Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2486

Experiment: KB with Erythromycin 25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Erythromycin 25 ug/ml
2,887,954	-		Psyr_2485	0.66	+0.1
2,887,994	+		Psyr_2485	0.69	+1.1
2,887,995	-		Psyr_2485	0.69	-0.3
2,888,000	+		Psyr_2485	0.69	+0.7
2,888,000	+		Psyr_2485	0.69	-3.2
2,888,000	+		Psyr_2485	0.69	-0.9
2,888,000	+		Psyr_2485	0.69	-1.3
2,888,001	-		Psyr_2485	0.69	+0.1
2,888,001	-		Psyr_2485	0.69	-0.3
2,888,119	-		Psyr_2485	0.77	+0.9
2,888,119	-		Psyr_2485	0.77	-0.1
2,888,181	+		Psyr_2485	0.82	-1.3
2,888,181	+		Psyr_2485	0.82	-0.5
2,888,181	+		Psyr_2485	0.82	-0.3
2,888,181	+		Psyr_2485	0.82	-1.1
2,888,181	+		Psyr_2485	0.82	+0.3
2,888,182	-		Psyr_2485	0.82	+0.4
2,888,182	-		Psyr_2485	0.82	-1.6
2,888,182	-		Psyr_2485	0.82	-0.9
2,888,182	-		Psyr_2485	0.82	+0.5
2,888,182	-		Psyr_2485	0.82	-0.9
2,888,182	-		Psyr_2485	0.82	-0.7
2,888,200	+		Psyr_2485	0.83	-0.8
2,888,201	-		Psyr_2485	0.83	+0.4
2,888,202	+		Psyr_2485	0.83	-0.7
2,888,277	+		Psyr_2485	0.88	-1.1
2,888,277	+		Psyr_2485	0.88	-1.0
2,888,277	+		Psyr_2485	0.88	-0.7
2,888,278	-		Psyr_2485	0.88	-0.1
2,888,448	+				-1.1
2,888,448	+				+0.2
2,888,452	+				+0.1
2,888,512	-				-2.3
2,888,565	-				+1.6
2,888,565	-				-0.3
2,888,619	+				-0.5
2,888,620	-				-2.5
2,888,635	+				-0.4
2,888,635	+				-0.3
2,888,636	-				+0.7
2,888,636	-				-0.0
2,888,636	-				-1.9
2,888,636	-				-0.1
2,888,636	-				-0.7
2,888,636	-				-0.1
2,888,636	-				+0.3
2,888,636	-				-0.1
2,888,636	-				-0.1
2,888,636	-				-2.4
2,888,820	-				-1.3
2,888,986	+		Psyr_2486	0.17	-0.5
2,888,986	+		Psyr_2486	0.17	+0.7
2,888,986	+		Psyr_2486	0.17	+0.6
2,889,009	+		Psyr_2486	0.18	+0.2
2,889,010	-		Psyr_2486	0.18	+0.3
2,889,130	+		Psyr_2486	0.24	+0.2
2,889,131	-		Psyr_2486	0.24	-0.2
2,889,187	+		Psyr_2486	0.27	+0.9
2,889,187	+		Psyr_2486	0.27	-1.3
2,889,188	-		Psyr_2486	0.27	+2.1
2,889,739	-		Psyr_2486	0.53	+0.1
2,889,847	+		Psyr_2486	0.58	-0.3
2,889,847	+		Psyr_2486	0.58	+1.5
2,889,847	+		Psyr_2486	0.58	-1.3
2,889,848	-		Psyr_2486	0.58	-1.1
2,889,972	+		Psyr_2486	0.64	-1.3
2,889,973	-		Psyr_2486	0.64	+0.3
2,889,976	+		Psyr_2486	0.64	-0.7
2,889,976	+		Psyr_2486	0.64	-0.5
2,889,976	+		Psyr_2486	0.64	-1.0
2,889,976	+		Psyr_2486	0.64	-1.4
2,889,976	+		Psyr_2486	0.64	-2.1
2,889,976	+		Psyr_2486	0.64	+0.4
2,889,977	-		Psyr_2486	0.64	+1.7
2,889,977	-		Psyr_2486	0.64	-0.7
2,890,016	+		Psyr_2486	0.66	-0.9
2,890,165	+		Psyr_2486	0.73	-1.4
2,890,165	+		Psyr_2486	0.73	-1.3
2,890,165	+		Psyr_2486	0.73	+1.7
2,890,420	+		Psyr_2486	0.85	-0.8
2,890,420	+		Psyr_2486	0.85	-0.0
2,890,420	+		Psyr_2486	0.85	+0.7
2,890,816	-				-1.6
2,890,816	-				-0.3
2,890,816	-				+0.3
2,890,939	+		Psyr_2487	0.13	-0.3
2,890,939	+		Psyr_2487	0.13	-1.2
2,890,940	-		Psyr_2487	0.13	-1.0
2,891,264	+		Psyr_2487	0.56	-1.3
2,891,264	+		Psyr_2487	0.56	-1.6
2,891,265	-		Psyr_2487	0.56	-1.7
2,891,396	+		Psyr_2487	0.74	-3.2
2,891,396	+		Psyr_2487	0.74	+0.7
2,891,548	+				-0.5
2,891,549	-				+1.3
2,891,549	-				+1.1