Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02669

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
2,820,336	+		CCNA_02667	0.27	+1.3
2,820,343	+		CCNA_02667	0.29	+1.0
2,820,345	+		CCNA_02667	0.29	+1.7
2,820,363	-		CCNA_02667	0.33	-2.3
2,820,385	+		CCNA_02667	0.38	+1.2
2,820,406	+		CCNA_02667	0.43	+1.0
2,820,414	-		CCNA_02667	0.45	-1.7
2,820,416	+		CCNA_02667	0.45	+1.1
2,820,424	-		CCNA_02667	0.47	-1.6
2,820,430	+		CCNA_02667	0.48	+0.7
2,820,431	+		CCNA_02667	0.48	+2.0
2,820,437	-		CCNA_02667	0.50	-1.5
2,820,447	+		CCNA_02667	0.52	+1.2
2,820,447	+		CCNA_02667	0.52	+1.2
2,820,447	+		CCNA_02667	0.52	+1.3
2,820,447	+		CCNA_02667	0.52	+1.3
2,820,455	-		CCNA_02667	0.54	-0.3
2,820,455	-		CCNA_02667	0.54	-1.2
2,820,480	+		CCNA_02667	0.59	+1.0
2,820,539	-		CCNA_02667	0.72	-1.2
2,820,584	-		CCNA_02667	0.82	-1.2
2,820,609	+		CCNA_02667	0.88	+2.3
2,820,609	+		CCNA_02667	0.88	+1.6
2,820,617	-		CCNA_02667	0.90	-1.8
2,820,642	+				+1.6
2,820,642	+				+2.0
2,820,657	+				+0.8
2,820,657	+				-0.6
2,820,657	+				+0.4
2,820,657	+				-0.6
2,820,657	+				+0.2
2,820,657	+				+1.0
2,820,663	+				-0.4
2,820,663	+				-0.2
2,820,663	+				-0.2
2,820,663	+				+0.7
2,820,663	+				-0.6
2,820,665	-				+0.3
2,820,665	-				+0.5
2,820,665	-				-1.0
2,820,671	-				-0.3
2,820,671	-				-1.2
2,820,671	-				-0.7
2,820,702	+				+0.7
2,820,709	-				-0.3
2,820,831	+		CCNA_02668	0.26	-0.4
2,820,858	+		CCNA_02668	0.31	-2.3
2,820,858	-		CCNA_02668	0.31	-0.2
2,820,866	-		CCNA_02668	0.32	-0.2
2,820,888	-		CCNA_02668	0.35	+0.6
2,820,888	-		CCNA_02668	0.35	-0.1
2,820,888	-		CCNA_02668	0.35	-0.3
2,820,888	-		CCNA_02668	0.35	+0.1
2,820,891	+		CCNA_02668	0.36	-0.8
2,820,901	+		CCNA_02668	0.37	-1.7
2,820,915	+		CCNA_02668	0.40	-1.1
2,820,926	+		CCNA_02668	0.41	+0.8
2,820,929	-		CCNA_02668	0.42	-0.4
2,820,945	-		CCNA_02668	0.44	+0.6
2,820,965	-		CCNA_02668	0.48	+0.5
2,820,973	+		CCNA_02668	0.49	-0.8
2,821,010	-		CCNA_02668	0.55	-0.0
2,821,030	-		CCNA_02668	0.58	-0.5
2,821,048	+		CCNA_02668	0.61	+0.2
2,821,048	+		CCNA_02668	0.61	-1.1
2,821,055	-		CCNA_02668	0.62	+0.0
2,821,056	-		CCNA_02668	0.62	-0.2
2,821,066	+		CCNA_02668	0.64	-1.0
2,821,075	-		CCNA_02668	0.65	+0.5
2,821,077	+		CCNA_02668	0.65	-1.3
2,821,103	+		CCNA_02668	0.70	-1.1
2,821,103	+		CCNA_02668	0.70	-2.2
2,821,103	+		CCNA_02668	0.70	-0.5
2,821,113	+		CCNA_02668	0.71	-1.5
2,821,124	+		CCNA_02668	0.73	-1.4
2,821,137	+		CCNA_02668	0.75	+1.3
2,821,137	-		CCNA_02668	0.75	+0.4
2,821,160	-		CCNA_02668	0.79	+1.0
2,821,179	+		CCNA_02668	0.82	-1.6
2,821,189	+		CCNA_02668	0.83	-1.4
