Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_327 and Pf1N1B4_328 are separated by 905 nucleotides Pf1N1B4_328 and Pf1N1B4_329 are separated by 531 nucleotides
Pf1N1B4_327 - hypothetical protein, at 385,506 to 386,450
_327
Pf1N1B4_328 - Glucosyltransferase (side chain biosynthesis) (EC 2.4.1.-), at 387,356 to 388,624
_328
Pf1N1B4_329 - Acyltransferase, at 389,156 to 390,208
_329
Position (kb) 387
388
389 Strain fitness (log2 ratio) -1
0
1
2 at 386.938 kb on + strand at 386.939 kb on - strand at 386.940 kb on + strand at 387.303 kb on + strand at 387.304 kb on - strand at 387.305 kb on + strand at 387.453 kb on + strand at 387.722 kb on - strand, within Pf1N1B4_328 at 387.755 kb on + strand, within Pf1N1B4_328 at 387.770 kb on + strand, within Pf1N1B4_328 at 387.967 kb on + strand, within Pf1N1B4_328 at 387.967 kb on + strand, within Pf1N1B4_328 at 387.979 kb on - strand, within Pf1N1B4_328 at 388.032 kb on - strand, within Pf1N1B4_328 at 388.036 kb on - strand, within Pf1N1B4_328 at 388.174 kb on - strand, within Pf1N1B4_328 at 388.268 kb on + strand, within Pf1N1B4_328 at 388.273 kb on - strand, within Pf1N1B4_328 at 388.385 kb on + strand, within Pf1N1B4_328 at 388.461 kb on + strand, within Pf1N1B4_328 at 388.461 kb on + strand, within Pf1N1B4_328 at 388.540 kb on + strand at 388.541 kb on - strand at 388.541 kb on - strand at 388.541 kb on - strand at 388.606 kb on + strand at 388.607 kb on - strand at 388.628 kb on + strand at 388.789 kb on - strand at 388.941 kb on - strand at 388.991 kb on + strand at 389.131 kb on - strand at 389.132 kb on + strand at 389.133 kb on - strand at 389.251 kb on - strand at 389.304 kb on - strand, within Pf1N1B4_329 at 389.617 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 386,938 + +0.3 386,939 - +0.5 386,940 + -0.2 387,303 + -0.9 387,304 - +2.7 387,305 + +0.2 387,453 + -1.2 387,722 - Pf1N1B4_328 0.29 +0.4 387,755 + Pf1N1B4_328 0.31 -0.6 387,770 + Pf1N1B4_328 0.33 +0.1 387,967 + Pf1N1B4_328 0.48 -0.9 387,967 + Pf1N1B4_328 0.48 -1.2 387,979 - Pf1N1B4_328 0.49 +1.1 388,032 - Pf1N1B4_328 0.53 -0.7 388,036 - Pf1N1B4_328 0.54 -0.5 388,174 - Pf1N1B4_328 0.64 -1.2 388,268 + Pf1N1B4_328 0.72 -1.5 388,273 - Pf1N1B4_328 0.72 -0.7 388,385 + Pf1N1B4_328 0.81 -0.9 388,461 + Pf1N1B4_328 0.87 +0.8 388,461 + Pf1N1B4_328 0.87 -1.0 388,540 + +0.3 388,541 - -0.2 388,541 - +0.2 388,541 - -0.6 388,606 + -1.6 388,607 - -0.5 388,628 + -0.3 388,789 - -0.6 388,941 - +1.1 388,991 + -0.3 389,131 - -0.0 389,132 + -0.1 389,133 - +0.1 389,251 - -0.5 389,304 - Pf1N1B4_329 0.14 +0.8 389,617 - +1.1
Or see this region's nucleotide sequence