Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11965

Experiment: R2A control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A control
2,651,839	+		LRK54_RS11955	0.58	-0.3
2,651,839	+		LRK54_RS11955	0.58	-0.5
2,651,839	+		LRK54_RS11955	0.58	-0.5
2,651,839	+		LRK54_RS11955	0.58	+1.9
2,651,839	+		LRK54_RS11955	0.58	-2.7
2,651,839	+		LRK54_RS11955	0.58	-0.4
2,651,839	+		LRK54_RS11955	0.58	-0.8
2,651,839	+		LRK54_RS11955	0.58	-0.5
2,651,839	+		LRK54_RS11955	0.58	+0.1
2,651,839	+		LRK54_RS11955	0.58	-0.4
2,651,839	+		LRK54_RS11955	0.58	-0.7
2,651,839	+		LRK54_RS11955	0.58	-0.4
2,651,839	+		LRK54_RS11955	0.58	-0.9
2,651,839	+		LRK54_RS11955	0.58	-2.2
2,651,839	+		LRK54_RS11955	0.58	-0.4
2,651,839	+		LRK54_RS11955	0.58	+1.2
2,651,839	+		LRK54_RS11955	0.58	+0.6
2,651,839	+		LRK54_RS11955	0.58	-1.6
2,651,839	+		LRK54_RS11955	0.58	+0.0
2,651,839	+		LRK54_RS11955	0.58	-0.1
2,651,839	+		LRK54_RS11955	0.58	-0.6
2,651,839	+		LRK54_RS11955	0.58	+0.9
2,651,839	+		LRK54_RS11955	0.58	-0.7
2,651,839	+		LRK54_RS11955	0.58	-0.7
2,651,839	+		LRK54_RS11955	0.58	+0.1
2,651,839	+		LRK54_RS11955	0.58	-0.7
2,651,839	+		LRK54_RS11955	0.58	+2.1
2,651,839	+		LRK54_RS11955	0.58	+0.9
2,651,839	+		LRK54_RS11955	0.58	-1.4
2,651,839	+		LRK54_RS11955	0.58	+0.7
2,651,839	+		LRK54_RS11955	0.58	-1.4
2,651,839	+		LRK54_RS11955	0.58	+0.1
2,651,839	+		LRK54_RS11955	0.58	-0.1
2,651,839	+		LRK54_RS11955	0.58	+0.1
2,651,839	+		LRK54_RS11955	0.58	-1.3
2,651,839	+		LRK54_RS11955	0.58	-1.3
2,651,839	+		LRK54_RS11955	0.58	-0.3
2,651,839	+		LRK54_RS11955	0.58	+0.2
2,651,839	+		LRK54_RS11955	0.58	-0.3
2,651,840	-		LRK54_RS11955	0.58	-0.3
2,651,840	-		LRK54_RS11955	0.58	-0.7
2,651,840	-		LRK54_RS11955	0.58	-0.3
2,651,840	-		LRK54_RS11955	0.58	+0.6
2,651,840	-		LRK54_RS11955	0.58	-0.1
2,651,840	-		LRK54_RS11955	0.58	-0.2
2,651,840	-		LRK54_RS11955	0.58	+0.8
2,651,840	-		LRK54_RS11955	0.58	-0.5
2,651,840	-		LRK54_RS11955	0.58	+1.1
2,651,840	-		LRK54_RS11955	0.58	+0.7
2,651,840	-		LRK54_RS11955	0.58	+0.7
2,651,840	-		LRK54_RS11955	0.58	-0.1
2,651,840	-		LRK54_RS11955	0.58	+0.1
2,651,840	-		LRK54_RS11955	0.58	+0.3
2,651,840	-		LRK54_RS11955	0.58	+0.4
2,651,840	-		LRK54_RS11955	0.58	-0.1
2,651,840	-		LRK54_RS11955	0.58	-0.6
2,651,840	-		LRK54_RS11955	0.58	+0.2
2,651,840	-		LRK54_RS11955	0.58	+0.2
2,651,840	-		LRK54_RS11955	0.58	-0.3
2,651,840	-		LRK54_RS11955	0.58	-0.7
2,651,840	-		LRK54_RS11955	0.58	-0.7
2,651,840	-		LRK54_RS11955	0.58	+1.1
2,651,840	-		LRK54_RS11955	0.58	+0.9
2,651,840	-		LRK54_RS11955	0.58	-0.3
