Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS19350 and BPHYT_RS19355 are separated by 88 nucleotides BPHYT_RS19355 and BPHYT_RS19360 are separated by 736 nucleotides
BPHYT_RS19350: BPHYT_RS19350 - amino acid ABC transporter substrate-binding protein, at 4,347,659 to 4,348,807
_RS19350
BPHYT_RS19355: BPHYT_RS19355 - bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase, at 4,348,896 to 4,352,825
_RS19355
BPHYT_RS19360: BPHYT_RS19360 - primosome assembly protein PriA, at 4,353,562 to 4,355,799
_RS19360
Position (kb) 4348
4349
4350
4351
4352
4353 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 4347.921 kb on + strand, within BPHYT_RS19350 at 4347.933 kb on + strand, within BPHYT_RS19350 at 4347.934 kb on - strand, within BPHYT_RS19350 at 4348.122 kb on + strand, within BPHYT_RS19350 at 4348.122 kb on + strand, within BPHYT_RS19350 at 4348.125 kb on + strand, within BPHYT_RS19350 at 4348.125 kb on + strand, within BPHYT_RS19350 at 4348.126 kb on - strand, within BPHYT_RS19350 at 4348.198 kb on - strand, within BPHYT_RS19350 at 4348.402 kb on - strand, within BPHYT_RS19350 at 4348.449 kb on + strand, within BPHYT_RS19350 at 4348.449 kb on + strand, within BPHYT_RS19350 at 4348.645 kb on + strand, within BPHYT_RS19350 at 4348.671 kb on + strand, within BPHYT_RS19350 at 4348.807 kb on + strand at 4348.807 kb on + strand at 4348.808 kb on - strand at 4348.808 kb on - strand at 4348.808 kb on - strand at 4348.808 kb on - strand at 4348.808 kb on - strand at 4348.822 kb on - strand at 4348.984 kb on + strand at 4349.277 kb on - strand at 4349.308 kb on + strand, within BPHYT_RS19355 at 4349.308 kb on + strand, within BPHYT_RS19355 at 4349.308 kb on + strand, within BPHYT_RS19355 at 4349.374 kb on + strand, within BPHYT_RS19355 at 4349.375 kb on - strand, within BPHYT_RS19355 at 4349.554 kb on + strand, within BPHYT_RS19355 at 4349.555 kb on - strand, within BPHYT_RS19355 at 4349.555 kb on - strand, within BPHYT_RS19355 at 4349.650 kb on + strand, within BPHYT_RS19355 at 4349.650 kb on + strand, within BPHYT_RS19355 at 4349.651 kb on - strand, within BPHYT_RS19355 at 4349.651 kb on - strand, within BPHYT_RS19355 at 4349.651 kb on - strand, within BPHYT_RS19355 at 4349.709 kb on - strand, within BPHYT_RS19355 at 4350.595 kb on + strand, within BPHYT_RS19355 at 4350.596 kb on - strand, within BPHYT_RS19355 at 4350.686 kb on + strand, within BPHYT_RS19355 at 4350.686 kb on + strand, within BPHYT_RS19355 at 4350.687 kb on - strand, within BPHYT_RS19355 at 4350.687 kb on - strand, within BPHYT_RS19355 at 4350.687 kb on - strand, within BPHYT_RS19355 at 4351.005 kb on - strand, within BPHYT_RS19355 at 4351.137 kb on - strand, within BPHYT_RS19355 at 4351.137 kb on - strand, within BPHYT_RS19355 at 4351.190 kb on - strand, within BPHYT_RS19355 at 4351.225 kb on + strand, within BPHYT_RS19355 at 4351.226 kb on - strand, within BPHYT_RS19355 at 4351.325 kb on - strand, within BPHYT_RS19355 at 4351.327 kb on + strand, within BPHYT_RS19355 at 4351.327 kb on + strand, within BPHYT_RS19355 at 4351.327 kb on + strand, within BPHYT_RS19355 at 4351.327 kb on + strand, within BPHYT_RS19355 at 4351.327 kb on + strand, within BPHYT_RS19355 at 4351.327 kb on + strand, within BPHYT_RS19355 at 4351.327 kb on + strand, within BPHYT_RS19355 at 4351.328 kb on - strand, within BPHYT_RS19355 at 4351.328 kb on - strand, within BPHYT_RS19355 at 4351.348 kb on + strand, within BPHYT_RS19355 at 4351.348 kb on + strand, within BPHYT_RS19355 at 4351.349 kb on - strand, within BPHYT_RS19355 at 4351.393 kb on + strand, within BPHYT_RS19355 at 4351.438 kb on + strand, within BPHYT_RS19355 at 4351.439 kb on - strand, within BPHYT_RS19355 at 4351.453 kb on + strand, within BPHYT_RS19355 at 4351.468 kb on + strand, within BPHYT_RS19355 at 4351.526 kb on - strand, within BPHYT_RS19355 at 4351.588 kb on + strand, within BPHYT_RS19355 at 4351.589 kb on - strand, within BPHYT_RS19355 at 4351.589 kb on - strand, within BPHYT_RS19355 at 4351.619 kb on - strand, within BPHYT_RS19355 at 4351.873 kb on + strand, within BPHYT_RS19355 at 4351.874 kb on - strand, within BPHYT_RS19355 at 4351.874 kb on - strand, within BPHYT_RS19355 at 4351.924 kb on + strand, within BPHYT_RS19355 at 4351.934 kb on - strand, within BPHYT_RS19355 at 4351.934 kb on - strand, within BPHYT_RS19355 at 4351.936 kb on + strand, within BPHYT_RS19355 at 4351.936 kb on + strand, within BPHYT_RS19355 at 4351.936 kb on + strand, within BPHYT_RS19355 at 4351.984 kb on + strand, within BPHYT_RS19355 at 4351.984 kb on + strand, within BPHYT_RS19355 at 4352.011 kb on + strand at 4352.011 kb on + strand, within BPHYT_RS19355 at 4352.012 kb on - strand, within BPHYT_RS19355 at 4352.012 kb on - strand, within BPHYT_RS19355 at 4352.022 kb on - strand, within BPHYT_RS19355 at 4352.139 kb on - strand, within BPHYT_RS19355 at 4352.528 kb on - strand at 4352.885 kb on + strand at 4353.005 kb on + strand at 4353.006 kb on - strand at 4353.035 kb on + strand at 4353.036 kb on - strand at 4353.036 kb on - strand at 4353.067 kb on + strand at 4353.077 kb on - strand at 4353.157 kb on + strand at 4353.158 kb on - strand at 4353.158 kb on - strand at 4353.203 kb on - strand at 4353.203 kb on - strand at 4353.459 kb on - strand at 4353.459 kb on - strand at 4353.471 kb on + strand at 4353.471 kb on + strand at 4353.472 kb on - strand at 4353.472 kb on - strand at 4353.472 kb on - strand at 4353.474 kb on - strand at 4353.533 kb on + strand at 4353.534 kb on - strand at 4353.534 kb on - strand at 4353.563 kb on + strand at 4353.563 kb on + strand at 4353.563 kb on + strand at 4353.564 kb on - strand at 4353.564 kb on - strand at 4353.564 kb on - strand at 4353.564 kb on - strand at 4353.564 kb on - strand at 4353.564 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 4,347,921 + BPHYT_RS19350 0.23 -0.2 4,347,933 + BPHYT_RS19350 0.24 +0.5 4,347,934 - BPHYT_RS19350 0.24 -0.1 4,348,122 + BPHYT_RS19350 0.40 -0.1 4,348,122 + BPHYT_RS19350 0.40 -0.5 4,348,125 + BPHYT_RS19350 0.41 -0.9 4,348,125 + BPHYT_RS19350 0.41 -0.4 4,348,126 - BPHYT_RS19350 0.41 -0.4 4,348,198 - BPHYT_RS19350 0.47 +0.3 4,348,402 - BPHYT_RS19350 0.65 +0.1 4,348,449 + BPHYT_RS19350 0.69 -0.4 4,348,449 + BPHYT_RS19350 0.69 +1.1 4,348,645 + BPHYT_RS19350 0.86 -0.1 4,348,671 + BPHYT_RS19350 0.88 -0.2 4,348,807 + -0.2 4,348,807 + +0.4 4,348,808 - -0.7 4,348,808 - +0.0 4,348,808 - -0.0 4,348,808 - -0.4 4,348,808 - -1.1 4,348,822 - -0.1 4,348,984 + +3.5 4,349,277 - +3.5 4,349,308 + BPHYT_RS19355 0.10 +3.6 4,349,308 + BPHYT_RS19355 0.10 +3.2 4,349,308 + BPHYT_RS19355 0.10 +4.0 4,349,374 + BPHYT_RS19355 0.12 +3.5 4,349,375 - BPHYT_RS19355 0.12 +3.2 4,349,554 + BPHYT_RS19355 0.17 +3.7 4,349,555 - BPHYT_RS19355 0.17 +3.5 4,349,555 - BPHYT_RS19355 0.17 +3.5 4,349,650 + BPHYT_RS19355 0.19 +3.3 4,349,650 + BPHYT_RS19355 0.19 +3.6 4,349,651 - BPHYT_RS19355 0.19 +3.5 4,349,651 - BPHYT_RS19355 0.19 +3.8 4,349,651 - BPHYT_RS19355 0.19 +3.7 4,349,709 - BPHYT_RS19355 0.21 +3.0 4,350,595 + BPHYT_RS19355 0.43 +2.7 4,350,596 - BPHYT_RS19355 0.43 +2.1 4,350,686 + BPHYT_RS19355 0.46 +4.2 4,350,686 + BPHYT_RS19355 0.46 +3.7 4,350,687 - BPHYT_RS19355 0.46 +2.5 4,350,687 - BPHYT_RS19355 0.46 +2.9 4,350,687 - BPHYT_RS19355 0.46 +2.5 4,351,005 - BPHYT_RS19355 0.54 +2.2 4,351,137 - BPHYT_RS19355 0.57 +3.3 4,351,137 - BPHYT_RS19355 0.57 +3.1 4,351,190 - BPHYT_RS19355 0.58 +4.1 4,351,225 + BPHYT_RS19355 0.59 +3.4 4,351,226 - BPHYT_RS19355 0.59 +1.0 4,351,325 - BPHYT_RS19355 0.62 +2.6 4,351,327 + BPHYT_RS19355 0.62 +3.0 4,351,327 + BPHYT_RS19355 0.62 +2.2 4,351,327 + BPHYT_RS19355 0.62 +2.3 4,351,327 + BPHYT_RS19355 0.62 +3.8 4,351,327 + BPHYT_RS19355 0.62 +2.7 4,351,327 + BPHYT_RS19355 0.62 +3.7 4,351,327 + BPHYT_RS19355 0.62 +3.6 4,351,328 - BPHYT_RS19355 0.62 +3.2 4,351,328 - BPHYT_RS19355 0.62 +3.7 4,351,348 + BPHYT_RS19355 0.62 +3.5 4,351,348 + BPHYT_RS19355 0.62 +2.8 4,351,349 - BPHYT_RS19355 0.62 +3.0 4,351,393 + BPHYT_RS19355 0.64 +3.7 4,351,438 + BPHYT_RS19355 0.65 +4.0 4,351,439 - BPHYT_RS19355 0.65 +3.8 4,351,453 + BPHYT_RS19355 0.65 +3.6 4,351,468 + BPHYT_RS19355 0.65 +3.2 4,351,526 - BPHYT_RS19355 0.67 +2.3 4,351,588 + BPHYT_RS19355 0.68 +3.3 4,351,589 - BPHYT_RS19355 0.69 +3.6 4,351,589 - BPHYT_RS19355 0.69 +3.6 4,351,619 - BPHYT_RS19355 0.69 +2.6 4,351,873 + BPHYT_RS19355 0.76 +3.8 4,351,874 - BPHYT_RS19355 0.76 +3.5 4,351,874 - BPHYT_RS19355 0.76 +3.9 4,351,924 + BPHYT_RS19355 0.77 +3.7 4,351,934 - BPHYT_RS19355 0.77 +3.4 4,351,934 - BPHYT_RS19355 0.77 +3.8 4,351,936 + BPHYT_RS19355 0.77 +3.3 4,351,936 + BPHYT_RS19355 0.77 +3.4 4,351,936 + BPHYT_RS19355 0.77 +1.9 4,351,984 + BPHYT_RS19355 0.79 +3.4 4,351,984 + BPHYT_RS19355 0.79 +3.8 4,352,011 + +3.5 4,352,011 + BPHYT_RS19355 0.79 +3.0 4,352,012 - BPHYT_RS19355 0.79 +2.9 4,352,012 - BPHYT_RS19355 0.79 +3.8 4,352,022 - BPHYT_RS19355 0.80 +3.7 4,352,139 - BPHYT_RS19355 0.83 +4.0 4,352,528 - +2.4 4,352,885 + +3.8 4,353,005 + +1.6 4,353,006 - -2.9 4,353,035 + -0.3 4,353,036 - -2.1 4,353,036 - -0.1 4,353,067 + -0.2 4,353,077 - -1.8 4,353,157 + -0.2 4,353,158 - -0.4 4,353,158 - +0.1 4,353,203 - -4.0 4,353,203 - -1.5 4,353,459 - -0.8 4,353,459 - -1.1 4,353,471 + +0.1 4,353,471 + -0.2 4,353,472 - -1.5 4,353,472 - -0.6 4,353,472 - -1.4 4,353,474 - -1.2 4,353,533 + -1.9 4,353,534 - -0.8 4,353,534 - -0.9 4,353,563 + +0.2 4,353,563 + -0.2 4,353,563 + -0.2 4,353,564 - -0.8 4,353,564 - +0.4 4,353,564 - -0.3 4,353,564 - +0.2 4,353,564 - -2.1 4,353,564 - -0.6
Or see this region's nucleotide sequence