Experiment: KB with Erythromycin 25 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0430 and Psyr_0431 overlap by 4 nucleotides Psyr_0431 and Psyr_0432 are separated by 54 nucleotides Psyr_0432 and Psyr_0433 overlap by 4 nucleotides Psyr_0433 and Psyr_0434 overlap by 8 nucleotides
Psyr_0430: Psyr_0430 - conserved hypothetical protein, at 470,002 to 470,616
_0430
Psyr_0431: Psyr_0431 - Thioesterase superfamily, at 470,613 to 471,062
_0431
Psyr_0432: Psyr_0432 - conserved hypothetical protein, at 471,117 to 472,064
_0432
Psyr_0433: Psyr_0433 - Glycosyl transferase, family 2, at 472,061 to 472,795
_0433
Psyr_0434: Psyr_0434 - AMP-dependent synthetase and ligase, at 472,788 to 474,479
_0434
Position (kb) 471
472
473 Strain fitness (log2 ratio) -2
-1
0
1
2 at 470.632 kb on - strand at 470.632 kb on - strand at 470.729 kb on + strand, within Psyr_0431 at 470.730 kb on - strand, within Psyr_0431 at 470.858 kb on - strand, within Psyr_0431 at 470.858 kb on - strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.914 kb on + strand, within Psyr_0431 at 470.915 kb on - strand, within Psyr_0431 at 470.915 kb on - strand, within Psyr_0431 at 470.915 kb on - strand, within Psyr_0431 at 470.915 kb on - strand, within Psyr_0431 at 470.915 kb on - strand, within Psyr_0431 at 470.915 kb on - strand, within Psyr_0431 at 470.915 kb on - strand, within Psyr_0431 at 470.915 kb on - strand, within Psyr_0431 at 470.915 kb on - strand, within Psyr_0431 at 470.915 kb on - strand, within Psyr_0431 at 470.918 kb on + strand, within Psyr_0431 at 470.918 kb on + strand, within Psyr_0431 at 470.919 kb on - strand, within Psyr_0431 at 470.919 kb on - strand, within Psyr_0431 at 470.919 kb on - strand, within Psyr_0431 at 470.962 kb on + strand, within Psyr_0431 at 470.962 kb on + strand, within Psyr_0431 at 470.962 kb on + strand, within Psyr_0431 at 470.971 kb on + strand, within Psyr_0431 at 470.971 kb on + strand, within Psyr_0431 at 470.972 kb on - strand, within Psyr_0431 at 470.972 kb on - strand, within Psyr_0431 at 470.972 kb on - strand, within Psyr_0431 at 471.064 kb on + strand at 471.064 kb on + strand at 471.064 kb on + strand at 471.064 kb on + strand at 471.064 kb on + strand at 471.065 kb on - strand at 471.065 kb on - strand at 471.065 kb on - strand at 471.093 kb on + strand at 471.093 kb on + strand at 471.093 kb on + strand at 471.094 kb on - strand at 471.094 kb on - strand at 471.094 kb on - strand at 471.094 kb on - strand at 471.094 kb on - strand at 471.878 kb on - strand, within Psyr_0432 at 471.923 kb on - strand, within Psyr_0432 at 471.923 kb on - strand, within Psyr_0432 at 471.923 kb on - strand, within Psyr_0432 at 471.937 kb on + strand, within Psyr_0432 at 472.192 kb on - strand, within Psyr_0433 at 472.399 kb on - strand, within Psyr_0433 at 472.407 kb on + strand, within Psyr_0433 at 472.408 kb on - strand, within Psyr_0433 at 472.629 kb on + strand, within Psyr_0433 at 472.629 kb on + strand, within Psyr_0433 at 472.630 kb on - strand, within Psyr_0433 