2,651,840	-		LRK54_RS11955	0.58	+0.9
2,651,840	-		LRK54_RS11955	0.58	-0.5
2,651,840	-		LRK54_RS11955	0.58	-0.0
2,652,031	+		LRK54_RS11955	0.79	-0.8
2,652,031	+		LRK54_RS11955	0.79	+0.7
2,652,031	+		LRK54_RS11955	0.79	-0.4
2,652,031	+		LRK54_RS11955	0.79	+0.2
2,652,031	+		LRK54_RS11955	0.79	-0.7
2,652,032	-		LRK54_RS11955	0.79	+0.3
2,652,032	-		LRK54_RS11955	0.79	-0.3
2,652,032	-		LRK54_RS11955	0.79	-0.6
2,652,032	-		LRK54_RS11955	0.79	+0.3
2,652,032	-		LRK54_RS11955	0.79	+0.9
2,652,115	+		LRK54_RS11955	0.88	+1.1
2,652,115	+		LRK54_RS11955	0.88	-0.5
2,652,115	+		LRK54_RS11955	0.88	-0.5
2,652,115	+		LRK54_RS11955	0.88	+0.0
2,652,116	-		LRK54_RS11955	0.88	+0.2
2,652,116	-		LRK54_RS11955	0.88	-1.2
2,652,116	-		LRK54_RS11955	0.88	-0.3
2,652,116	-		LRK54_RS11955	0.88	-0.3
2,652,116	-		LRK54_RS11955	0.88	+0.6
2,652,116	-		LRK54_RS11955	0.88	-0.2
2,652,116	-		LRK54_RS11955	0.88	-0.0
2,652,136	+				-0.3
2,652,136	+				+1.3
2,652,136	+				-0.1
2,652,136	+				-1.6
2,652,136	+				-0.8
2,652,136	+				-0.4
2,652,136	+				+0.0
2,652,136	+				-0.5
2,652,136	+				-0.2
2,652,136	+				+0.0
2,652,136	+				-1.5
2,652,136	+				-0.4
2,652,136	+				-0.6
2,652,136	+				+0.1
2,652,136	+				+0.0
2,652,136	+				+0.0
2,652,136	+				-1.1
2,652,136	+				-1.3
2,652,137	-				-0.1
2,652,137	-				-0.5
2,652,137	-				+0.1
2,652,137	-				-0.5
2,652,137	-				-0.3
2,652,137	-				-0.9
2,652,137	-				+0.3
2,652,137	-				-0.7
2,652,137	-				+0.3
2,652,137	-				+0.2
2,652,137	-				+0.0
2,652,137	-				+0.4
2,652,137	-				-0.5
2,652,137	-				-0.3
2,652,137	-				+0.7
2,652,137	-				+0.1
2,652,255	+				-0.1
2,652,535	+				+0.0
2,652,535	+				-0.7
2,652,535	+				-0.7
2,652,535	+				+0.5
2,652,535	+				-2.5
2,652,535	+				-1.6
2,652,535	+				-1.1
2,652,535	+				-0.2
2,652,535	+				-0.7
2,652,535	+				+0.3
2,652,535	+				+0.2
2,652,535	+				-0.7
2,652,535	+				+0.1
2,652,536	-				+0.5
2,652,536	-				-0.7
2,652,536	-				+0.2
2,652,536	-				+0.7
2,652,536	-				-0.2
2,652,536	-				-0.8
2,652,536	-				-0.5
2,652,536	-				-1.8
2,652,536	-				-0.4
2,652,536	-				-0.5
2,652,536	-				-0.8
2,652,536	-				-1.2
2,652,536	-				-0.2
2,652,536	-				-0.4
2,652,536	-				-0.2
2,652,623	+				+0.2
2,652,623	+				-0.1
2,652,623	+				-0.7
2,652,623	+				-0.4
2,652,623	+				-0.6
2,652,623	+				+0.8
2,652,623	+				-0.5
2,652,623	+				+0.7
2,652,623	+				+0.2
2,652,624	-				+0.8
2,652,624	-				+0.0
2,652,624	-				+0.3
2,652,624	-				-0.7
2,652,624	-				+1.1
2,652,624	-				+0.2
2,652,624	-				+1.3
2,652,624	-				+0.6
2,652,624	-				+0.7
2,652,624	-				-0.4
