Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02398

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
2,539,203	-		CCNA_02396	0.74	-1.7
2,539,216	+		CCNA_02396	0.76	+1.4
2,539,226	-		CCNA_02396	0.78	-2.1
2,539,235	+		CCNA_02396	0.79	-2.3
2,539,243	-		CCNA_02396	0.80	+0.7
2,539,243	-		CCNA_02396	0.80	+0.1
2,539,243	-		CCNA_02396	0.80	-0.1
2,539,262	+		CCNA_02396	0.82	-0.9
2,539,262	+		CCNA_02396	0.82	-1.0
2,539,324	-				-1.2
2,539,324	-				+0.7
2,539,353	+				-1.5
2,539,361	-				+1.3
2,539,373	-				+0.7
2,539,464	+				-0.5
2,539,464	+				-1.0
2,539,472	-				+1.2
2,539,472	-				+1.6
2,539,479	+				-0.9
2,539,479	+				-1.8
2,539,487	-				+0.9
2,539,512	+				-0.8
2,539,521	-				-1.6
2,539,531	+				-0.8
2,539,539	-				-1.3
2,539,576	+		CCNA_02397	0.13	-0.4
2,539,576	+		CCNA_02397	0.13	-0.6
2,539,576	+		CCNA_02397	0.13	+0.6
2,539,584	-		CCNA_02397	0.14	-0.4
2,539,625	-		CCNA_02397	0.20	-1.8
2,539,744	-		CCNA_02397	0.36	+0.1
2,539,756	+		CCNA_02397	0.38	-0.3
2,539,761	+		CCNA_02397	0.39	-1.0
2,539,766	+		CCNA_02397	0.39	-1.6
2,539,766	+		CCNA_02397	0.39	-0.2
2,539,766	+		CCNA_02397	0.39	-0.7
2,539,769	-		CCNA_02397	0.40	-0.6
2,539,774	-		CCNA_02397	0.41	-2.0
2,539,774	-		CCNA_02397	0.41	+0.3
2,539,774	-				+1.3
2,539,774	-		CCNA_02397	0.41	-0.9
2,539,782	+		CCNA_02397	0.42	-1.9
2,539,831	-		CCNA_02397	0.48	-0.8
2,539,878	-		CCNA_02397	0.55	+0.3
2,539,901	+		CCNA_02397	0.58	-0.5
2,539,902	-		CCNA_02397	0.58	-0.6
2,539,902	-		CCNA_02397	0.58	-0.9
2,539,908	+		CCNA_02397	0.59	-0.5
2,539,979	+		CCNA_02397	0.69	-0.4
2,539,984	+		CCNA_02397	0.70	-0.6
2,539,984	+		CCNA_02397	0.70	+0.4
2,539,987	-		CCNA_02397	0.70	+1.3
2,539,987	-		CCNA_02397	0.70	-1.2
2,540,002	+		CCNA_02397	0.72	-0.1
2,540,030	-		CCNA_02397	0.76	-2.1
2,540,051	+		CCNA_02397	0.79	-0.9
2,540,052	+		CCNA_02397	0.79	+1.4
2,540,090	+		CCNA_02397	0.84	-1.3
2,540,090	+		CCNA_02397	0.84	-0.0
2,540,140	-				-1.6
2,540,178	-				+0.6
2,540,195	+				+1.1
2,540,205	+				+2.9
2,540,223	+				+0.1
2,540,228	+				-1.3
2,540,231	-				+0.1
2,540,231	-				+1.9
2,540,231	-				+1.2
2,540,231	-				+1.1
2,540,241	-				-0.1
2,540,275	+				+1.9
2,540,275	+				+0.6
2,540,283	-				-1.4
2,540,283	-				-0.8
2,540,319	+		CCNA_02398	0.12	+1.1
2,540,325	+		CCNA_02398	0.13	+0.2
2,540,325	+		CCNA_02398	0.13	-0.7
2,540,325	+		CCNA_02398	0.13	-0.1
2,540,325	+		CCNA_02398	0.13	+0.3
2,540,325	+		CCNA_02398	0.13	-0.1
2,540,333	-		CCNA_02398	0.14	-0.9
2,540,333	-		CCNA_02398	0.14	-0.7
2,540,333	-		CCNA_02398	0.14	-0.6
2,540,356	-		CCNA_02398	0.16	-0.6
2,540,376	+		CCNA_02398	0.18	-1.0
2,540,376	+		CCNA_02398	0.18	+1.2
2,540,376	+		CCNA_02398	0.18	+1.6
2,540,379	-		CCNA_02398	0.18	+1.7
2,540,384	-		CCNA_02398	0.19	+0.1
2,540,384	-		CCNA_02398	0.19	-1.7
2,540,384	-		CCNA_02398	0.19	-1.0
2,540,384	-		CCNA_02398	0.19	-0.3
2,540,384	-		CCNA_02398	0.19	-0.4
2,540,384	-		CCNA_02398	0.19	+0.5
2,540,384	-		CCNA_02398	0.19	-0.9
