Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03137

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
3,283,588	+		CCNA_03135	0.58	+0.7
3,283,598	+		CCNA_03135	0.59	+1.8
3,283,640	+		CCNA_03135	0.62	-1.8
3,283,643	+		CCNA_03135	0.62	+0.2
3,283,648	-		CCNA_03135	0.63	-0.6
3,283,670	+		CCNA_03135	0.64	-1.0
3,283,682	+		CCNA_03135	0.65	+1.1
3,283,685	-		CCNA_03135	0.66	-1.0
3,283,740	+		CCNA_03135	0.70	+1.0
3,283,740	+		CCNA_03135	0.70	+2.6
3,283,747	+		CCNA_03135	0.70	-0.1
3,283,750	-		CCNA_03135	0.70	+0.2
3,283,752	+		CCNA_03135	0.71	+0.2
3,283,806	+		CCNA_03135	0.75	+0.4
3,283,814	-		CCNA_03135	0.75	-1.8
3,283,835	+		CCNA_03135	0.77	+0.0
3,283,843	-		CCNA_03135	0.77	-0.5
3,283,843	-		CCNA_03135	0.77	-0.7
3,283,977	+		CCNA_03135	0.87	+2.3
3,284,032	+				-0.8
3,284,056	+				-1.2
3,284,072	+				-0.9
3,284,072	+				+0.2
3,284,072	+				+1.2
3,284,080	-				-0.5
3,284,127	+				+1.0
3,284,160	-				-0.5
3,284,199	-		CCNA_03136	0.12	-1.2
3,284,233	+		CCNA_03136	0.20	+1.0
3,284,295	-		CCNA_03136	0.35	-0.6
3,284,308	+		CCNA_03136	0.38	+1.8
3,284,419	+		CCNA_03136	0.65	+1.0
3,284,425	+		CCNA_03136	0.66	+1.8
3,284,473	+		CCNA_03136	0.78	+1.2
3,284,473	+		CCNA_03136	0.78	+1.5
3,284,473	+		CCNA_03136	0.78	+1.2
3,284,479	+		CCNA_03136	0.79	+1.0
3,284,605	+				+1.5
3,284,605	-				-0.3
3,284,634	+				+0.1
3,284,634	+				+1.2
3,284,634	+				+1.7
3,284,634	+				+1.2
3,284,634	-				-0.7
3,284,661	+				+0.9
3,284,685	-		CCNA_03137	0.11	+0.8
3,284,757	+		CCNA_03137	0.18	+0.9
3,284,762	+		CCNA_03137	0.18	+1.3
3,284,789	+				+0.8
3,284,798	-		CCNA_03137	0.22	-1.3
3,284,807	-		CCNA_03137	0.23	-0.4
3,284,807	-		CCNA_03137	0.23	-0.3
3,284,831	+		CCNA_03137	0.25	-0.1
3,284,866	+		CCNA_03137	0.28	+2.2
3,284,874	-		CCNA_03137	0.29	+2.4
3,284,881	+		CCNA_03137	0.30	+0.0
3,284,881	+		CCNA_03137	0.30	+0.2
3,284,881	+		CCNA_03137	0.30	+0.1
3,284,886	+		CCNA_03137	0.30	+1.2
3,284,889	-		CCNA_03137	0.30	+0.0
3,284,900	-		CCNA_03137	0.31	+0.1
3,284,900	-		CCNA_03137	0.31	+0.5
3,284,901	+		CCNA_03137	0.31	+1.2
3,284,902	+		CCNA_03137	0.32	+0.7
3,284,910	-		CCNA_03137	0.32	-0.7
3,284,939	+		CCNA_03137	0.35	+1.1
3,285,021	-		CCNA_03137	0.43	-0.2
3,285,049	+		CCNA_03137	0.45	+0.0
3,285,057	-		CCNA_03137	0.46	-0.8
3,285,106	-		CCNA_03137	0.51	+0.9
3,285,147	+		CCNA_03137	0.55	+1.6
3,285,147	+		CCNA_03137	0.55	+1.2
3,285,155	-		CCNA_03137	0.55	+0.7
3,285,220	-		CCNA_03137	0.62	+0.0
3,285,225	+		CCNA_03137	0.62	+1.4
3,285,268	+		CCNA_03137	0.66	+1.1
3,285,273	+		CCNA_03137	0.67	+0.4
3,285,274	+		CCNA_03137	0.67	+1.0
3,285,295	+		CCNA_03137	0.69	+1.0
3,285,328	+		CCNA_03137	0.72	+1.0
3,285,328	+		CCNA_03137	0.72	+0.3
3,285,328	+		CCNA_03137	0.72	+0.3
3,285,328	+		CCNA_03137	0.72	+0.2
3,285,328	+		CCNA_03137	0.72	+1.2
3,285,328	+		CCNA_03137	0.72	+0.6