2,652,624	-				-0.7
2,652,624	-				+1.3
2,652,624	-				+0.8
2,652,624	-				-0.3
2,652,761	+		LRK54_RS11965	0.39	-0.5
2,652,763	+		LRK54_RS11965	0.39	+0.9
2,652,763	+		LRK54_RS11965	0.39	-0.1
2,652,763	+		LRK54_RS11965	0.39	+2.1
2,652,763	+		LRK54_RS11965	0.39	-0.3
2,652,763	+		LRK54_RS11965	0.39	+0.7
2,652,763	+		LRK54_RS11965	0.39	+0.7
2,652,763	+		LRK54_RS11965	0.39	+0.7
2,652,763	+		LRK54_RS11965	0.39	+0.2
2,652,763	+		LRK54_RS11965	0.39	-1.3
2,652,763	+		LRK54_RS11965	0.39	+0.8
2,652,764	-		LRK54_RS11965	0.40	+0.7
2,652,764	-		LRK54_RS11965	0.40	+0.1
2,652,764	-		LRK54_RS11965	0.40	-0.1
2,652,764	-		LRK54_RS11965	0.40	+1.2
2,652,764	-		LRK54_RS11965	0.40	+0.2
2,652,764	-		LRK54_RS11965	0.40	+0.3
2,652,764	-		LRK54_RS11965	0.40	+0.5
2,652,764	-		LRK54_RS11965	0.40	+1.3
2,652,764	-		LRK54_RS11965	0.40	-0.1
2,652,764	-		LRK54_RS11965	0.40	+0.3
2,652,764	-		LRK54_RS11965	0.40	+0.4
2,652,764	-		LRK54_RS11965	0.40	-0.7
2,652,764	-		LRK54_RS11965	0.40	+0.6
2,652,764	-		LRK54_RS11965	0.40	-0.5
2,652,764	-		LRK54_RS11965	0.40	+0.2
2,652,764	-		LRK54_RS11965	0.40	+0.7
2,652,764	-		LRK54_RS11965	0.40	+0.7
2,652,764	-		LRK54_RS11965	0.40	+0.2
2,652,764	-		LRK54_RS11965	0.40	-0.1
2,652,771	+		LRK54_RS11965	0.41	+0.2
2,652,771	+		LRK54_RS11965	0.41	-0.1
2,652,771	+		LRK54_RS11965	0.41	+0.4
2,652,771	+		LRK54_RS11965	0.41	-2.3
2,652,771	+		LRK54_RS11965	0.41	+1.3
2,652,771	+		LRK54_RS11965	0.41	+0.4
2,652,772	-		LRK54_RS11965	0.42	-0.9
2,652,772	-		LRK54_RS11965	0.42	-0.9
2,652,772	-		LRK54_RS11965	0.42	+0.1
2,652,772	-		LRK54_RS11965	0.42	+0.9
2,652,772	-		LRK54_RS11965	0.42	+0.5
2,652,772	-		LRK54_RS11965	0.42	-0.1
2,652,772	-		LRK54_RS11965	0.42	+0.5
2,652,772	-		LRK54_RS11965	0.42	-0.5
2,652,772	-		LRK54_RS11965	0.42	+1.6
2,652,810	+		LRK54_RS11965	0.52	+0.2
2,652,810	+		LRK54_RS11965	0.52	+0.3
2,652,810	+		LRK54_RS11965	0.52	-0.5
2,652,811	-		LRK54_RS11965	0.52	+0.3
2,652,811	-		LRK54_RS11965	0.52	-0.5
2,652,811	-		LRK54_RS11965	0.52	-0.3
2,652,940	+		LRK54_RS11965	0.87	-0.5
2,652,941	-		LRK54_RS11965	0.88	+0.1
2,653,008	+				-1.4
2,653,008	+				-0.1
2,653,008	+				-0.5
2,653,008	+				+0.3
2,653,009	-				+0.3
2,653,009	-				-0.1
2,653,009	-				-0.3
2,653,009	-				-0.8
2,653,009	-				-0.9
2,653,149	+		LRK54_RS11970	0.11	-1.0
2,653,149	+		LRK54_RS11970	0.11	-0.4
2,653,149	+		LRK54_RS11970	0.11	-0.6
2,653,149	+		LRK54_RS11970	0.11	-0.5
2,653,149	+		LRK54_RS11970	0.11	-0.1
2,653,150	-		LRK54_RS11970	0.11	-1.2
2,653,150	-		LRK54_RS11970	0.11	-0.1
2,653,150	-		LRK54_RS11970	0.11	+0.2
