Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03130 and SMc03129 are separated by 67 nucleotides SMc03129 and SMc03128 are separated by 12 nucleotides SMc03128 and SMc03127 are separated by 17 nucleotides
SMc03130: SMc03130 - hypothetical protein, at 3,199,470 to 3,200,378
SMc03130
SMc03129: SMc03129 - hypothetical protein, at 3,200,446 to 3,201,213
SMc03129
SMc03128: SMc03128 - ABC transporter permease, at 3,201,226 to 3,202,107
SMc03128
SMc03127: SMc03127 - ABC transporter permease, at 3,202,125 to 3,203,051
SMc03127
Position (kb)
3200
3201
3202 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3199.550 kb on - strand at 3199.688 kb on - strand, within SMc03130 at 3199.688 kb on - strand, within SMc03130 at 3199.699 kb on + strand, within SMc03130 at 3199.699 kb on + strand, within SMc03130 at 3199.700 kb on - strand, within SMc03130 at 3199.700 kb on - strand, within SMc03130 at 3199.700 kb on - strand, within SMc03130 at 3199.795 kb on + strand, within SMc03130 at 3199.796 kb on - strand, within SMc03130 at 3199.810 kb on + strand, within SMc03130 at 3199.810 kb on + strand, within SMc03130 at 3199.811 kb on - strand, within SMc03130 at 3199.811 kb on - strand, within SMc03130 at 3199.897 kb on + strand, within SMc03130 at 3199.898 kb on - strand, within SMc03130 at 3200.416 kb on + strand at 3200.417 kb on - strand at 3200.424 kb on - strand at 3200.461 kb on + strand at 3200.601 kb on + strand, within SMc03129 at 3200.613 kb on + strand, within SMc03129 at 3200.659 kb on + strand, within SMc03129 at 3200.660 kb on - strand, within SMc03129 at 3200.873 kb on + strand, within SMc03129 at 3200.939 kb on - strand, within SMc03129 at 3200.967 kb on + strand, within SMc03129 at 3200.968 kb on - strand, within SMc03129 at 3201.044 kb on - strand, within SMc03129 at 3201.344 kb on + strand, within SMc03128 at 3201.345 kb on - strand, within SMc03128 at 3201.947 kb on + strand, within SMc03128 at 3201.947 kb on + strand, within SMc03128 at 3202.127 kb on - strand at 3202.127 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 3,199,550 - -0.0 3,199,688 - SMc03130 0.24 -0.7 3,199,688 - SMc03130 0.24 +0.2 3,199,699 + SMc03130 0.25 +0.8 3,199,699 + SMc03130 0.25 -0.4 3,199,700 - SMc03130 0.25 -0.9 3,199,700 - SMc03130 0.25 -1.1 3,199,700 - SMc03130 0.25 -1.8 3,199,795 + SMc03130 0.36 -0.8 3,199,796 - SMc03130 0.36 +0.5 3,199,810 + SMc03130 0.37 -0.0 3,199,810 + SMc03130 0.37 +0.4 3,199,811 - SMc03130 0.38 +0.4 3,199,811 - SMc03130 0.38 -0.6 3,199,897 + SMc03130 0.47 +0.2 3,199,898 - SMc03130 0.47 -2.4 3,200,416 + -0.4 3,200,417 - -0.6 3,200,424 - -0.5 3,200,461 + -0.8 3,200,601 + SMc03129 0.20 +0.0 3,200,613 + SMc03129 0.22 -0.6 3,200,659 + SMc03129 0.28 -0.0 3,200,660 - SMc03129 0.28 -0.3 3,200,873 + SMc03129 0.56 -0.7 3,200,939 - SMc03129 0.64 -0.0 3,200,967 + SMc03129 0.68 -0.1 3,200,968 - SMc03129 0.68 -0.0 3,201,044 - SMc03129 0.78 -0.9 3,201,344 + SMc03128 0.13 -0.6 3,201,345 - SMc03128 0.13 +3.4 3,201,947 + SMc03128 0.82 +0.2 3,201,947 + SMc03128 0.82 -0.1 3,202,127 - +0.3 3,202,127 - +0.2
Or see this region's nucleotide sequence