Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2130

Experiment: KB with Erythromycin 25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Erythromycin 25 ug/ml
2,488,663	+		Psyr_2129	0.84	+0.8
2,488,664	-		Psyr_2129	0.84	+0.1
2,488,696	-		Psyr_2129	0.87	+1.8
2,488,696	-		Psyr_2129	0.87	+0.3
2,488,735	+		Psyr_2129	0.90	-0.6
2,488,735	+		Psyr_2129	0.90	+0.2
2,488,736	-		Psyr_2129	0.90	-0.3
2,488,736	-		Psyr_2129	0.90	+1.5
2,488,736	-		Psyr_2129	0.90	+1.1
2,488,736	-		Psyr_2129	0.90	+0.8
2,488,736	-		Psyr_2129	0.90	+0.8
2,488,736	-		Psyr_2129	0.90	+1.0
2,488,736	-		Psyr_2129	0.90	+0.1
2,488,866	-				+0.8
2,488,880	-				-0.6
2,488,954	+				+0.5
2,488,992	-				+0.6
2,488,992	-				+1.1
2,489,051	-				-0.8
2,489,051	-				-0.1
2,489,291	+				+0.1
2,489,292	-				-0.4
2,489,308	-				+2.4
2,489,371	-				-0.3
2,489,389	+				+0.5
2,489,390	-				+0.5
2,489,390	-				+0.8
2,489,390	-				-0.0
2,489,390	-				+0.4
2,489,600	+				-0.2
2,489,600	+				-0.4
2,489,601	-				+0.2
2,489,601	-				+0.4
2,489,601	-				-0.0
2,489,967	+		Psyr_2130	0.25	+1.4
2,490,182	+		Psyr_2130	0.36	+0.4
2,490,183	-		Psyr_2130	0.36	+1.5
2,490,275	+		Psyr_2130	0.41	+0.1
2,490,276	-		Psyr_2130	0.41	-0.0
2,490,365	+		Psyr_2130	0.46	+1.6
2,490,365	+		Psyr_2130	0.46	+1.1
2,490,365	+		Psyr_2130	0.46	-1.2
2,490,365	+		Psyr_2130	0.46	-0.8
2,490,365	+		Psyr_2130	0.46	+0.1
2,490,366	-		Psyr_2130	0.46	-2.0
2,490,366	-		Psyr_2130	0.46	-0.0
2,490,366	-		Psyr_2130	0.46	+0.2
2,490,366	-		Psyr_2130	0.46	-0.2
2,490,366	-		Psyr_2130	0.46	-1.0
2,490,366	-		Psyr_2130	0.46	+0.6
2,490,366	-		Psyr_2130	0.46	-0.2
2,490,366	-		Psyr_2130	0.46	+0.5
2,490,366	-		Psyr_2130	0.46	-0.4
2,490,366	-		Psyr_2130	0.46	+0.6
2,490,366	-		Psyr_2130	0.46	-0.5
2,490,366	-		Psyr_2130	0.46	+1.1
2,490,366	-		Psyr_2130	0.46	-0.3
2,490,530	+		Psyr_2130	0.55	+0.4
2,490,531	-		Psyr_2130	0.55	+0.3
2,490,716	+		Psyr_2130	0.64	+0.5
2,490,716	+		Psyr_2130	0.64	+0.2
2,490,716	+		Psyr_2130	0.64	-0.1
2,490,716	+		Psyr_2130	0.64	+0.1
2,490,716	+		Psyr_2130	0.64	-0.6
2,490,716	+		Psyr_2130	0.64	-0.2
2,490,716	+		Psyr_2130	0.64	+1.2
2,490,717	-		Psyr_2130	0.64	+1.1
2,490,867	-		Psyr_2130	0.72	+1.8
