Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02105 and SMc02104 are separated by 4 nucleotides SMc02104 and SMc02103 are separated by 13 nucleotides SMc02103 and SMc02102 are separated by 141 nucleotides
SMc02105: SMc02105 - hypothetical protein, at 1,604,216 to 1,605,403
SMc02105
SMc02104: SMc02104 - hypothetical protein, at 1,605,408 to 1,606,133
SMc02104
SMc02103: SMc02103 - hypothetical protein, at 1,606,147 to 1,606,611
SMc02103
SMc02102: SMc02102 - hypothetical protein, at 1,606,753 to 1,607,571
SMc02102
Position (kb)
1605
1606
1607 Strain fitness (log2 ratio)
-2
-1
0
1 at 1604.445 kb on + strand, within SMc02105 at 1604.463 kb on + strand, within SMc02105 at 1604.464 kb on - strand, within SMc02105 at 1604.520 kb on + strand, within SMc02105 at 1604.520 kb on + strand, within SMc02105 at 1604.629 kb on - strand, within SMc02105 at 1604.629 kb on - strand, within SMc02105 at 1604.683 kb on - strand, within SMc02105 at 1604.683 kb on - strand, within SMc02105 at 1604.683 kb on - strand, within SMc02105 at 1604.683 kb on - strand, within SMc02105 at 1604.748 kb on - strand, within SMc02105 at 1604.839 kb on - strand, within SMc02105 at 1604.872 kb on + strand, within SMc02105 at 1605.135 kb on + strand, within SMc02105 at 1605.136 kb on - strand, within SMc02105 at 1605.136 kb on - strand, within SMc02105 at 1605.162 kb on + strand, within SMc02105 at 1605.163 kb on - strand, within SMc02105 at 1605.163 kb on - strand, within SMc02105 at 1605.273 kb on + strand, within SMc02105 at 1605.274 kb on - strand, within SMc02105 at 1605.297 kb on + strand at 1605.298 kb on - strand at 1605.298 kb on - strand at 1605.298 kb on - strand at 1605.378 kb on - strand at 1605.378 kb on - strand at 1606.125 kb on - strand at 1606.503 kb on - strand, within SMc02103 at 1606.527 kb on - strand, within SMc02103 at 1606.527 kb on - strand, within SMc02103 at 1606.536 kb on - strand, within SMc02103 at 1606.536 kb on - strand, within SMc02103 at 1606.909 kb on + strand, within SMc02102 at 1606.909 kb on + strand, within SMc02102 at 1606.924 kb on + strand, within SMc02102 at 1606.954 kb on + strand, within SMc02102 at 1606.955 kb on - strand, within SMc02102 at 1606.955 kb on - strand, within SMc02102 at 1607.033 kb on - strand, within SMc02102
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 1,604,445 + SMc02105 0.19 -2.0 1,604,463 + SMc02105 0.21 -0.1 1,604,464 - SMc02105 0.21 +0.2 1,604,520 + SMc02105 0.26 +1.0 1,604,520 + SMc02105 0.26 +0.5 1,604,629 - SMc02105 0.35 -0.4 1,604,629 - SMc02105 0.35 +0.1 1,604,683 - SMc02105 0.39 +0.4 1,604,683 - SMc02105 0.39 -0.6 1,604,683 - SMc02105 0.39 -0.6 1,604,683 - SMc02105 0.39 +0.1 1,604,748 - SMc02105 0.45 -0.3 1,604,839 - SMc02105 0.52 +0.1 1,604,872 + SMc02105 0.55 +0.1 1,605,135 + SMc02105 0.77 +0.1 1,605,136 - SMc02105 0.77 +0.0 1,605,136 - SMc02105 0.77 +0.3 1,605,162 + SMc02105 0.80 -0.8 1,605,163 - SMc02105 0.80 +0.2 1,605,163 - SMc02105 0.80 +0.1 1,605,273 + SMc02105 0.89 +0.1 1,605,274 - SMc02105 0.89 +0.0 1,605,297 + +0.1 1,605,298 - +0.1 1,605,298 - +0.2 1,605,298 - +0.3 1,605,378 - -0.2 1,605,378 - -0.0 1,606,125 - -0.0 1,606,503 - SMc02103 0.77 -0.3 1,606,527 - SMc02103 0.82 -0.0 1,606,527 - SMc02103 0.82 -1.2 1,606,536 - SMc02103 0.84 -0.7 1,606,536 - SMc02103 0.84 +0.4 1,606,909 + SMc02102 0.19 -1.3 1,606,909 + SMc02102 0.19 -0.5 1,606,924 + SMc02102 0.21 -0.5 1,606,954 + SMc02102 0.25 -0.8 1,606,955 - SMc02102 0.25 +0.5 1,606,955 - SMc02102 0.25 +1.5 1,607,033 - SMc02102 0.34 -1.2
Or see this region's nucleotide sequence