Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10790

Experiment: R2A control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A control
2,386,405	+		LRK54_RS10785	0.11	-0.6
2,386,405	+		LRK54_RS10785	0.11	-0.2
2,386,405	+		LRK54_RS10785	0.11	-0.4
2,386,405	+		LRK54_RS10785	0.11	-0.3
2,386,405	+		LRK54_RS10785	0.11	-0.8
2,386,405	+		LRK54_RS10785	0.11	-0.1
2,386,405	+		LRK54_RS10785	0.11	-1.3
2,386,405	+		LRK54_RS10785	0.11	+0.0
2,386,405	+		LRK54_RS10785	0.11	-0.4
2,386,405	+		LRK54_RS10785	0.11	-0.1
2,386,405	+		LRK54_RS10785	0.11	+0.3
2,386,405	+		LRK54_RS10785	0.11	-0.2
2,386,405	+		LRK54_RS10785	0.11	+1.6
2,386,405	+		LRK54_RS10785	0.11	+0.1
2,386,405	+		LRK54_RS10785	0.11	+0.4
2,386,405	+		LRK54_RS10785	0.11	-0.1
2,386,406	-		LRK54_RS10785	0.11	-1.4
2,386,406	-		LRK54_RS10785	0.11	-1.3
2,386,406	-		LRK54_RS10785	0.11	+0.2
2,386,406	-		LRK54_RS10785	0.11	-1.9
2,386,406	-		LRK54_RS10785	0.11	-0.3
2,386,406	-		LRK54_RS10785	0.11	+0.7
2,386,406	-		LRK54_RS10785	0.11	-0.6
2,386,406	-		LRK54_RS10785	0.11	+0.4
2,386,406	-		LRK54_RS10785	0.11	-0.2
2,386,406	-		LRK54_RS10785	0.11	+0.1
2,386,406	-		LRK54_RS10785	0.11	-0.1
2,386,406	-		LRK54_RS10785	0.11	-1.3
2,386,406	-		LRK54_RS10785	0.11	+0.5
2,386,406	-		LRK54_RS10785	0.11	-0.4
2,386,406	-		LRK54_RS10785	0.11	-0.4
2,386,406	-		LRK54_RS10785	0.11	+0.3
2,386,406	-		LRK54_RS10785	0.11	-0.0
2,386,406	-		LRK54_RS10785	0.11	-0.1
2,386,406	-		LRK54_RS10785	0.11	-0.4
2,386,406	-		LRK54_RS10785	0.11	-0.9
2,386,406	-		LRK54_RS10785	0.11	-0.4
2,386,406	-		LRK54_RS10785	0.11	+0.1
2,386,406	-		LRK54_RS10785	0.11	+0.0
2,386,406	-		LRK54_RS10785	0.11	-0.9
2,386,406	-		LRK54_RS10785	0.11	-0.7
2,386,406	-		LRK54_RS10785	0.11	+1.1
2,386,406	-		LRK54_RS10785	0.11	+0.5
2,386,406	-		LRK54_RS10785	0.11	-2.0
2,386,406	-		LRK54_RS10785	0.11	-0.7
2,386,406	-		LRK54_RS10785	0.11	+0.5
2,386,453	+		LRK54_RS10785	0.16	-0.5
2,386,453	+		LRK54_RS10785	0.16	+0.6
2,386,453	+		LRK54_RS10785	0.16	-0.1
2,386,453	+		LRK54_RS10785	0.16	+0.2
2,386,453	+		LRK54_RS10785	0.16	+0.8
2,386,453	+		LRK54_RS10785	0.16	-0.0
2,386,453	+		LRK54_RS10785	0.16	-0.8
2,386,453	+		LRK54_RS10785	0.16	-0.1
2,386,453	+		LRK54_RS10785	0.16	-0.1
2,386,453	+		LRK54_RS10785	0.16	-1.6
2,386,453	+		LRK54_RS10785	0.16	+0.3
2,386,453	+		LRK54_RS10785	0.16	-2.7
2,386,453	+		LRK54_RS10785	0.16	+0.2
2,386,453	+		LRK54_RS10785	0.16	+1.1
2,386,453	+		LRK54_RS10785	0.16	-0.5
2,386,453	+		LRK54_RS10785	0.16	-1.0
2,386,453	+		LRK54_RS10785	0.16	+0.3
2,386,453	+		LRK54_RS10785	0.16	+0.2
2,386,453	+		LRK54_RS10785	0.16	-0.5
2,386,453	+		LRK54_RS10785	0.16	+0.3
2,386,453	+		LRK54_RS10785	0.16	+0.1
2,386,453	+		LRK54_RS10785	0.16	+0.4
2,386,454	-		LRK54_RS10785	0.16	+0.2
2,386,454	-		LRK54_RS10785	0.16	-0.4
2,386,454	-		LRK54_RS10785	0.16	-0.4
2,386,454	-		LRK54_RS10785	0.16	-0.3
2,386,454	-		LRK54_RS10785	0.16	-0.4
2,386,454	-		LRK54_RS10785	0.16	-1.0
2,386,454	-		LRK54_RS10785	0.16	-0.3
2,386,454	-		LRK54_RS10785	0.16	-0.0
2,386,454	-		LRK54_RS10785	0.16	-0.1
2,386,454	-		LRK54_RS10785	0.16	-0.7
