Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01567

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
1,682,645	+				-1.9
1,682,645	+				+0.2
1,682,672	+				+1.9
1,682,672	+				-2.5
1,682,672	+				-0.3
1,682,680	-				-0.1
1,682,707	+				-0.6
1,682,707	+				-1.9
1,682,707	+				-0.1
1,682,714	+				-0.8
1,682,715	-				-1.4
1,682,715	-				+0.6
1,682,715	-				+1.1
1,682,715	-				-2.4
1,682,715	-				-0.4
1,682,715	-				+1.4
1,682,715	-				+0.9
1,682,731	+				+0.5
1,682,734	-				-2.3
1,682,739	-				+0.2
1,682,739	-				-0.2
1,682,739	-				-0.9
1,682,843	+				-0.1
1,682,843	+				+3.2
1,682,843	+				-1.4
1,682,879	+				+0.6
1,682,879	+				+0.6
1,682,879	+				+0.9
1,682,882	-				+0.4
1,682,887	-				-0.4
1,682,887	-				+0.9
1,682,922	-				+0.3
1,683,016	+				-1.1
1,683,024	-				+1.4
1,683,058	+		CCNA_01566	0.20	-0.0
1,683,058	+		CCNA_01566	0.20	+1.2
1,683,069	-		CCNA_01566	0.23	-0.6
1,683,128	+		CCNA_01566	0.42	+0.5
1,683,183	-		CCNA_01566	0.60	+1.3
1,683,200	+		CCNA_01566	0.65	-0.2
1,683,221	+		CCNA_01566	0.72	-0.7
1,683,249	+		CCNA_01566	0.81	-0.1
1,683,271	-		CCNA_01566	0.88	+0.2
1,683,302	+				+1.0
1,683,327	+				-0.7
1,683,337	+				-0.6
1,683,443	-				+0.5
1,683,507	+				-2.4
1,683,515	-				+0.1
1,683,515	-				+0.5
1,683,515	-				+0.6
1,683,529	+				-1.4
1,683,539	+				+0.8
1,683,547	-				-1.6
1,683,604	+				+1.0
1,683,607	-				+0.1
1,683,609	+				-0.6
1,683,617	-				+2.7
1,683,646	-				-1.1
1,683,664	-				+1.1
1,683,664	-				-1.0
1,683,688	-		CCNA_01567	0.11	+1.1
1,683,693	+		CCNA_01567	0.12	-0.4
1,683,693	+		CCNA_01567	0.12	+0.9
1,683,693	+		CCNA_01567	0.12	+1.0
1,683,701	-		CCNA_01567	0.12	-0.9
1,683,701	-		CCNA_01567	0.12	+0.4
1,683,924	+		CCNA_01567	0.33	-0.1
1,683,924	+		CCNA_01567	0.33	-1.7
1,683,986	+		CCNA_01567	0.39	+0.5
1,683,989	-		CCNA_01567	0.39	-0.6
1,683,989	-		CCNA_01567	0.39	-1.6
1,684,074	+		CCNA_01567	0.47	-1.7
1,684,074	+		CCNA_01567	0.47	+1.2
1,684,100	+		CCNA_01567	0.49	+1.7
1,684,106	+		CCNA_01567	0.50	+0.2
1,684,106	+		CCNA_01567	0.50	+0.4
1,684,109	-		CCNA_01567	0.50	-1.3
1,684,114	-		CCNA_01567	0.50	-0.6
1,684,210	+		CCNA_01567	0.59	-0.9
1,684,218	-		CCNA_01567	0.60	-1.1
1,684,233	+		CCNA_01567	0.61	+0.8
1,684,241	-				+4.2
1,684,241	-		CCNA_01567	0.62	-0.7
1,684,241	-		CCNA_01567	0.62	+0.2
1,684,265	+		CCNA_01567	0.64	+0.4
1,684,265	+		CCNA_01567	0.64	+1.4
1,684,265	+		CCNA_01567	0.64	-0.2
1,684,265	+		CCNA_01567	0.64	+0.4
1,684,265	+		CCNA_01567	0.64	+0.7
1,684,273	-		CCNA_01567	0.65	-1.5
1,684,273	-		CCNA_01567	0.65	+0.0
1,684,273	-		CCNA_01567	0.65	-0.1
1,684,273	-		CCNA_01567	0.65	+2.0
1,684,275	+		CCNA_01567	0.65	-1.2
1,684,275	+		CCNA_01567	0.65	+0.7
1,684,275	+		CCNA_01567	0.65	+0.4
1,684,275	+		CCNA_01567	0.65	-0.3
1,684,275	+		CCNA_01567	0.65	+1.1
1,684,275	+		CCNA_01567	0.65	+0.0
1,684,275	+		CCNA_01567	0.65	-0.1
1,684,275	+		CCNA_01567	0.65	+1.2
1,684,275	+		CCNA_01567	0.65	-2.1
1,684,278	-		CCNA_01567	0.65	-1.4
1,684,280	+		CCNA_01567	0.66	+0.3
1,684,283	-		CCNA_01567	0.66	+0.3
1,684,283	-		CCNA_01567	0.66	-1.0
1,684,288	-		CCNA_01567	0.66	-2.4
1,684,288	-		CCNA_01567	0.66	-1.7
1,684,288	-		CCNA_01567	0.66	+0.0
1,684,288	-		CCNA_01567	0.66	-1.0
1,684,290	+		CCNA_01567	0.67	+0.6
