Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_15010 and AO356_15015 overlap by 16 nucleotides AO356_15015 and AO356_15020 are separated by 11 nucleotides
AO356_15010: AO356_15010 - hypothetical protein, at 3,393,125 to 3,394,834
_15010
AO356_15015: AO356_15015 - hypothetical protein, at 3,394,819 to 3,395,478
_15015
AO356_15020: AO356_15020 - hypothetical protein, at 3,395,490 to 3,400,043
_15020
Position (kb)
3394
3395
3396 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3394.102 kb on - strand, within AO356_15010 at 3394.235 kb on + strand, within AO356_15010 at 3394.406 kb on - strand, within AO356_15010 at 3394.406 kb on - strand, within AO356_15010 at 3394.406 kb on - strand, within AO356_15010 at 3394.424 kb on + strand, within AO356_15010 at 3394.424 kb on + strand, within AO356_15010 at 3394.425 kb on - strand, within AO356_15010 at 3394.616 kb on + strand, within AO356_15010 at 3394.697 kb on + strand at 3394.697 kb on + strand at 3394.697 kb on + strand at 3394.698 kb on - strand at 3394.698 kb on - strand at 3394.715 kb on + strand at 3394.748 kb on + strand at 3394.749 kb on - strand at 3394.757 kb on + strand at 3394.757 kb on + strand at 3394.925 kb on + strand, within AO356_15015 at 3394.925 kb on + strand, within AO356_15015 at 3394.925 kb on + strand, within AO356_15015 at 3394.926 kb on - strand, within AO356_15015 at 3394.926 kb on - strand, within AO356_15015 at 3394.926 kb on - strand, within AO356_15015 at 3395.006 kb on - strand, within AO356_15015 at 3395.105 kb on - strand, within AO356_15015 at 3395.188 kb on + strand, within AO356_15015 at 3395.320 kb on + strand, within AO356_15015 at 3395.320 kb on + strand, within AO356_15015 at 3395.321 kb on - strand, within AO356_15015 at 3395.329 kb on + strand, within AO356_15015 at 3395.329 kb on + strand, within AO356_15015 at 3395.330 kb on - strand, within AO356_15015 at 3395.343 kb on + strand, within AO356_15015 at 3395.343 kb on + strand, within AO356_15015 at 3395.343 kb on + strand, within AO356_15015 at 3395.343 kb on + strand, within AO356_15015 at 3395.343 kb on + strand, within AO356_15015 at 3395.343 kb on + strand, within AO356_15015 at 3395.343 kb on + strand, within AO356_15015 at 3395.343 kb on + strand, within AO356_15015 at 3395.344 kb on - strand, within AO356_15015 at 3395.344 kb on - strand, within AO356_15015 at 3395.344 kb on - strand, within AO356_15015 at 3395.344 kb on - strand, within AO356_15015 at 3395.344 kb on - strand, within AO356_15015 at 3395.344 kb on - strand, within AO356_15015 at 3395.344 kb on - strand, within AO356_15015 at 3395.344 kb on - strand, within AO356_15015 at 3395.344 kb on - strand, within AO356_15015 at 3395.352 kb on + strand, within AO356_15015 at 3395.703 kb on + strand at 3395.832 kb on + strand at 3395.832 kb on + strand at 3395.833 kb on - strand at 3395.833 kb on - strand at 3395.833 kb on - strand at 3395.889 kb on + strand at 3395.890 kb on - strand at 3395.890 kb on - strand at 3395.964 kb on + strand, within AO356_15020 at 3395.964 kb on + strand, within AO356_15020 at 3395.965 kb on - strand, within AO356_15020 at 3395.965 kb on - strand, within AO356_15020 at 3395.965 kb on - strand, within AO356_15020 at 3396.120 kb on + strand, within AO356_15020 at 3396.120 kb on + strand, within AO356_15020 