3,285,336	-		CCNA_03137	0.73	-1.0
3,285,336	-		CCNA_03137	0.73	+0.2
3,285,336	-		CCNA_03137	0.73	-1.0
3,285,336	-		CCNA_03137	0.73	-0.6
3,285,357	-		CCNA_03137	0.75	+1.0
3,285,446	+		CCNA_03137	0.83	+0.6
3,285,446	+		CCNA_03137	0.83	+1.8
3,285,446	+		CCNA_03137	0.83	-0.5
3,285,446	+		CCNA_03137	0.83	+0.4
3,285,449	-				+0.4
3,285,449	-				-0.1
3,285,449	-				+2.2
3,285,451	+				+0.0
3,285,451	+				+1.2
3,285,454	-				+1.3
3,285,454	-				-1.6
3,285,459	-				-1.5
3,285,459	-				+0.1
3,285,459	-				+0.0
3,285,464	-				-0.2
3,285,475	+				+0.1
3,285,481	-				+1.7
3,285,490	+				+1.0
3,285,496	-				-0.6
3,285,511	+				-1.1
3,285,511	+				-1.8
3,285,544	+				+2.0
3,285,554	+				+1.2
3,285,557	-				-0.2
3,285,581	+				+0.1
3,285,581	+				-1.1
3,285,589	-				+0.3
3,285,593	+				-0.8
3,285,621	+				-0.4
3,285,640	+		CCNA_03986	0.49	+1.0
3,285,647	-		CCNA_03986	0.51	+0.7
3,285,648	-		CCNA_03986	0.51	-0.6
3,285,658	-		CCNA_03986	0.54	+0.7
3,285,658	-		CCNA_03986	0.54	+0.0
3,285,691	+		CCNA_03986	0.63	+0.3
3,285,697	+		CCNA_03986	0.64	+0.6
3,285,697	+		CCNA_03986	0.64	-0.0
3,285,705	-		CCNA_03986	0.66	-1.2
3,285,722	+		CCNA_03986	0.71	+1.1
3,285,725	-		CCNA_03986	0.71	-1.4
3,285,725	-		CCNA_03986	0.71	-2.4
3,285,759	+		CCNA_03986	0.80	+0.5
3,285,773	+		CCNA_03986	0.84	+0.0
3,285,781	-		CCNA_03986	0.86	+0.0
3,285,786	+		CCNA_03986	0.87	+0.3
3,285,845	+				-1.3
3,285,845	+				+0.2
3,285,853	-				+1.4
3,285,857	+				-1.3
3,285,865	-				+0.1
3,285,871	-				-2.7
3,285,878	+				-0.9
3,285,878	+				-0.8
3,285,886	-				-1.3
3,285,901	-				-0.8
3,285,942	-				-1.8
3,286,024	-				+0.0
3,286,037	-				-1.7
3,286,038	+				-0.6
3,286,087	-				-0.5
3,286,137	+				+0.3
3,286,137	-				+0.8
3,286,204	-				+0.3
3,286,224	-		CCNA_03138	0.10	-0.9
3,286,241	+		CCNA_03138	0.11	+0.6
3,286,278	+		CCNA_03138	0.12	-0.0
3,286,286	-		CCNA_03138	0.13	+0.1
3,286,300	+		CCNA_03138	0.13	+2.1
3,286,313	+		CCNA_03138	0.14	+1.8
3,286,325	+		CCNA_03138	0.15	+0.2
3,286,343	+		CCNA_03138	0.15	+1.5
3,286,373	+		CCNA_03138	0.17	+0.6
3,286,388	+		CCNA_03138	0.17	+0.7
3,286,399	-		CCNA_03138	0.18	-1.5
3,286,449	-		CCNA_03138	0.20	-0.7
3,286,474	+		CCNA_03138	0.21	+0.4
3,286,474	+		CCNA_03138	0.21	+0.3
3,286,474	+		CCNA_03138	0.21	+0.7
3,286,477	-		CCNA_03138	0.21	+0.0
3,286,479	+		CCNA_03138	0.22	-1.9
3,286,482	-		CCNA_03138	0.22	-1.3
3,286,488	+		CCNA_03138	0.22	+1.1
3,286,494	-		CCNA_03138	0.22	-0.4
3,286,496	-		CCNA_03138	0.22	-2.4
3,286,512	+		CCNA_03138	0.23	+0.1
3,286,519	+		CCNA_03138	0.23	+0.2
3,286,526	+		CCNA_03138	0.24	+0.7
3,286,528	+		CCNA_03138	0.24	+0.3
3,286,541	+		CCNA_03138	0.24	+0.4
3,286,572	+		CCNA_03138	0.26	+1.2
3,286,585	+		CCNA_03138	0.26	-0.5
3,286,593	-		CCNA_03138	0.27	+0.2
3,286,593	-		CCNA_03138	0.27	-0.6
3,286,621	+		CCNA_03138	0.28	+1.3