Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11875

Experiment: R2A control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A control
2,630,969	-		LRK54_RS11870	0.10	+0.8
2,631,033	+		LRK54_RS11870	0.22	+0.1
2,631,033	+		LRK54_RS11870	0.22	+0.1
2,631,033	+		LRK54_RS11870	0.22	-1.4
2,631,033	+		LRK54_RS11870	0.22	-0.1
2,631,033	+		LRK54_RS11870	0.22	-0.1
2,631,033	+		LRK54_RS11870	0.22	+0.5
2,631,033	+		LRK54_RS11870	0.22	+2.0
2,631,033	+		LRK54_RS11870	0.22	-0.6
2,631,033	+		LRK54_RS11870	0.22	-0.1
2,631,034	-		LRK54_RS11870	0.23	+0.6
2,631,034	-		LRK54_RS11870	0.23	+1.4
2,631,034	-		LRK54_RS11870	0.23	-0.6
2,631,034	-		LRK54_RS11870	0.23	-0.7
2,631,034	-		LRK54_RS11870	0.23	+0.7
2,631,034	-		LRK54_RS11870	0.23	+0.5
2,631,034	-		LRK54_RS11870	0.23	+1.2
2,631,034	-		LRK54_RS11870	0.23	+0.1
2,631,034	-		LRK54_RS11870	0.23	-0.2
2,631,034	-		LRK54_RS11870	0.23	-0.3
2,631,034	-		LRK54_RS11870	0.23	-1.0
2,631,034	-		LRK54_RS11870	0.23	-0.2
2,631,034	-		LRK54_RS11870	0.23	+0.3
2,631,034	-		LRK54_RS11870	0.23	+1.1
2,631,034	-		LRK54_RS11870	0.23	+0.2
2,631,323	+		LRK54_RS11870	0.77	+1.0
2,631,323	+		LRK54_RS11870	0.77	+0.7
2,631,323	+		LRK54_RS11870	0.77	+0.5
2,631,323	+		LRK54_RS11870	0.77	+0.5
2,631,323	+		LRK54_RS11870	0.77	+0.6
2,631,323	+		LRK54_RS11870	0.77	-0.6
2,631,323	+		LRK54_RS11870	0.77	+0.4
2,631,323	+		LRK54_RS11870	0.77	+0.9
2,631,323	+		LRK54_RS11870	0.77	-0.7
2,631,323	+		LRK54_RS11870	0.77	+0.2
2,631,323	+		LRK54_RS11870	0.77	+0.4
2,631,323	+		LRK54_RS11870	0.77	+1.1
2,631,323	+		LRK54_RS11870	0.77	+0.0
2,631,323	+		LRK54_RS11870	0.77	+1.9
2,631,323	+		LRK54_RS11870	0.77	+0.2
2,631,323	+		LRK54_RS11870	0.77	+0.6
2,631,324	-		LRK54_RS11870	0.77	+0.6
2,631,324	-		LRK54_RS11870	0.77	+0.8
2,631,324	-		LRK54_RS11870	0.77	-0.5
2,631,324	-		LRK54_RS11870	0.77	-0.1
2,631,324	-		LRK54_RS11870	0.77	-1.1
2,631,324	-		LRK54_RS11870	0.77	-0.6
2,631,324	-		LRK54_RS11870	0.77	-1.6
2,631,324	-		LRK54_RS11870	0.77	+1.5
2,631,324	-		LRK54_RS11870	0.77	-0.4
2,631,324	-		LRK54_RS11870	0.77	+0.4
2,631,324	-		LRK54_RS11870	0.77	-0.2
2,631,324	-		LRK54_RS11870	0.77	+0.4
2,631,324	-		LRK54_RS11870	0.77	+1.7
2,631,324	-		LRK54_RS11870	0.77	-0.1
2,631,324	-		LRK54_RS11870	0.77	+0.8
2,631,324	-		LRK54_RS11870	0.77	-0.6
2,631,324	-		LRK54_RS11870	0.77	-0.3
2,631,324	-		LRK54_RS11870	0.77	+0.2
2,631,324	-		LRK54_RS11870	0.77	+0.2
2,631,324	-		LRK54_RS11870	0.77	+0.6
2,631,876	+		LRK54_RS11875	0.45	+1.5
2,631,876	+		LRK54_RS11875	0.45	+1.3
2,631,876	+		LRK54_RS11875	0.45	-0.3
2,631,876	+		LRK54_RS11875	0.45	+0.5
2,631,876	+		LRK54_RS11875	0.45	+0.6
2,631,876	+		LRK54_RS11875	0.45	-0.6
2,631,876	+		LRK54_RS11875	0.45	+0.2
2,631,876	+		LRK54_RS11875	0.45	+1.1
2,631,876	+		LRK54_RS11875	0.45	+0.1
2,631,876	+		LRK54_RS11875	0.45	+0.8