at 472.630 kb on - strand, within Psyr_0433 at 472.630 kb on - strand, within Psyr_0433 at 472.630 kb on - strand, within Psyr_0433 at 472.630 kb on - strand, within Psyr_0433 at 472.634 kb on - strand, within Psyr_0433 at 472.658 kb on + strand, within Psyr_0433 at 472.789 kb on + strand at 472.789 kb on + strand at 472.789 kb on + strand at 472.789 kb on + strand at 472.789 kb on + strand at 472.789 kb on + strand at 472.789 kb on + strand at 472.790 kb on - strand at 472.790 kb on - strand at 472.790 kb on - strand at 472.790 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Erythromycin 25 ug/ml remove 470,632 - +0.6 470,632 - +0.7 470,729 + Psyr_0431 0.26 -1.1 470,730 - Psyr_0431 0.26 -0.2 470,858 - Psyr_0431 0.54 -0.8 470,858 - Psyr_0431 0.54 +1.0 470,914 + Psyr_0431 0.67 -0.9 470,914 + Psyr_0431 0.67 -0.6 470,914 + Psyr_0431 0.67 -1.3 470,914 + Psyr_0431 0.67 +0.2 470,914 + Psyr_0431 0.67 +0.8 470,914 + Psyr_0431 0.67 +0.2 470,914 + Psyr_0431 0.67 +0.3 470,914 + Psyr_0431 0.67 +0.0 470,914 + Psyr_0431 0.67 +0.1 470,914 + Psyr_0431 0.67 -1.2 470,914 + Psyr_0431 0.67 -0.8 470,914 + Psyr_0431 0.67 -0.8 470,914 + Psyr_0431 0.67 -2.6 470,914 + Psyr_0431 0.67 -0.7 470,914 + Psyr_0431 0.67 -0.2 470,914 + Psyr_0431 0.67 +1.2 470,914 + Psyr_0431 0.67 -0.2 470,914 + Psyr_0431 0.67 +0.2 470,914 + Psyr_0431 0.67 +0.4 470,915 - Psyr_0431 0.67 +0.1 470,915 - Psyr_0431 0.67 +1.2 470,915 - Psyr_0431 0.67 +0.5 470,915 - Psyr_0431 0.67 -0.4 470,915 - Psyr_0431 0.67 -0.2 470,915 - Psyr_0431 0.67 -1.5 470,915 - Psyr_0431 0.67 +0.8 470,915 - Psyr_0431 0.67 +0.2 470,915 - Psyr_0431 0.67 -1.1 470,915 - Psyr_0431 0.67 -0.2 470,918 + Psyr_0431 0.68 +1.4 470,918 + Psyr_0431 0.68 -0.2 470,919 - Psyr_0431 0.68 -0.0 470,919 - Psyr_0431 0.68 -0.8 470,919 - Psyr_0431 0.68 -0.2 470,962 + Psyr_0431 0.78 -1.4 470,962 + Psyr_0431 0.78 +0.5 470,962 + Psyr_0431 0.78 -0.4 470,971 + Psyr_0431 0.80 -1.0 470,971 + Psyr_0431 0.80 +0.6 470,972 - Psyr_0431 0.80 -0.2 470,972 - Psyr_0431 0.80 -0.6 470,972 - Psyr_0431 0.80 -2.5 471,064 + -0.3 471,064 + -0.8 471,064 + +0.3 471,064 + -1.6 471,064 + +0.8 471,065 - +2.2 471,065 - -0.4 471,065 - +0.9 471,093 + +1.4 471,093 + +0.7 471,093 + -0.4 471,094 - +0.3 471,094 - -0.4 471,094 - -1.1 471,094 - +1.0 471,094 - -0.0 471,878 - Psyr_0432 0.80 -0.1 471,923 - Psyr_0432 0.85 -1.3 471,923 - Psyr_0432 0.85 -0.4 471,923 - Psyr_0432 0.85 -0.8 471,937 + Psyr_0432 0.86 -1.8 472,192 - Psyr_0433 0.18 -0.0 472,399 - Psyr_0433 0.46 -1.8 472,407 + Psyr_0433 0.47 +0.6 472,408 - Psyr_0433 0.47 +0.6 472,629 + Psyr_0433 0.77 -0.3 472,629 + Psyr_0433 0.77 -2.4 472,630 - Psyr_0433 0.77 +0.3 472,630 - Psyr_0433 0.77 +0.4 472,630 - Psyr_0433 0.77 -0.3 472,630 - Psyr_0433 0.77 +0.8 472,630 - Psyr_0433 0.77 -1.3 472,634 - Psyr_0433 0.78 +0.6 472,658 + Psyr_0433 0.81 +0.2 472,789 + +0.3 472,789 + +0.9 472,789 + -0.5 472,789 + -0.4 472,789 + -0.2 472,789 + -0.6 472,789 + +0.2 472,790 - -1.2 472,790 - +0.3 472,790 - +0.2 472,790 - +1.0
Or see this region's nucleotide sequence