2,540,384	-		CCNA_02398	0.19	-1.0
2,540,384	-		CCNA_02398	0.19	+1.6
2,540,384	-		CCNA_02398	0.19	-0.2
2,540,411	+		CCNA_02398	0.21	-0.3
2,540,535	+		CCNA_02398	0.34	+0.3
2,540,535	+		CCNA_02398	0.34	-0.1
2,540,535	+		CCNA_02398	0.34	+0.6
2,540,543	-		CCNA_02398	0.35	-1.6
2,540,543	-		CCNA_02398	0.35	+0.7
2,540,554	+		CCNA_02398	0.36	-0.3
2,540,561	-		CCNA_02398	0.36	-0.8
2,540,716	+		CCNA_02398	0.52	+1.9
2,540,746	+		CCNA_02398	0.55	-0.8
2,540,754	-		CCNA_02398	0.56	-0.2
2,540,771	-		CCNA_02398	0.58	-1.8
2,540,784	+		CCNA_02398	0.59	-2.4
2,540,804	+		CCNA_02398	0.61	+1.3
2,540,845	-		CCNA_02398	0.65	-0.2
2,540,852	+		CCNA_02398	0.66	-0.8
2,540,852	+		CCNA_02398	0.66	+0.2
2,540,852	+		CCNA_02398	0.66	-0.3
2,540,855	-		CCNA_02398	0.66	+1.5
2,540,860	-		CCNA_02398	0.66	+1.1
2,540,860	-		CCNA_02398	0.66	-0.7
2,540,904	-		CCNA_02398	0.71	+0.2
2,540,919	+		CCNA_02398	0.72	-0.7
2,540,927	-		CCNA_02398	0.73	+1.4
2,540,927	-		CCNA_02398	0.73	-0.2
2,540,927	-		CCNA_02398	0.73	+1.2
2,540,955	+		CCNA_02398	0.76	+1.9
2,540,956	-		CCNA_02398	0.76	-0.4
2,541,001	-		CCNA_02398	0.81	+1.1
2,541,002	+		CCNA_02398	0.81	-0.9
2,541,059	+		CCNA_02398	0.86	+0.2
2,541,083	+		CCNA_02398	0.89	+0.7
2,541,110	-				-0.5
2,541,141	-				+2.4
2,541,156	-				+0.2
2,541,158	+				-1.5
2,541,166	-				-0.7
2,541,206	+				-0.9
2,541,206	+				+1.3
2,541,206	+				-0.9
2,541,214	-				-0.0
2,541,218	+				-0.2
2,541,218	+				+0.5
2,541,224	+				-1.1
2,541,226	-				-1.1
2,541,226	-				+2.2
2,541,297	+				+0.1
2,541,297	+				-2.4
2,541,325	-				+1.1
2,541,325	-				-0.0
2,541,330	+				-0.2
2,541,394	+		CCNA_02399	0.17	-0.3
2,541,432	-		CCNA_02399	0.22	+1.3
2,541,432	-		CCNA_02399	0.22	+1.0
2,541,432	-		CCNA_02399	0.22	+0.6
2,541,467	-		CCNA_02399	0.26	+1.9
2,541,500	-		CCNA_02399	0.30	-0.1
2,541,540	+		CCNA_02399	0.35	-1.1
2,541,548	-		CCNA_02399	0.36	-0.4
2,541,548	-		CCNA_02399	0.36	+0.5
2,541,572	+		CCNA_02399	0.39	-0.7
2,541,580	-		CCNA_02399	0.40	-0.4
2,541,587	+		CCNA_02399	0.41	-2.5
2,541,595	-		CCNA_02399	0.42	+0.1
2,541,595	-		CCNA_02399	0.42	+0.6
2,541,695	-		CCNA_02399	0.55	+1.0
2,541,775	-		CCNA_02399	0.64	+0.6
2,541,775	-		CCNA_02399	0.64	-0.4
2,541,790	-		CCNA_02399	0.66	+0.9
2,541,841	-		CCNA_02399	0.73	+0.6
2,541,889	-		CCNA_02399	0.79	+0.2
2,541,889	-		CCNA_02399	0.79	+2.5
2,541,902	+		CCNA_02399	0.80	-2.1
2,541,907	+		CCNA_02399	0.81	-1.5
2,541,910	-		CCNA_02399	0.81	+2.2
2,541,917	-		CCNA_02399	0.82	-0.7
2,541,924	-		CCNA_02399	0.83	+0.1
2,541,936	+		CCNA_02399	0.84	+1.9
2,541,936	+		CCNA_02399	0.84	-1.2
2,541,946	+		CCNA_02399	0.86	-1.3
2,541,963	+		CCNA_02399	0.88	+0.4
2,541,966	-		CCNA_02399	0.88	+0.4
2,541,971	-		CCNA_02399	0.89	+1.7
2,542,003	+				+1.2
2,542,042	-				-1.2
2,542,068	+				-2.8
2,542,070	+				+0.5
2,542,070	-				-0.4
2,542,076	-				-0.3
2,542,076	-				-0.1
2,542,076	-				-1.3
2,542,089	-				-1.9
2,542,089	-				-1.5
2,542,096	+				+0.8
2,542,191	-				-0.4
2,542,191	-				-1.7