2,653,150	-		LRK54_RS11970	0.11	-0.1
2,653,150	-		LRK54_RS11970	0.11	-0.3
2,653,150	-		LRK54_RS11970	0.11	+0.7
2,653,227	+		LRK54_RS11970	0.17	-1.4
2,653,227	+		LRK54_RS11970	0.17	-0.2
2,653,227	+		LRK54_RS11970	0.17	-1.1
2,653,227	+		LRK54_RS11970	0.17	-0.8
2,653,227	+		LRK54_RS11970	0.17	+0.1
2,653,227	+		LRK54_RS11970	0.17	-1.5
2,653,227	+		LRK54_RS11970	0.17	-1.5
2,653,227	+		LRK54_RS11970	0.17	-1.7
2,653,227	+		LRK54_RS11970	0.17	-0.3
2,653,227	+		LRK54_RS11970	0.17	+0.5
2,653,227	+		LRK54_RS11970	0.17	+0.9
2,653,227	+		LRK54_RS11970	0.17	+0.2
2,653,227	+		LRK54_RS11970	0.17	-1.1
2,653,227	+		LRK54_RS11970	0.17	-1.1
2,653,227	+		LRK54_RS11970	0.17	+1.0
2,653,227	+		LRK54_RS11970	0.17	-0.9
2,653,227	+		LRK54_RS11970	0.17	+0.7
2,653,228	-		LRK54_RS11970	0.17	-0.1
2,653,228	-		LRK54_RS11970	0.17	-0.5
2,653,228	-		LRK54_RS11970	0.17	+0.2
2,653,228	-		LRK54_RS11970	0.17	-0.9
2,653,228	-		LRK54_RS11970	0.17	-0.8
2,653,228	-		LRK54_RS11970	0.17	-0.2
2,653,228	-		LRK54_RS11970	0.17	-0.3
2,653,228	-		LRK54_RS11970	0.17	+0.3
2,653,228	-		LRK54_RS11970	0.17	-0.9
2,653,228	-		LRK54_RS11970	0.17	-1.1
2,653,228	-		LRK54_RS11970	0.17	+0.3
2,653,228	-		LRK54_RS11970	0.17	-0.3
2,653,228	-		LRK54_RS11970	0.17	-1.7
2,653,228	-		LRK54_RS11970	0.17	-0.3
2,653,228	-		LRK54_RS11970	0.17	+1.3
2,653,228	-		LRK54_RS11970	0.17	+0.2
2,653,228	-		LRK54_RS11970	0.17	+0.0
2,653,228	-		LRK54_RS11970	0.17	-0.5
2,653,228	-		LRK54_RS11970	0.17	+0.3
2,653,285	+		LRK54_RS11970	0.22	-0.4
2,653,285	+		LRK54_RS11970	0.22	-0.9
2,653,286	-		LRK54_RS11970	0.22	-0.7
2,653,452	+		LRK54_RS11970	0.35	+0.2
2,653,452	+		LRK54_RS11970	0.35	-0.4
2,653,453	-		LRK54_RS11970	0.35	-0.1
2,653,453	-		LRK54_RS11970	0.35	-0.3
2,653,453	-		LRK54_RS11970	0.35	+0.7
2,653,453	-		LRK54_RS11970	0.35	+0.5
2,653,482	+		LRK54_RS11970	0.37	-2.1
2,653,482	+		LRK54_RS11970	0.37	-0.2
2,653,482	+		LRK54_RS11970	0.37	+0.0
2,653,482	+		LRK54_RS11970	0.37	-0.8
2,653,482	+		LRK54_RS11970	0.37	-2.4
2,653,482	+		LRK54_RS11970	0.37	-1.3
2,653,482	+		LRK54_RS11970	0.37	-0.5
2,653,482	+		LRK54_RS11970	0.37	-1.6
2,653,482	+		LRK54_RS11970	0.37	-0.3
2,653,482	+		LRK54_RS11970	0.37	-0.8
2,653,482	+		LRK54_RS11970	0.37	+0.9
2,653,482	+		LRK54_RS11970	0.37	-0.0
2,653,482	+		LRK54_RS11970	0.37	-2.1
2,653,482	+		LRK54_RS11970	0.37	-1.4
2,653,482	+		LRK54_RS11970	0.37	+0.7
2,653,482	+		LRK54_RS11970	0.37	+0.9
2,653,482	+		LRK54_RS11970	0.37	-0.9
2,653,482	+		LRK54_RS11970	0.37	-0.9
2,653,482	+		LRK54_RS11970	0.37	+0.4
2,653,482	+		LRK54_RS11970	0.37	-0.5
2,653,482	+		LRK54_RS11970	0.37	-1.3