at 3396.121 kb on - strand, within AO356_15020 at 3396.153 kb on + strand, within AO356_15020 at 3396.154 kb on - strand, within AO356_15020 at 3396.154 kb on - strand, within AO356_15020 at 3396.154 kb on - strand, within AO356_15020 at 3396.154 kb on - strand, within AO356_15020 at 3396.154 kb on - strand, within AO356_15020 at 3396.424 kb on + strand, within AO356_15020 at 3396.444 kb on + strand, within AO356_15020 at 3396.447 kb on + strand, within AO356_15020 at 3396.448 kb on - strand, within AO356_15020 at 3396.463 kb on - strand, within AO356_15020 at 3396.477 kb on + strand, within AO356_15020 at 3396.477 kb on + strand, within AO356_15020 at 3396.478 kb on - strand, within AO356_15020
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 3,394,102 - AO356_15010 0.57 +0.5 3,394,235 + AO356_15010 0.65 +0.3 3,394,406 - AO356_15010 0.75 +0.5 3,394,406 - AO356_15010 0.75 +0.7 3,394,406 - AO356_15010 0.75 -0.2 3,394,424 + AO356_15010 0.76 -0.4 3,394,424 + AO356_15010 0.76 -0.2 3,394,425 - AO356_15010 0.76 -0.2 3,394,616 + AO356_15010 0.87 +1.7 3,394,697 + -0.2 3,394,697 + -0.2 3,394,697 + +0.5 3,394,698 - +0.3 3,394,698 - -0.4 3,394,715 + +0.8 3,394,748 + +1.2 3,394,749 - -1.3 3,394,757 + -0.3 3,394,757 + +0.3 3,394,925 + AO356_15015 0.16 +0.5 3,394,925 + AO356_15015 0.16 +0.1 3,394,925 + AO356_15015 0.16 +1.9 3,394,926 - AO356_15015 0.16 +0.0 3,394,926 - AO356_15015 0.16 +0.2 3,394,926 - AO356_15015 0.16 +0.9 3,395,006 - AO356_15015 0.28 +0.3 3,395,105 - AO356_15015 0.43 +0.3 3,395,188 + AO356_15015 0.56 +0.2 3,395,320 + AO356_15015 0.76 +0.5 3,395,320 + AO356_15015 0.76 +0.4 3,395,321 - AO356_15015 0.76 -0.2 3,395,329 + AO356_15015 0.77 +0.5 3,395,329 + AO356_15015 0.77 -1.5 3,395,330 - AO356_15015 0.77 +0.5 3,395,343 + AO356_15015 0.79 +0.7 3,395,343 + AO356_15015 0.79 +1.0 3,395,343 + AO356_15015 0.79 +1.5 3,395,343 + AO356_15015 0.79 -0.5 3,395,343 + AO356_15015 0.79 -1.5 3,395,343 + AO356_15015 0.79 +0.2 3,395,343 + AO356_15015 0.79 -0.8 3,395,343 + AO356_15015 0.79 -0.2 3,395,344 - AO356_15015 0.80 +0.4 3,395,344 - AO356_15015 0.80 +0.7 3,395,344 - AO356_15015 0.80 -0.3 3,395,344 - AO356_15015 0.80 +0.1 3,395,344 - AO356_15015 0.80 +0.2 3,395,344 - AO356_15015 0.80 -2.1 3,395,344 - AO356_15015 0.80 +0.4 3,395,344 - AO356_15015 0.80 -0.6 3,395,344 - AO356_15015 0.80 +0.3 3,395,352 + AO356_15015 0.81 -0.2 3,395,703 + +0.3 3,395,832 + +0.2 3,395,832 + +0.5 3,395,833 - -0.9 3,395,833 - +0.7 3,395,833 - -0.5 3,395,889 + +1.8 3,395,890 - +0.1 3,395,890 - -0.7 3,395,964 + AO356_15020 0.10 -0.5 3,395,964 + AO356_15020 0.10 +0.5 3,395,965 - AO356_15020 0.10 -0.1 3,395,965 - AO356_15020 0.10 -0.9 3,395,965 - AO356_15020 0.10 -0.2 3,396,120 + AO356_15020 0.14 +0.1 3,396,120 + AO356_15020 0.14 +0.9 3,396,121 - AO356_15020 0.14 -1.3 3,396,153 + AO356_15020 0.15 +0.7 3,396,154 - AO356_15020 0.15 +0.3 3,396,154 - AO356_15020 0.15 +0.2 3,396,154 - AO356_15020 0.15 +0.7 3,396,154 - AO356_15020 0.15 +0.7 3,396,154 - AO356_15020 0.15 +1.2 3,396,424 + AO356_15020 0.21 -0.2 3,396,444 + AO356_15020 0.21 -1.0 3,396,447 + AO356_15020 0.21 +0.6 3,396,448 - AO356_15020 0.21 -0.1 3,396,463 - AO356_15020 0.21 +0.1 3,396,477 + AO356_15020 0.22 +1.4 3,396,477 + AO356_15020 0.22 +0.8 3,396,478 - AO356_15020 0.22 -0.0
Or see this region's nucleotide sequence