Strain Fitness in Sinorhizobium meliloti 1021 around SMc04270

Experiment: Glycerol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMc04268 and SMc04270 overlap by 4 nucleotidesSMc04270 and SMc04273 are separated by 236 nucleotides SMc04268: SMc04268 - lipid A biosynthesis lauroyl acyltransferase, at 2,096,413 to 2,097,351 SMc04268 SMc04270: SMc04270 - dehydrogenase, at 2,097,348 to 2,098,376 SMc04270 SMc04273: SMc04273 - 3-oxoacyl-ACP synthase, at 2,098,613 to 2,099,896 SMc04273 Position (kb) 2097 2098 2099Strain fitness (log2 ratio) -1 0 1at 2098.394 kb on - strandat 2098.429 kb on - strandat 2098.429 kb on - strandat 2098.475 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycerol (C)
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2,098,394 - -0.3
2,098,429 - -0.5
2,098,429 - -0.2
2,098,475 - +0.1

Or see this region's nucleotide sequence