Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20766 and SM_b20767 are separated by 167 nucleotides SM_b20767 and SM_b20768 are separated by 16 nucleotides
SM_b20766: SM_b20766 - transposase of insertion sequence ISRm22 protein, at 1,557,312 to 1,558,475
_b20766
SM_b20767: SM_b20767 - dihydroxyacetone kinase, at 1,558,643 to 1,560,361
_b20767
SM_b20768: SM_b20768 - hypothetical protein, at 1,560,378 to 1,561,319
_b20768
Position (kb)
1558
1559
1560
1561 Strain fitness (log2 ratio)
-1
0
1
2 at 1558.609 kb on + strand at 1558.610 kb on - strand at 1559.096 kb on + strand, within SM_b20767 at 1559.571 kb on + strand, within SM_b20767 at 1559.572 kb on - strand, within SM_b20767 at 1559.651 kb on - strand, within SM_b20767 at 1560.294 kb on + strand at 1560.294 kb on + strand at 1560.295 kb on - strand at 1560.404 kb on + strand at 1560.405 kb on - strand at 1560.405 kb on - strand at 1560.415 kb on + strand at 1560.416 kb on - strand at 1560.458 kb on - strand at 1560.595 kb on + strand, within SM_b20768 at 1560.595 kb on + strand, within SM_b20768 at 1560.613 kb on + strand, within SM_b20768 at 1560.613 kb on + strand, within SM_b20768 at 1560.614 kb on - strand, within SM_b20768 at 1560.766 kb on + strand, within SM_b20768 at 1560.766 kb on + strand, within SM_b20768 at 1560.767 kb on - strand, within SM_b20768 at 1560.767 kb on - strand, within SM_b20768 at 1560.778 kb on + strand, within SM_b20768 at 1560.778 kb on + strand, within SM_b20768 at 1560.779 kb on - strand, within SM_b20768 at 1560.779 kb on - strand, within SM_b20768 at 1561.003 kb on + strand, within SM_b20768 at 1561.035 kb on + strand, within SM_b20768 at 1561.035 kb on + strand, within SM_b20768 at 1561.035 kb on + strand, within SM_b20768 at 1561.036 kb on - strand, within SM_b20768 at 1561.036 kb on - strand, within SM_b20768 at 1561.261 kb on + strand at 1561.348 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 1,558,609 + +1.0 1,558,610 - +0.3 1,559,096 + SM_b20767 0.26 +0.3 1,559,571 + SM_b20767 0.54 -0.0 1,559,572 - SM_b20767 0.54 -0.8 1,559,651 - SM_b20767 0.59 -0.3 1,560,294 + -0.4 1,560,294 + -0.4 1,560,295 - -0.4 1,560,404 + +0.5 1,560,405 - -1.1 1,560,405 - +1.3 1,560,415 + -0.3 1,560,416 - +2.0 1,560,458 - -0.4 1,560,595 + SM_b20768 0.23 +0.1 1,560,595 + SM_b20768 0.23 -0.5 1,560,613 + SM_b20768 0.25 +0.6 1,560,613 + SM_b20768 0.25 +1.0 1,560,614 - SM_b20768 0.25 +0.7 1,560,766 + SM_b20768 0.41 -0.2 1,560,766 + SM_b20768 0.41 -0.2 1,560,767 - SM_b20768 0.41 +0.0 1,560,767 - SM_b20768 0.41 +0.2 1,560,778 + SM_b20768 0.42 -1.6 1,560,778 + SM_b20768 0.42 -1.2 1,560,779 - SM_b20768 0.43 +1.0 1,560,779 - SM_b20768 0.43 -0.1 1,561,003 + SM_b20768 0.66 -0.2 1,561,035 + SM_b20768 0.70 -0.1 1,561,035 + SM_b20768 0.70 -0.1 1,561,035 + SM_b20768 0.70 -0.5 1,561,036 - SM_b20768 0.70 +0.0 1,561,036 - SM_b20768 0.70 -0.1 1,561,261 + +0.1 1,561,348 + -0.2
Or see this region's nucleotide sequence