2,821,197	-		CCNA_02668	0.84	+0.5
2,821,200	+		CCNA_02668	0.85	-1.1
2,821,203	-		CCNA_02668	0.85	-0.3
2,821,218	-		CCNA_02668	0.88	+0.0
2,821,218	-		CCNA_02668	0.88	+0.3
2,821,288	+				-1.6
2,821,288	+				-2.2
2,821,295	+				-0.4
2,821,296	-				-0.5
2,821,297	-				-0.4
2,821,297	-				+0.6
2,821,308	-				-2.1
2,821,309	+				-0.2
2,821,309	+				+0.7
2,821,313	+				+0.3
2,821,317	-				-1.2
2,821,369	+				+0.8
2,821,369	+				-0.7
2,821,369	+				-0.8
2,821,376	-				-0.4
2,821,412	+				+1.8
2,821,443	-		CCNA_02669	0.10	-2.1
2,821,455	-		CCNA_02669	0.11	-1.0
2,821,485	+		CCNA_02669	0.14	-3.3
2,821,495	+		CCNA_02669	0.14	-1.0
2,821,503	-		CCNA_02669	0.15	-0.2
2,821,503	-		CCNA_02669	0.15	-1.1
2,821,503	-		CCNA_02669	0.15	+0.5
2,821,503	-		CCNA_02669	0.15	-1.8
2,821,521	+				+0.2
2,821,583	+		CCNA_02669	0.21	-0.7
2,821,591	-		CCNA_02669	0.22	-2.2
2,821,712	-		CCNA_02669	0.31	-1.0
2,821,744	+		CCNA_02669	0.34	-0.4
2,821,745	+		CCNA_02669	0.34	-2.4
2,821,760	+		CCNA_02669	0.35	-1.3
2,821,771	+		CCNA_02669	0.36	+0.5
2,821,779	-		CCNA_02669	0.37	+1.8
2,821,789	-		CCNA_02669	0.37	-0.5
2,821,802	+		CCNA_02669	0.38	-1.2
2,821,913	+		CCNA_02669	0.47	-0.5
2,821,913	+				+1.8
2,821,959	-		CCNA_02669	0.51	-1.9
2,821,967	+		CCNA_02669	0.51	-0.2
2,821,967	+		CCNA_02669	0.51	-0.5
2,821,973	+		CCNA_02669	0.52	-0.8
2,822,001	+		CCNA_02669	0.54	+0.3
2,822,001	+		CCNA_02669	0.54	-0.7
2,822,002	+		CCNA_02669	0.54	-0.8
2,822,009	-		CCNA_02669	0.54	-2.8
2,822,009	-		CCNA_02669	0.54	-2.1
2,822,009	-		CCNA_02669	0.54	-1.1
2,822,009	-		CCNA_02669	0.54	-2.1
2,822,063	-		CCNA_02669	0.59	+0.5
2,822,092	+		CCNA_02669	0.61	+0.8
2,822,092	+		CCNA_02669	0.61	-2.0
2,822,092	+				+0.2
2,822,100	-		CCNA_02669	0.62	-2.5
2,822,100	-		CCNA_02669	0.62	-3.2
2,822,100	-		CCNA_02669	0.62	-2.0
2,822,100	-		CCNA_02669	0.62	-1.9
2,822,120	-		CCNA_02669	0.63	-1.7
2,822,134	+		CCNA_02669	0.64	+0.8
2,822,152	-		CCNA_02669	0.66	-2.5
2,822,152	-		CCNA_02669	0.66	-0.8
2,822,157	+		CCNA_02669	0.66	-2.2
2,822,165	-		CCNA_02669	0.67	-1.9
2,822,213	-		CCNA_02669	0.70	-1.8
2,822,215	-		CCNA_02669	0.71	-1.5
2,822,247	-		CCNA_02669	0.73	-1.8
2,822,256	+		CCNA_02669	0.74	-2.2
2,822,258	-		CCNA_02669	0.74	-2.2
2,822,288	-		CCNA_02669	0.76	-1.1
2,822,300	+		CCNA_02669	0.77	-2.4
2,822,308	-		CCNA_02669	0.78	-1.4
2,822,308	-		CCNA_02669	0.78	-2.2
2,822,316	+		CCNA_02669	0.78	+2.8
2,822,316	+		CCNA_02669	0.78	-0.5
2,822,316	+		CCNA_02669	0.78	-2.8
2,822,374	+		CCNA_02669	0.83	+0.1
2,822,374	+		CCNA_02669	0.83	-1.7
2,822,383	-		CCNA_02669	0.84	+2.3