1,684,324	-		CCNA_01567	0.70	+1.2
1,684,370	-		CCNA_01567	0.74	-0.4
1,684,386	+		CCNA_01567	0.75	+0.1
1,684,448	+		CCNA_01567	0.81	+0.3
1,684,448	+		CCNA_01567	0.81	+0.6
1,684,493	+		CCNA_01567	0.85	+1.4
1,684,501	-		CCNA_01567	0.86	-0.4
1,684,505	+		CCNA_01567	0.86	-0.3
1,684,505	+		CCNA_01567	0.86	+1.8
1,684,509	-		CCNA_01567	0.87	-1.2
1,684,529	+		CCNA_01567	0.89	+0.2
1,684,561	+				+1.6
1,684,588	+				-0.2
1,684,588	+				+0.2
1,684,598	+				-0.6
1,684,606	-				-0.5
1,684,626	+				+0.2
1,684,634	-				-1.0
1,684,643	-				-2.0
1,684,645	+				+0.5
1,684,649	+				-1.3
1,684,652	+				+0.3
1,684,657	-				-1.7
1,684,740	+				-2.3
1,684,750	-				+1.0
1,684,777	-				-1.2
1,684,787	+				+0.6
1,684,795	-				-2.0
1,684,795	-				+0.4
1,684,797	+				-1.0
1,684,797	+				+1.4
1,684,797	+				-0.5
1,684,799	+				+0.6
1,684,805	-				-1.1
1,684,805	-				-0.5
1,684,805	-				-0.9
1,684,805	-				+0.4
1,684,807	-				-0.1
1,684,808	+				-0.1
1,684,808	+				+0.1
1,684,808	+				-0.6
1,684,808	+				-1.1
1,684,808	+				-0.7
1,684,816	-				+0.9
1,684,816	-				-1.7
1,684,816	-				+0.1
1,684,816	-				-1.1
1,684,816	-				-0.5
1,684,816	-				-0.5
1,684,816	-				-0.8
1,684,816	-				+1.1
1,684,823	+				+0.0
1,684,823	+				-1.9
1,684,827	+				+0.4
1,684,831	+				-2.1
1,684,831	+				-2.3
1,684,839	-				-1.9
1,684,839	-				-0.4
1,684,839	-				-1.4
1,684,839	-				+0.2
1,684,839	-				-0.1
1,684,850	+				-0.7
1,684,850	+				-0.9
1,684,850	+				+2.4
1,684,850	+				-2.3
1,684,850	+				-0.1
1,684,858	-				+0.7
1,684,858	-				+0.9
1,684,890	+				+0.8
1,684,890	+				-2.6
1,684,892	+				+0.6
1,684,892	+				-1.3
1,684,892	+				-1.4
1,684,892	+				-0.6
1,684,892	+				-0.1
1,684,900	-				-0.8
1,685,037	-		CCNA_01568	0.17	+0.6
1,685,075	-		CCNA_01568	0.20	-0.1
1,685,114	-		CCNA_01568	0.22	-2.2
1,685,124	+		CCNA_01568	0.23	-1.4
1,685,178	+		CCNA_01568	0.27	+2.2
1,685,186	-		CCNA_01568	0.28	-2.4
1,685,186	-		CCNA_01568	0.28	-2.0
1,685,186	-		CCNA_01568	0.28	+0.0
1,685,186	-		CCNA_01568	0.28	+0.0
1,685,186	-		CCNA_01568	0.28	-0.4
1,685,198	-		CCNA_01568	0.29	-0.4
1,685,275	+		CCNA_01568	0.34	-0.9
1,685,276	+		CCNA_01568	0.34	+1.0
1,685,322	+		CCNA_01568	0.38	+0.0
1,685,322	+		CCNA_01568	0.38	-2.5
1,685,322	+		CCNA_01568	0.38	+1.0
1,685,322	+		CCNA_01568	0.38	+0.0
1,685,322	+		CCNA_01568	0.38	+0.5
1,685,330	-		CCNA_01568	0.38	+0.6
1,685,330	-		CCNA_01568	0.38	-0.8
1,685,330	-		CCNA_01568	0.38	-3.6
1,685,339	-		CCNA_01568	0.39	-0.1
1,685,344	-		CCNA_01568	0.39	-0.6
1,685,391	+		CCNA_01568	0.43	+1.3
1,685,415	+		CCNA_01568	0.45	-0.7
1,685,419	-				+1.9
1,685,446	+		CCNA_01568	0.47	-0.4
1,685,448	+				+1.2
1,685,448	+		CCNA_01568	0.47	+0.9
1,685,454	-		CCNA_01568	0.47	+1.3
1,685,454	-		CCNA_01568	0.47	+1.2
1,685,456	-		CCNA_01568	0.48	-1.1
1,685,456	-		CCNA_01568	0.48	+0.0
1,685,456	-		CCNA_01568	0.48	-0.9
1,685,557	+		CCNA_01568	0.55	+3.0
1,685,583	-		CCNA_01568	0.57	-0.9
1,685,583	-		CCNA_01568	0.57	-1.0
1,685,583	-		CCNA_01568	0.57	+0.0
1,685,602	+		CCNA_01568	0.58	+2.7
1,685,619	+		CCNA_01568	0.59	-0.4
1,685,621	+		CCNA_01568	0.60	+0.8
1,685,621	+		CCNA_01568	0.60	+0.6
1,685,629	-		CCNA_01568	0.60	-0.6
1,685,629	-		CCNA_01568	0.60	-2.1
1,685,648	-		CCNA_01568	0.62	-0.9