2,653,482	+		LRK54_RS11970	0.37	-1.3
2,653,482	+		LRK54_RS11970	0.37	-0.4
2,653,482	+		LRK54_RS11970	0.37	-1.0
2,653,482	+		LRK54_RS11970	0.37	-0.2
2,653,482	+		LRK54_RS11970	0.37	-0.5
2,653,482	+		LRK54_RS11970	0.37	+0.5
2,653,482	+		LRK54_RS11970	0.37	-0.2
2,653,482	+		LRK54_RS11970	0.37	-0.5
2,653,483	-		LRK54_RS11970	0.38	+0.0
2,653,483	-		LRK54_RS11970	0.38	-0.8
2,653,483	-		LRK54_RS11970	0.38	-0.2
2,653,483	-		LRK54_RS11970	0.38	-0.9
2,653,483	-		LRK54_RS11970	0.38	+0.4
2,653,483	-		LRK54_RS11970	0.38	-1.5
2,653,483	-		LRK54_RS11970	0.38	-0.3
2,653,483	-		LRK54_RS11970	0.38	-0.3
2,653,483	-		LRK54_RS11970	0.38	-0.2
2,653,483	-		LRK54_RS11970	0.38	-0.6
2,653,483	-		LRK54_RS11970	0.38	-1.0
2,653,483	-		LRK54_RS11970	0.38	-0.6
2,653,483	-		LRK54_RS11970	0.38	+0.6
2,653,483	-		LRK54_RS11970	0.38	-1.4
2,653,485	+		LRK54_RS11970	0.38	-1.0
2,653,485	+		LRK54_RS11970	0.38	+1.3
2,653,485	+		LRK54_RS11970	0.38	-0.4
2,653,485	+		LRK54_RS11970	0.38	-0.8
2,653,485	+		LRK54_RS11970	0.38	-0.7
2,653,485	+		LRK54_RS11970	0.38	+0.2
2,653,486	-		LRK54_RS11970	0.38	-0.9
2,653,486	-		LRK54_RS11970	0.38	-0.3
2,653,486	-		LRK54_RS11970	0.38	-0.1
2,653,486	-		LRK54_RS11970	0.38	-0.5
2,653,486	-		LRK54_RS11970	0.38	+0.0
2,653,486	-		LRK54_RS11970	0.38	-0.1
2,653,486	-		LRK54_RS11970	0.38	-0.2
2,653,486	-		LRK54_RS11970	0.38	-1.8
2,653,486	-		LRK54_RS11970	0.38	-0.6
2,653,486	-		LRK54_RS11970	0.38	-0.2
2,653,486	-		LRK54_RS11970	0.38	+0.6
2,653,486	-		LRK54_RS11970	0.38	-1.5
2,653,725	+		LRK54_RS11970	0.57	-1.5
2,653,726	-		LRK54_RS11970	0.57	-0.3
2,653,932	+		LRK54_RS11970	0.73	-0.5
2,653,932	+		LRK54_RS11970	0.73	+0.0
2,653,932	+		LRK54_RS11970	0.73	-0.7
2,653,932	+		LRK54_RS11970	0.73	-1.0
2,653,932	+		LRK54_RS11970	0.73	-0.3
2,653,932	+		LRK54_RS11970	0.73	+1.1
2,653,932	+		LRK54_RS11970	0.73	-1.2
2,653,932	+		LRK54_RS11970	0.73	-0.3
2,653,932	+		LRK54_RS11970	0.73	-0.7
2,653,932	+		LRK54_RS11970	0.73	-3.0
2,653,932	+		LRK54_RS11970	0.73	-1.1
2,653,933	-		LRK54_RS11970	0.73	-1.3
2,653,933	-		LRK54_RS11970	0.73	-0.8
2,653,933	-		LRK54_RS11970	0.73	-0.1
2,653,933	-		LRK54_RS11970	0.73	+0.2
2,653,933	-		LRK54_RS11970	0.73	-0.9
2,653,933	-		LRK54_RS11970	0.73	-1.0
2,653,933	-		LRK54_RS11970	0.73	-0.3
2,653,933	-		LRK54_RS11970	0.73	-0.1
2,653,933	-		LRK54_RS11970	0.73	-1.2
2,653,933	-		LRK54_RS11970	0.73	-1.9
2,653,933	-		LRK54_RS11970	0.73	-0.6
2,653,933	-		LRK54_RS11970	0.73	+0.3
2,653,933	-		LRK54_RS11970	0.73	+0.4
2,653,933	-		LRK54_RS11970	0.73	-0.5
2,653,933	-		LRK54_RS11970	0.73	-0.3