2,822,478	-				-1.2
2,822,491	+				-2.8
2,822,517	-				-0.7
2,822,517	-				-2.1
2,822,517	-				-0.8
2,822,517	-				+0.1
2,822,561	-				-1.0
2,822,575	+				-1.8
2,822,575	+				-0.9
2,822,689	+				+0.6
2,822,711	-				-0.4
2,822,737	+				-0.7
2,822,764	-				-0.9
2,822,764	-				-1.7
2,822,782	+				-1.4
2,822,843	+		CCNA_02670	0.13	-0.5
2,822,848	+		CCNA_02670	0.13	+1.0
2,822,848	+		CCNA_02670	0.13	-1.5
2,822,848	+		CCNA_02670	0.13	-0.5
2,822,848	+		CCNA_02670	0.13	-0.6
2,822,848	+		CCNA_02670	0.13	+1.5
2,822,848	+		CCNA_02670	0.13	-0.5
2,822,848	+		CCNA_02670	0.13	-0.9
2,822,848	+		CCNA_02670	0.13	-0.7
2,822,848	+		CCNA_02670	0.13	+0.5
2,822,856	-		CCNA_02670	0.14	+0.3
2,822,856	-		CCNA_02670	0.14	-0.4
2,822,856	-		CCNA_02670	0.14	-2.0
2,822,856	-		CCNA_02670	0.14	-0.9
2,822,856	-		CCNA_02670	0.14	-1.5
2,822,986	+		CCNA_02670	0.22	-0.5
2,823,005	+		CCNA_02670	0.23	-1.2
2,823,005	+		CCNA_02670	0.23	+0.2
2,823,005	+		CCNA_02670	0.23	-1.6
2,823,013	-		CCNA_02670	0.24	-1.6
2,823,013	-		CCNA_02670	0.24	+0.2
2,823,013	-		CCNA_02670	0.24	-0.4
2,823,013	-		CCNA_02670	0.24	+1.0
2,823,015	-		CCNA_02670	0.24	-0.1
2,823,023	-		CCNA_02670	0.24	-2.7
2,823,025	-		CCNA_02670	0.24	+1.3
2,823,025	-		CCNA_02670	0.24	+0.3
2,823,027	+		CCNA_02670	0.25	-2.5
2,823,027	+		CCNA_02670	0.25	-1.6
2,823,035	-		CCNA_02670	0.25	+0.8
2,823,036	-		CCNA_02670	0.25	-1.0
2,823,055	-		CCNA_02670	0.26	-0.1
2,823,065	+		CCNA_02670	0.27	-1.3
2,823,083	-		CCNA_02670	0.28	+0.4
2,823,086	+		CCNA_02670	0.28	-0.6
2,823,122	+		CCNA_02670	0.30	+1.2
2,823,123	+		CCNA_02670	0.31	-1.6
2,823,131	-		CCNA_02670	0.31	+0.1
2,823,138	+		CCNA_02670	0.31	-0.9
2,823,141	-		CCNA_02670	0.32	-0.5
2,823,146	-		CCNA_02670	0.32	+0.2
2,823,163	-		CCNA_02670	0.33	+1.4
2,823,163	-		CCNA_02670	0.33	+1.2
2,823,226	+		CCNA_02670	0.37	-0.2
2,823,234	-		CCNA_02670	0.37	-0.2
2,823,275	-		CCNA_02670	0.40	+0.7
2,823,276	-		CCNA_02670	0.40	-1.2
2,823,282	-		CCNA_02670	0.40	-0.1
2,823,313	+		CCNA_02670	0.42	+1.0
2,823,328	+		CCNA_02670	0.43	-0.1
2,823,343	-		CCNA_02670	0.44	+0.2
2,823,361	-		CCNA_02670	0.45	-0.6
2,823,379	-		CCNA_02670	0.46	-1.7
2,823,403	+		CCNA_02670	0.48	-0.5
2,823,467	+		CCNA_02670	0.52	-0.1
2,823,475	-		CCNA_02670	0.52	-0.2
2,823,490	-		CCNA_02670	0.53	-0.2
2,823,525	+		CCNA_02670	0.56	-1.6
2,823,525	+		CCNA_02670	0.56	-0.0
2,823,526	+		CCNA_02670	0.56	+0.2
2,823,530	+		CCNA_02670	0.56	-1.1
2,823,553	-		CCNA_02670	0.57	-0.6
2,823,560	+		CCNA_02670	0.58	+2.2
2,823,568	-		CCNA_02670	0.58	+1.3
2,823,568	-		CCNA_02670	0.58	+0.8
2,823,568	-		CCNA_02670	0.58	-0.1