Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02341 and SMc02342 are separated by 26 nucleotides SMc02342 and SMc02343 are separated by 93 nucleotides
SMc02341: SMc02341 - sugar kinase, at 2,762,142 to 2,763,575
SMc02341
SMc02342: SMc02342 - transketolase, at 2,763,602 to 2,765,596
SMc02342
SMc02343: SMc02343 - transport transmembrane protein, at 2,765,690 to 2,767,129
SMc02343
Position (kb)
2763
2764
2765
2766 Strain fitness (log2 ratio)
-1
0
1 at 2762.642 kb on - strand, within SMc02341 at 2762.722 kb on + strand, within SMc02341 at 2762.746 kb on + strand, within SMc02341 at 2762.755 kb on + strand, within SMc02341 at 2763.049 kb on + strand, within SMc02341 at 2763.049 kb on + strand, within SMc02341 at 2763.050 kb on - strand, within SMc02341 at 2763.152 kb on - strand, within SMc02341 at 2763.152 kb on - strand, within SMc02341 at 2763.152 kb on - strand, within SMc02341 at 2763.485 kb on - strand at 2763.572 kb on - strand at 2763.572 kb on - strand at 2763.572 kb on - strand at 2763.737 kb on + strand at 2763.738 kb on + strand at 2763.739 kb on - strand at 2763.770 kb on + strand at 2763.770 kb on + strand at 2763.807 kb on + strand, within SMc02342 at 2763.808 kb on - strand, within SMc02342 at 2763.972 kb on + strand, within SMc02342 at 2763.973 kb on - strand, within SMc02342 at 2764.290 kb on + strand, within SMc02342 at 2764.291 kb on - strand, within SMc02342 at 2764.303 kb on - strand, within SMc02342 at 2764.371 kb on + strand, within SMc02342 at 2764.371 kb on + strand, within SMc02342 at 2764.372 kb on - strand, within SMc02342 at 2764.372 kb on - strand, within SMc02342 at 2764.372 kb on - strand, within SMc02342 at 2764.372 kb on - strand, within SMc02342 at 2764.613 kb on - strand, within SMc02342 at 2764.656 kb on + strand, within SMc02342 at 2764.656 kb on + strand, within SMc02342 at 2764.657 kb on - strand, within SMc02342 at 2765.052 kb on + strand, within SMc02342 at 2765.111 kb on + strand, within SMc02342 at 2765.111 kb on + strand, within SMc02342 at 2765.147 kb on + strand, within SMc02342 at 2765.148 kb on + strand, within SMc02342 at 2765.149 kb on - strand, within SMc02342 at 2765.149 kb on - strand, within SMc02342 at 2765.351 kb on - strand, within SMc02342 at 2765.382 kb on + strand, within SMc02342 at 2765.596 kb on + strand at 2765.596 kb on + strand at 2765.597 kb on - strand at 2765.886 kb on - strand, within SMc02343
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 2,762,642 - SMc02341 0.35 -0.3 2,762,722 + SMc02341 0.40 +0.1 2,762,746 + SMc02341 0.42 +0.2 2,762,755 + SMc02341 0.43 -0.1 2,763,049 + SMc02341 0.63 -0.3 2,763,049 + SMc02341 0.63 +1.0 2,763,050 - SMc02341 0.63 +0.2 2,763,152 - SMc02341 0.70 -0.8 2,763,152 - SMc02341 0.70 +1.1 2,763,152 - SMc02341 0.70 -0.3 2,763,485 - +0.4 2,763,572 - +0.7 2,763,572 - +0.0 2,763,572 - +0.1 2,763,737 + -0.8 2,763,738 + +0.2 2,763,739 - -0.1 2,763,770 + +0.2 2,763,770 + -0.2 2,763,807 + SMc02342 0.10 +0.0 2,763,808 - SMc02342 0.10 -0.0 2,763,972 + SMc02342 0.19 +0.4 2,763,973 - SMc02342 0.19 +1.1 2,764,290 + SMc02342 0.34 -0.4 2,764,291 - SMc02342 0.35 -0.1 2,764,303 - SMc02342 0.35 -0.3 2,764,371 + SMc02342 0.39 -0.6 2,764,371 + SMc02342 0.39 -0.2 2,764,372 - SMc02342 0.39 -0.7 2,764,372 - SMc02342 0.39 -1.1 2,764,372 - SMc02342 0.39 +0.3 2,764,372 - SMc02342 0.39 +0.0 2,764,613 - SMc02342 0.51 -0.6 2,764,656 + SMc02342 0.53 +0.4 2,764,656 + SMc02342 0.53 -0.8 2,764,657 - SMc02342 0.53 +0.6 2,765,052 + SMc02342 0.73 +0.3 2,765,111 + SMc02342 0.76 -0.1 2,765,111 + SMc02342 0.76 +0.2 2,765,147 + SMc02342 0.77 +0.7 2,765,148 + SMc02342 0.77 -0.6 2,765,149 - SMc02342 0.78 +0.0 2,765,149 - SMc02342 0.78 -0.2 2,765,351 - SMc02342 0.88 +0.3 2,765,382 + SMc02342 0.89 -0.1 2,765,596 + -0.5 2,765,596 + -0.2 2,765,597 - +0.5 2,765,886 - SMc02343 0.14 +0.2
Or see this region's nucleotide sequence