Experiment: KB with Erythromycin 25 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_1303 and Psyr_1304 are separated by 7 nucleotides Psyr_1304 and Psyr_1305 overlap by 4 nucleotides
Psyr_1303: Psyr_1303 - Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer, at 1,478,451 to 1,480,073
_1303
Psyr_1304: Psyr_1304 - CheW-like protein, at 1,480,081 to 1,480,617
_1304
Psyr_1305: Psyr_1305 - MCP methyltransferase, CheR-type, at 1,480,614 to 1,481,894
_1305
Position (kb) 1480
1481 Strain fitness (log2 ratio) -1
0
1
2 at 1479.651 kb on + strand, within Psyr_1303 at 1479.720 kb on + strand, within Psyr_1303 at 1479.720 kb on + strand, within Psyr_1303 at 1479.720 kb on + strand, within Psyr_1303 at 1479.720 kb on + strand, within Psyr_1303 at 1479.720 kb on + strand, within Psyr_1303 at 1479.721 kb on - strand, within Psyr_1303 at 1479.721 kb on - strand, within Psyr_1303 at 1479.721 kb on - strand, within Psyr_1303 at 1480.152 kb on - strand, within Psyr_1304 at 1480.336 kb on - strand, within Psyr_1304 at 1480.454 kb on - strand, within Psyr_1304 at 1480.570 kb on + strand at 1480.570 kb on + strand at 1480.752 kb on + strand, within Psyr_1305 at 1480.951 kb on - strand, within Psyr_1305 at 1481.106 kb on + strand, within Psyr_1305 at 1481.161 kb on + strand, within Psyr_1305 at 1481.162 kb on - strand, within Psyr_1305 at 1481.178 kb on - strand, within Psyr_1305 at 1481.214 kb on + strand, within Psyr_1305 at 1481.214 kb on + strand, within Psyr_1305 at 1481.247 kb on + strand, within Psyr_1305 at 1481.247 kb on + strand, within Psyr_1305 at 1481.247 kb on + strand, within Psyr_1305 at 1481.248 kb on - strand, within Psyr_1305 at 1481.248 kb on - strand, within Psyr_1305 at 1481.248 kb on - strand, within Psyr_1305 at 1481.248 kb on - strand, within Psyr_1305 at 1481.248 kb on - strand, within Psyr_1305 at 1481.578 kb on + strand, within Psyr_1305
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Erythromycin 25 ug/ml remove 1,479,651 + Psyr_1303 0.74 +0.8 1,479,720 + Psyr_1303 0.78 -0.5 1,479,720 + Psyr_1303 0.78 +1.6 1,479,720 + Psyr_1303 0.78 -0.3 1,479,720 + Psyr_1303 0.78 +0.6 1,479,720 + Psyr_1303 0.78 -0.2 1,479,721 - Psyr_1303 0.78 -0.0 1,479,721 - Psyr_1303 0.78 +1.6 1,479,721 - Psyr_1303 0.78 +0.1 1,480,152 - Psyr_1304 0.13 -0.8 1,480,336 - Psyr_1304 0.47 -0.8 1,480,454 - Psyr_1304 0.69 -1.2 1,480,570 + -0.1 1,480,570 + +1.3 1,480,752 + Psyr_1305 0.11 +0.2 1,480,951 - Psyr_1305 0.26 +0.9 1,481,106 + Psyr_1305 0.38 -0.9 1,481,161 + Psyr_1305 0.43 -0.2 1,481,162 - Psyr_1305 0.43 +2.0 1,481,178 - Psyr_1305 0.44 +0.4 1,481,214 + Psyr_1305 0.47 -0.1 1,481,214 + Psyr_1305 0.47 -0.0 1,481,247 + Psyr_1305 0.49 -0.6 1,481,247 + Psyr_1305 0.49 +0.6 1,481,247 + Psyr_1305 0.49 +0.6 1,481,248 - Psyr_1305 0.49 -0.2 1,481,248 - Psyr_1305 0.49 +0.4 1,481,248 - Psyr_1305 0.49 +0.5 1,481,248 - Psyr_1305 0.49 +1.0 1,481,248 - Psyr_1305 0.49 -0.6 1,481,578 + Psyr_1305 0.75 -0.6
Or see this region's nucleotide sequence