2,631,876	+		LRK54_RS11875	0.45	+0.5
2,631,876	+		LRK54_RS11875	0.45	-0.8
2,631,877	-		LRK54_RS11875	0.45	+0.2
2,631,877	-		LRK54_RS11875	0.45	+0.8
2,631,877	-		LRK54_RS11875	0.45	-0.1
2,631,877	-		LRK54_RS11875	0.45	+0.2
2,631,877	-		LRK54_RS11875	0.45	-0.2
2,631,877	-		LRK54_RS11875	0.45	-0.0
2,631,877	-		LRK54_RS11875	0.45	-0.1
2,631,877	-		LRK54_RS11875	0.45	+0.2
2,631,877	-		LRK54_RS11875	0.45	-0.3
2,631,877	-		LRK54_RS11875	0.45	+0.3
2,631,877	-		LRK54_RS11875	0.45	+0.1
2,632,098	+		LRK54_RS11875	0.67	+0.7
2,632,098	+		LRK54_RS11875	0.67	+0.6
2,632,098	+		LRK54_RS11875	0.67	-0.1
2,632,098	+		LRK54_RS11875	0.67	+0.8
2,632,098	+		LRK54_RS11875	0.67	+0.2
2,632,098	+		LRK54_RS11875	0.67	+1.1
2,632,098	+		LRK54_RS11875	0.67	+0.2
2,632,098	+		LRK54_RS11875	0.67	+0.1
2,632,098	+		LRK54_RS11875	0.67	+0.8
2,632,098	+		LRK54_RS11875	0.67	+0.5
2,632,098	+		LRK54_RS11875	0.67	+0.1
2,632,098	+		LRK54_RS11875	0.67	+0.8
2,632,098	+		LRK54_RS11875	0.67	+0.7
2,632,098	+		LRK54_RS11875	0.67	-0.6
2,632,098	+		LRK54_RS11875	0.67	+0.9
2,632,098	+		LRK54_RS11875	0.67	-0.6
2,632,098	+		LRK54_RS11875	0.67	+0.4
2,632,098	+		LRK54_RS11875	0.67	+0.2
2,632,098	+		LRK54_RS11875	0.67	-0.8
2,632,098	+		LRK54_RS11875	0.67	-0.8
2,632,098	+		LRK54_RS11875	0.67	-0.0
2,632,098	+		LRK54_RS11875	0.67	+0.5
2,632,099	-		LRK54_RS11875	0.67	-0.2
2,632,099	-		LRK54_RS11875	0.67	-0.1
2,632,099	-		LRK54_RS11875	0.67	+0.8
2,632,099	-		LRK54_RS11875	0.67	-1.3
2,632,099	-		LRK54_RS11875	0.67	-1.5
2,632,099	-		LRK54_RS11875	0.67	-0.5
2,632,099	-		LRK54_RS11875	0.67	-0.2
2,632,099	-		LRK54_RS11875	0.67	+0.1
2,632,099	-		LRK54_RS11875	0.67	+0.7
2,632,099	-		LRK54_RS11875	0.67	+0.7
2,632,099	-		LRK54_RS11875	0.67	+0.1
2,632,099	-		LRK54_RS11875	0.67	+0.4
2,632,099	-		LRK54_RS11875	0.67	+0.2
2,632,099	-		LRK54_RS11875	0.67	+0.6
2,632,099	-		LRK54_RS11875	0.67	+1.2
2,632,099	-		LRK54_RS11875	0.67	+0.5
2,632,099	-		LRK54_RS11875	0.67	-0.1
2,632,099	-		LRK54_RS11875	0.67	-0.4
2,632,099	-		LRK54_RS11875	0.67	+0.9
2,632,099	-		LRK54_RS11875	0.67	+0.5
2,632,099	-		LRK54_RS11875	0.67	+0.5
2,632,099	-		LRK54_RS11875	0.67	+0.1
2,632,099	-		LRK54_RS11875	0.67	-0.7
2,632,099	-		LRK54_RS11875	0.67	+1.1
2,632,099	-		LRK54_RS11875	0.67	-0.4
2,632,099	-		LRK54_RS11875	0.67	+0.5
2,632,099	-		LRK54_RS11875	0.67	+0.2
2,632,099	-		LRK54_RS11875	0.67	-0.3
2,632,263	+		LRK54_RS11875	0.84	+0.8
2,632,263	+		LRK54_RS11875	0.84	+0.2
2,632,264	-		LRK54_RS11875	0.84	+0.0
2,632,685	+		LRK54_RS11880	0.14	-0.6
2,632,685	+		LRK54_RS11880	0.14	+1.1
2,632,685	+		LRK54_RS11880	0.14	+0.0
2,632,685	+		LRK54_RS11880	0.14	+0.6
2,632,685	+		LRK54_RS11880	0.14	+0.2
2,632,685	+		LRK54_RS11880	0.14	-1.7
2,632,685	+		LRK54_RS11880	0.14	+0.3
2,632,686	-		LRK54_RS11880	0.14	+0.3
2,632,686	-		LRK54_RS11880	0.14	+0.4
