43	+1.2
3,262,744	+		Psyr_2687	0.43	-0.4
3,262,744	+		Psyr_2687	0.43	-0.7
3,262,744	+		Psyr_2687	0.43	-0.7
3,262,744	+		Psyr_2687	0.43	-0.5
3,262,745	-		Psyr_2687	0.43	+0.2
3,262,745	-		Psyr_2687	0.43	-0.8
3,262,745	-		Psyr_2687	0.43	+1.2
3,262,745	-		Psyr_2687	0.43	+0.7
3,262,774	+		Psyr_2687	0.45	-0.3
3,262,774	+		Psyr_2687	0.45	-0.8
3,262,774	+		Psyr_2687	0.45	+0.9
3,262,774	+		Psyr_2687	0.45	+0.4
3,262,774	+		Psyr_2687	0.45	+0.0
3,262,775	-		Psyr_2687	0.45	+1.7
3,262,775	-		Psyr_2687	0.45	-1.2
3,262,775	-		Psyr_2687	0.45	+0.3
3,262,775	-		Psyr_2687	0.45	+0.0
3,262,775	-		Psyr_2687	0.45	-0.8
3,262,840	-		Psyr_2687	0.50	-1.3
3,262,850	+		Psyr_2687	0.51	+0.1
3,262,872	+		Psyr_2687	0.52	+1.7
3,262,873	-		Psyr_2687	0.52	-0.6
3,262,873	-		Psyr_2687	0.52	-1.0
3,263,055	+		Psyr_2687	0.65	+0.0
3,263,055	+		Psyr_2687	0.65	-0.1
3,263,055	+		Psyr_2687	0.65	+1.7
3,263,055	+		Psyr_2687	0.65	+0.3
3,263,123	+		Psyr_2687	0.70	+0.9
3,263,124	-		Psyr_2687	0.70	-0.3
3,263,139	+		Psyr_2687	0.71	+0.1
3,263,140	-		Psyr_2687	0.71	+0.7
3,263,140	-		Psyr_2687	0.71	+0.6
3,263,373	+		Psyr_2687	0.88	+1.2
3,263,373	+		Psyr_2687	0.88	-1.8
3,263,407	-				+0.7
3,263,407	-				+0.0
3,263,453	+				+0.7
3,263,464	-				-0.3
3,263,464	-				+1.0
3,263,539	+				+1.3
3,263,539	+				-0.8
3,263,540	-				+0.7
3,263,540	-				-0.9
3,263,555	+				-1.7
3,263,555	+				-0.5
3,263,555	+				+0.2
3,263,555	+				+0.7
3,263,555	+				-0.6
3,263,556	-				+0.2
3,263,556	-				-0.1
3,263,556	-				-0.5
3,263,556	-				+1.5
3,263,556	-				-0.3
3,263,556	-				+1.7
3,263,556	-				-0.3
3,263,556	-				+0.6
3,263,594	+				+0.1
3,263,603	+				+0.2
3,263,649	+				-0.2
3,263,681	-				+0.0
3,263,681	-				-0.3
3,263,681	-				+0.7
3,263,681	-				-0.8
3,263,682	+				+2.3
3,263,682	+				-0.8
3,263,682	+				-2.0
3,263,682	+				-0.6
3,263,682	+				-0.8
3,263,682	+				+0.2
3,263,682	+				-1.1
3,263,683	-				-1.3
3,263,683	-				-0.1
3,263,683	-				-0.2
3,263,683	-				+0.2
3,263,683	-				-0.8
3,263,683	-				-0.8
3,263,896	+		Psyr_2688	0.60	-1.5
3,263,896	+		Psyr_2688	0.60	-2.1
3,263,896	+		Psyr_2688	0.60	-1.0
3,263,896	+		Psyr_2688	0.60	+1.7
3,263,896	+		Psyr_2688	0.60	-0.8
3,263,896	+		Psyr_2688	0.60	+0.2
3,263,897	-		Psyr_2688	0.61	+0.3
3,263,897	-		Psyr_2688	0.61	-0.6
3,263,897	-		Psyr_2688	0.61	+0.7
3,263,897	-		Psyr_2688	0.61	-1.6
3,263,897	-		Psyr_2688	0.61	+0.0
3,264,012	+		Psyr_2688	0.89	-1.0
3,264,013	-		Psyr_2688	0.89	-0.6
3,264,013	-		Psyr_2688	0.89	+0.3
3,264,013	-		Psyr_2688	0.89	-2.0
3,264,013	-		Psyr_2688	0.89	-0.8
3,264,090	-				+0.0
3,264,274	+				+0.2
3,264,274	+				-1.0
3,264,274	+				+0.3
3,264,274	+				-3.5
3,264,275	-				-1.3
3,264,275	-				+0.4
3,264,325	+				-0.4
3,264,325	+				-0.6
3,264,326	-				-0.2
3,264,326	-				-0.8
3,264,326	-				+0.1
3,264,326	-				-0.9
3,264,326	-				+0.5
3,264,333	-				-1.9
3,264,333	-				+1.3
3,264,437	+				-1.3
3,264,486	-				+0.5
3,264,486	-				+0.3
3,264,488	-				+0.6
3,264,488	-				+0.3
3,264,489	+				+0.6
3,264,489	+				-1.3
3,264,489	+				+0.3
3,264,489	+				-1.6
3,264,489	+				+0.7
3,264,489	+				+0.0
3,264,490	-				+0.6
3,264,490	-				-0.1
3,264,490	-				+0.7
3,264,490	-				-1.4
3,264,490	-				-0.6
3,264,491	+				-0.4
3,264,491	+				-0.3
3,264,491	+				-1.7
3,264,491	+				-0.3
3,264,492	-				+0.4
3,264,492	-				-0.3
3,264,492	-				-0.5
3,264,585	-				+1.3
3,264,751	+				-0.8
3,264,751	+				-0.6
3,264,752	-				+0.7
3,264,807	+				+1.3
3,264,807	+				+0.9
3,264,807	+				-0.8
3,264,808	-				+0.0
3,264,808	-				-0.8
3,264,851	+				+1.1
3,264,851	+				-0.1
3,264,851	+				-0.3
3,264,856	+				-1.1
3,264,908	+				+1.3
3,264,917	-				+0.1
3,264,928	+				+0.6
3,264,953	+				+0.7
3,264,953	+				-0.3
3,264,953	+				-1.5
3,264,953	+				-0.5
3,264,954	-				-1.2
3,264,954	-				+0.1
3,264,954	-				-0.7
3,264,954	-				-0.7
3,265,004	-				-0.7
3,265,020	+				-0.3