2,491,029	-		Psyr_2130	0.81	+0.0
2,491,087	-		Psyr_2130	0.84	+1.1
2,491,111	-		Psyr_2130	0.85	+0.8
2,491,136	+		Psyr_2130	0.86	-0.6
2,491,136	+		Psyr_2130	0.86	-0.1
2,491,137	-		Psyr_2130	0.86	+0.2
2,491,137	-		Psyr_2130	0.86	+0.8
2,491,137	-		Psyr_2130	0.86	+0.7
2,491,139	+		Psyr_2130	0.86	+1.0
2,491,139	+		Psyr_2130	0.86	-1.1
2,491,140	-		Psyr_2130	0.87	-0.2
2,491,140	-		Psyr_2130	0.87	+1.5
2,491,140	-		Psyr_2130	0.87	+0.6
2,491,197	-		Psyr_2130	0.90	+0.8
2,491,199	+		Psyr_2130	0.90	-0.6
2,491,199	+		Psyr_2130	0.90	+1.5
2,491,200	-		Psyr_2130	0.90	-0.3
2,491,200	-		Psyr_2130	0.90	+0.7
2,491,200	-		Psyr_2130	0.90	+0.2
2,491,200	-		Psyr_2130	0.90	+0.4
2,491,200	-		Psyr_2130	0.90	+1.6
2,491,200	-		Psyr_2130	0.90	+1.6
2,491,200	-		Psyr_2130	0.90	+0.8
2,491,200	-		Psyr_2130	0.90	+0.0
2,491,212	-				+1.6
2,491,471	-				-0.8
2,491,678	+		Psyr_2131	0.26	-0.7
2,491,678	+		Psyr_2131	0.26	-0.9
2,491,678	+		Psyr_2131	0.26	-1.5
2,491,678	+		Psyr_2131	0.26	-0.8
2,491,678	+		Psyr_2131	0.26	+0.8
2,491,678	+		Psyr_2131	0.26	-1.2
2,491,678	+		Psyr_2131	0.26	+2.1
2,491,678	+		Psyr_2131	0.26	+0.6
2,491,678	+		Psyr_2131	0.26	-0.3
2,491,678	+		Psyr_2131	0.26	-0.4
2,491,678	+		Psyr_2131	0.26	+0.2
2,491,678	+		Psyr_2131	0.26	-0.3
2,491,679	-		Psyr_2131	0.27	+0.5
2,491,679	-		Psyr_2131	0.27	+0.7
2,491,679	-		Psyr_2131	0.27	+0.0
2,491,679	-		Psyr_2131	0.27	+0.2
2,491,679	-		Psyr_2131	0.27	-0.2
2,491,679	-		Psyr_2131	0.27	-0.0
2,491,679	-		Psyr_2131	0.27	+1.2
2,491,679	-		Psyr_2131	0.27	+0.2
2,491,679	-		Psyr_2131	0.27	+1.8
2,491,679	-		Psyr_2131	0.27	-1.3
2,491,679	-		Psyr_2131	0.27	-0.2
2,491,679	-		Psyr_2131	0.27	+1.1
2,491,681	+		Psyr_2131	0.27	+0.3
2,491,681	+		Psyr_2131	0.27	-0.1
2,491,682	-		Psyr_2131	0.27	-0.2
2,491,682	-		Psyr_2131	0.27	-0.4
2,491,684	+		Psyr_2131	0.27	+0.8
2,491,684	+		Psyr_2131	0.27	-0.2
2,491,684	+		Psyr_2131	0.27	-0.2
2,491,708	+		Psyr_2131	0.31	+1.0
2,491,708	+		Psyr_2131	0.31	-0.5
2,491,709	-		Psyr_2131	0.31	-0.9
2,492,146	+				+0.5
2,492,166	-				-0.3
2,492,166	-				+0.2
2,492,166	-				-0.0
2,492,166	-				-0.8
2,492,166	-				+0.4
2,492,327	+		Psyr_2132	0.19	-0.8
2,492,328	-		Psyr_2132	0.19	+1.1