2,632,686	-		LRK54_RS11880	0.14	-0.2
2,632,686	-		LRK54_RS11880	0.14	+1.0
2,632,686	-		LRK54_RS11880	0.14	+0.6
2,632,778	+		LRK54_RS11880	0.19	+0.3
2,632,778	+		LRK54_RS11880	0.19	+1.1
2,632,778	+		LRK54_RS11880	0.19	-0.7
2,632,778	+		LRK54_RS11880	0.19	+0.6
2,632,778	+		LRK54_RS11880	0.19	-0.3
2,632,779	-		LRK54_RS11880	0.19	-0.0
2,632,779	-		LRK54_RS11880	0.19	-1.2
2,632,779	-		LRK54_RS11880	0.19	-0.1
2,632,779	-		LRK54_RS11880	0.19	+1.0
2,632,779	-		LRK54_RS11880	0.19	+0.0
2,632,779	-		LRK54_RS11880	0.19	+0.1
2,632,779	-		LRK54_RS11880	0.19	+0.1
2,632,836	-		LRK54_RS11880	0.22	+0.3
2,633,097	+		LRK54_RS11880	0.36	+0.2
2,633,097	+		LRK54_RS11880	0.36	+1.3
2,633,097	+		LRK54_RS11880	0.36	-0.1
2,633,097	+		LRK54_RS11880	0.36	+0.7
2,633,097	+		LRK54_RS11880	0.36	+0.8
2,633,097	+		LRK54_RS11880	0.36	+1.1
2,633,097	+		LRK54_RS11880	0.36	+0.8
2,633,097	+		LRK54_RS11880	0.36	-0.2
2,633,097	+		LRK54_RS11880	0.36	+0.6
2,633,098	-		LRK54_RS11880	0.36	-0.1
2,633,098	-		LRK54_RS11880	0.36	+0.3
2,633,098	-		LRK54_RS11880	0.36	-0.1
2,633,098	-		LRK54_RS11880	0.36	+0.3
2,633,098	-		LRK54_RS11880	0.36	-2.0
2,633,098	-		LRK54_RS11880	0.36	+0.5
2,633,098	-		LRK54_RS11880	0.36	-0.1
2,633,098	-		LRK54_RS11880	0.36	+0.4
2,633,098	-		LRK54_RS11880	0.36	+0.1
2,633,098	-		LRK54_RS11880	0.36	-0.0
2,633,101	+		LRK54_RS11880	0.36	+0.5
2,633,101	+		LRK54_RS11880	0.36	+0.4
2,633,101	+		LRK54_RS11880	0.36	-0.0
2,633,101	+		LRK54_RS11880	0.36	-0.1
2,633,101	+		LRK54_RS11880	0.36	+0.2
2,633,102	-		LRK54_RS11880	0.36	-0.7
2,633,102	-		LRK54_RS11880	0.36	+0.6
2,633,102	-		LRK54_RS11880	0.36	-0.2
2,633,102	-		LRK54_RS11880	0.36	+0.3
2,633,102	-		LRK54_RS11880	0.36	-0.4
2,633,102	-		LRK54_RS11880	0.36	-0.4
2,633,102	-		LRK54_RS11880	0.36	+0.0
2,633,102	-		LRK54_RS11880	0.36	-1.6
2,633,102	-		LRK54_RS11880	0.36	+0.2
2,633,102	-		LRK54_RS11880	0.36	+0.3
2,633,228	+		LRK54_RS11880	0.43	+0.3
2,633,228	+		LRK54_RS11880	0.43	+0.4
2,633,228	+		LRK54_RS11880	0.43	+0.5
2,633,228	+		LRK54_RS11880	0.43	+0.6
2,633,228	+		LRK54_RS11880	0.43	+1.6
2,633,228	+		LRK54_RS11880	0.43	+0.9
2,633,228	+		LRK54_RS11880	0.43	+0.0
2,633,228	+		LRK54_RS11880	0.43	+0.7
2,633,229	-		LRK54_RS11880	0.43	+0.3
2,633,229	-		LRK54_RS11880	0.43	+0.2
2,633,229	-		LRK54_RS11880	0.43	+0.4
2,633,229	-		LRK54_RS11880	0.43	+0.3
2,633,229	-		LRK54_RS11880	0.43	+1.3
2,633,229	-		LRK54_RS11880	0.43	-1.2
2,633,229	-		LRK54_RS11880	0.43	+0.5
2,633,229	-		LRK54_RS11880	0.43	-0.2
2,633,229	-		LRK54_RS11880	0.43	-1.3
2,633,421	+		LRK54_RS11880	0.53	-0.0
2,633,421	+		LRK54_RS11880	0.53	+0.0
2,633,421	+		LRK54_RS11880	0.53	+0.8
2,633,421	+		LRK54_RS11880	0.53	+2.1
2,633,421	+		LRK54_RS11880	0.53	+0.4
2,633,421	+		LRK54_RS11880	0.53	+1.2
2,633,421	+		LRK54_RS11880	0.53	+0.8
2,633,421	+		LRK54_RS11880	0.53	-0.2