Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0827

Experiment: KB with Erythromycin 25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Erythromycin 25 ug/ml
935,900	+		Psyr_0826	0.59	-1.3
935,943	+		Psyr_0826	0.61	+1.5
936,039	-		Psyr_0826	0.67	-1.3
936,039	-		Psyr_0826	0.67	-0.8
936,221	-		Psyr_0826	0.78	+0.4
936,333	-		Psyr_0826	0.85	+0.1
936,333	-		Psyr_0826	0.85	+0.1
936,581	+				+1.8
936,582	-				+0.8
936,605	+				-0.2
936,605	+				+0.1
936,687	-				-1.3
936,710	+				+1.9
936,710	+				+1.1
936,710	+				-0.9
936,710	+				-0.5
936,710	+				+1.1
936,710	+				+0.7
936,711	-				-0.3
936,711	-				+0.6
936,711	-				+0.7
936,711	-				+0.3
936,711	-				-0.7
936,711	-				+3.4
936,711	-				-0.9
936,762	+				+0.5
936,817	+				-0.4
936,817	+				-1.3
936,817	+				+0.1
936,817	+				+0.6
936,818	-				-0.1
936,818	-				-0.4
936,818	-				-0.3
936,818	-				-0.5
936,818	-				-0.4
936,818	-				+0.6
936,818	-				+0.3
936,970	-		Psyr_0827	0.15	-0.5
937,080	+		Psyr_0827	0.28	+0.1
937,081	-		Psyr_0827	0.28	-2.1
937,161	-		Psyr_0827	0.37	-1.1
937,398	+		Psyr_0827	0.65	-0.7
937,482	+		Psyr_0827	0.75	-0.6
937,482	+		Psyr_0827	0.75	-0.6
937,482	+		Psyr_0827	0.75	-2.2
937,483	-		Psyr_0827	0.75	-0.7
937,531	+		Psyr_0827	0.81	-1.3
937,683	-				-1.6
937,748	+				-0.3
937,749	-				-0.5
938,311	-		Psyr_0828	0.78	-0.3
938,417	+				-1.5
938,473	-				+0.7
938,479	+				+0.7
938,479	+				+0.1
938,480	-				-0.7
938,480	-				-0.5
938,492	+				-0.9
938,492	+				-0.3
938,492	+				+0.2
938,492	+				-0.9
938,492	+				-2.5
938,492	+				-1.1
938,492	+				+0.1
938,492	+				+1.5
938,492	+				+0.1
938,492	+				+0.8
938,492	+				-0.7
938,492	+				+1.2
938,492	+				+0.3
938,493	-				+1.1
938,493	-				-1.0
938,493	-				-2.1
938,493	-				-0.6
938,493	-				+0.1
938,493	-				+0.4
938,493	-				-0.3
938,493	-				+0.6
938,493	-				-0.6
938,493	-				+0.4
938,493	-				+0.9
938,493	-				-0.8
938,493	-				-1.6
938,633	+				-0.1
938,634	-				-0.8
938,634	-				+0.5
938,673	+				-0.0
938,673	+				-0.6
938,673	+				+1.6
938,674	-				+0.1
938,693	+				+0.8