Experiment: KB with Erythromycin 25 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0322 and Psyr_0323 are separated by 51 nucleotides Psyr_0323 and Psyr_0324 are separated by 788 nucleotides
Psyr_0322: Psyr_0322 - 2-octaprenyl-6-methoxyphenol hydroxylase / 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase, at 338,837 to 340,024
_0322
Psyr_0323: Psyr_0323 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase / 2-octaprenyl-6-methoxyphenol hydroxylase, at 340,076 to 341,305
_0323
Psyr_0324: Psyr_0324 - transcriptional regulator, AraC family, at 342,094 to 343,086
_0324
Position (kb) 340
341
342 Strain fitness (log2 ratio) -2
-1
0
1
2 at 341.304 kb on - strand at 341.304 kb on - strand at 341.304 kb on - strand at 341.317 kb on + strand at 341.317 kb on + strand at 341.317 kb on + strand at 341.317 kb on + strand at 341.317 kb on + strand at 341.317 kb on + strand at 341.318 kb on - strand at 341.318 kb on - strand at 341.318 kb on - strand at 341.318 kb on - strand at 341.318 kb on - strand at 341.318 kb on - strand at 341.318 kb on - strand at 341.321 kb on + strand at 341.322 kb on - strand at 341.359 kb on + strand at 341.395 kb on - strand at 341.395 kb on - strand at 341.398 kb on + strand at 341.398 kb on + strand at 341.398 kb on + strand at 341.398 kb on + strand at 341.398 kb on + strand at 341.398 kb on + strand at 341.399 kb on - strand at 341.399 kb on - strand at 341.399 kb on - strand at 341.404 kb on - strand at 341.404 kb on - strand at 341.404 kb on - strand at 341.404 kb on - strand at 341.404 kb on - strand at 341.404 kb on - strand at 341.411 kb on - strand at 341.439 kb on - strand at 341.640 kb on - strand at 341.664 kb on - strand at 341.664 kb on - strand at 341.664 kb on - strand at 341.664 kb on - strand at 341.717 kb on + strand at 341.717 kb on + strand at 341.717 kb on + strand at 341.717 kb on + strand at 341.744 kb on - strand at 342.191 kb on + strand at 342.191 kb on + strand at 342.275 kb on + strand, within Psyr_0324 at 342.275 kb on + strand, within Psyr_0324 at 342.276 kb on - strand, within Psyr_0324
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Erythromycin 25 ug/ml remove 341,304 - -0.1 341,304 - +0.8 341,304 - -0.5 341,317 + +1.2 341,317 + -0.0 341,317 + -0.5 341,317 + +1.5 341,317 + -0.6 341,317 + -0.4 341,318 - +0.9 341,318 - -0.3 341,318 - -0.9 341,318 - -0.5 341,318 - -0.4 341,318 - +2.2 341,318 - +0.5 341,321 + +1.2 341,322 - +0.0 341,359 + +0.8 341,395 - -0.2 341,395 - +0.6 341,398 + -0.1 341,398 + -1.1 341,398 + -0.3 341,398 + +0.4 341,398 + +0.3 341,398 + +1.3 341,399 - -0.3 341,399 - -0.1 341,399 - -0.1 341,404 - +1.2 341,404 - -0.5 341,404 - -2.1 341,404 - +0.2 341,404 - -0.4 341,404 - -0.7 341,411 - +0.8 341,439 - -0.4 341,640 - +1.2 341,664 - +0.9 341,664 - +1.3 341,664 - +0.7 341,664 - +0.8 341,717 + +0.9 341,717 + +0.4 341,717 + +0.9 341,717 + +0.5 341,744 - -0.7 342,191 + -0.2 342,191 + +1.1 342,275 + Psyr_0324 0.18 -0.4 342,275 + Psyr_0324 0.18 -0.1 342,276 - Psyr_0324 0.18 +0.3
Or see this region's nucleotide sequence