Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1859

Experiment: KB with Erythromycin 25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Erythromycin 25 ug/ml
2,135,373	+				-1.0
2,135,373	+				-0.2
2,135,382	-				-0.5
2,135,382	-				-0.2
2,135,382	-				-1.3
2,135,493	+				+0.8
2,135,493	+				-0.6
2,135,493	+				+1.5
2,135,493	+				+0.7
2,135,494	-				-2.9
2,135,494	-				-1.2
2,135,494	-				+0.7
2,135,673	-		Psyr_1858	0.30	+0.4
2,135,783	+		Psyr_1858	0.45	+1.1
2,135,783	+		Psyr_1858	0.45	+3.4
2,135,783	+		Psyr_1858	0.45	+0.1
2,135,783	+		Psyr_1858	0.45	-0.4
2,135,784	-		Psyr_1858	0.45	-0.3
2,135,828	+		Psyr_1858	0.51	-1.2
2,135,828	+		Psyr_1858	0.51	-0.4
2,135,829	-		Psyr_1858	0.52	-0.2
2,135,834	+		Psyr_1858	0.52	-1.0
2,135,834	+		Psyr_1858	0.52	+0.8
2,135,836	+		Psyr_1858	0.53	-2.6
2,135,878	+		Psyr_1858	0.58	+1.1
2,135,878	+		Psyr_1858	0.58	+0.5
2,135,921	+		Psyr_1858	0.64	+2.4
2,135,921	+		Psyr_1858	0.64	-0.3
2,136,089	+		Psyr_1858	0.88	-0.3
2,136,089	+		Psyr_1858	0.88	+0.8
2,136,089	+		Psyr_1858	0.88	+1.9
2,136,090	-		Psyr_1858	0.88	+2.2
2,136,090	-		Psyr_1858	0.88	-0.5
2,136,107	+				-1.8
2,136,108	-				-0.8
2,136,255	-				-0.2
2,136,302	+				-0.5
2,136,302	+				+0.3
2,136,434	+		Psyr_1859	0.52	-0.0
2,136,434	+		Psyr_1859	0.52	+0.3
2,136,435	-		Psyr_1859	0.52	+1.6
2,136,460	-		Psyr_1859	0.61	+1.0
2,136,524	+		Psyr_1859	0.84	+1.1
2,136,559	-				-1.0
2,136,609	+				-0.9
2,136,609	+				+0.6
2,136,610	-				+1.8
2,136,612	+				-0.8
2,136,613	-				+0.6
2,136,613	-				+1.2
2,136,908	+				-0.1
2,136,908	+				-0.2
2,136,908	+				-1.2
2,136,909	-				-0.5
2,136,909	-				+0.3
2,136,912	+				-1.5
2,136,913	-				-1.1
2,136,923	-				-1.2
2,137,097	+		Psyr_1860	0.34	-1.5
2,137,097	+		Psyr_1860	0.34	+0.3
2,137,097	+		Psyr_1860	0.34	+0.8
2,137,097	+		Psyr_1860	0.34	-0.9
2,137,098	-		Psyr_1860	0.34	-1.8
2,137,098	-		Psyr_1860	0.34	-2.8
2,137,249	-		Psyr_1860	0.61	+0.2
2,137,249	-		Psyr_1860	0.61	-0.4
2,137,249	-		Psyr_1860	0.61	+1.0
2,137,249	-		Psyr_1860	0.61	-1.5
2,137,249	-		Psyr_1860	0.61	+1.7
2,137,249	-		Psyr_1860	0.61	-0.7
2,137,249	-		Psyr_1860	0.61	+0.1
2,137,314	+		Psyr_1860	0.73	-0.2
2,137,315	-		Psyr_1860	0.73	-1.6
2,137,493	+				+0.7
2,137,494	-				-0.8
2,137,494	-				+0.5
2,137,494	-				+0.3
2,137,494	-				+0.1
2,137,511	-				-0.6
2,137,511	-				+0.7
2,137,511	-				+0.8