2,386,454	-		LRK54_RS10785	0.16	+0.2
2,386,454	-		LRK54_RS10785	0.16	-0.2
2,386,454	-		LRK54_RS10785	0.16	-0.3
2,386,546	+		LRK54_RS10785	0.26	+0.2
2,386,546	+		LRK54_RS10785	0.26	+0.1
2,386,546	+		LRK54_RS10785	0.26	+0.4
2,386,547	-		LRK54_RS10785	0.26	+0.3
2,386,547	-		LRK54_RS10785	0.26	+0.6
2,386,547	-		LRK54_RS10785	0.26	-1.5
2,386,547	-		LRK54_RS10785	0.26	-0.1
2,386,547	-		LRK54_RS10785	0.26	-0.8
2,386,547	-		LRK54_RS10785	0.26	-0.3
2,386,547	-		LRK54_RS10785	0.26	-0.3
2,386,717	+		LRK54_RS10785	0.45	+0.2
2,386,717	+		LRK54_RS10785	0.45	-0.3
2,386,717	+		LRK54_RS10785	0.45	-0.4
2,386,717	+		LRK54_RS10785	0.45	-1.6
2,386,717	+		LRK54_RS10785	0.45	-0.4
2,386,717	+		LRK54_RS10785	0.45	-1.1
2,386,717	+		LRK54_RS10785	0.45	+0.1
2,386,717	+		LRK54_RS10785	0.45	-1.1
2,386,717	+		LRK54_RS10785	0.45	-2.0
2,386,717	+		LRK54_RS10785	0.45	-0.3
2,386,717	+		LRK54_RS10785	0.45	-0.5
2,386,717	+		LRK54_RS10785	0.45	-0.9
2,386,717	+		LRK54_RS10785	0.45	-0.2
2,386,717	+		LRK54_RS10785	0.45	+0.4
2,386,717	+		LRK54_RS10785	0.45	-1.0
2,386,717	+		LRK54_RS10785	0.45	+0.2
2,386,717	+		LRK54_RS10785	0.45	+0.7
2,386,717	+		LRK54_RS10785	0.45	-0.8
2,386,717	+		LRK54_RS10785	0.45	+0.3
2,386,717	+		LRK54_RS10785	0.45	+1.2
2,386,717	+		LRK54_RS10785	0.45	+0.4
2,386,717	+		LRK54_RS10785	0.45	-0.2
2,386,717	+		LRK54_RS10785	0.45	+0.0
2,386,717	+		LRK54_RS10785	0.45	-0.3
2,386,717	+		LRK54_RS10785	0.45	+0.5
2,386,717	+		LRK54_RS10785	0.45	-0.1
2,386,717	+		LRK54_RS10785	0.45	-1.1
2,386,717	+		LRK54_RS10785	0.45	-1.1
2,386,717	+		LRK54_RS10785	0.45	+0.0
2,386,718	-		LRK54_RS10785	0.46	-0.1
2,386,718	-		LRK54_RS10785	0.46	-0.5
2,386,718	-		LRK54_RS10785	0.46	+0.1
2,386,718	-		LRK54_RS10785	0.46	+0.6
2,386,718	-		LRK54_RS10785	0.46	+1.1
2,386,718	-		LRK54_RS10785	0.46	-0.3
2,386,718	-		LRK54_RS10785	0.46	-0.5
2,386,718	-		LRK54_RS10785	0.46	+0.2
2,386,718	-		LRK54_RS10785	0.46	+0.5
2,386,718	-		LRK54_RS10785	0.46	+0.5
2,386,718	-		LRK54_RS10785	0.46	-0.2
2,386,718	-		LRK54_RS10785	0.46	-0.3
2,386,718	-		LRK54_RS10785	0.46	+0.7
2,386,718	-		LRK54_RS10785	0.46	-0.8
2,386,718	-		LRK54_RS10785	0.46	+0.1
2,386,718	-		LRK54_RS10785	0.46	+0.2
2,386,718	-		LRK54_RS10785	0.46	-0.7
2,386,718	-		LRK54_RS10785	0.46	+1.5
2,386,718	-		LRK54_RS10785	0.46	-0.5
2,386,718	-		LRK54_RS10785	0.46	+0.9
2,386,718	-		LRK54_RS10785	0.46	-0.8
2,386,825	+		LRK54_RS10785	0.57	+0.3
2,386,825	+		LRK54_RS10785	0.57	-0.4
2,386,825	+		LRK54_RS10785	0.57	-0.6
2,386,825	+		LRK54_RS10785	0.57	-0.6
2,386,825	+		LRK54_RS10785	0.57	-0.0
2,386,825	+		LRK54_RS10785	0.57	+0.3
2,386,826	-		LRK54_RS10785	0.58	-0.7
2,386,826	-		LRK54_RS10785	0.58	-0.2
2,386,826	-		LRK54_RS10785	0.58	+0.2
2,386,826	-		LRK54_RS10785	0.58	+0.3
2,386,826	-		LRK54_RS10785	0.58	-0.5
2,386,826	-		LRK54_RS10785	0.58	-0.5
2,386,826	-		LRK54_RS10785	0.58	-0.0
2,386,826	-		LRK54_RS10785	0.58	+0.0
2,386,826	-		LRK54_RS10785	0.58	+0.2
2,386,858	+		LRK54_RS10785	0.61	-0.2
2,386,858	+		LRK54_RS10785	0.61	-0.1
2,386,858	+		LRK54_RS10785	0.61	-0.1
2,386,859	-		LRK54_RS10785	0.61	-0.0
2,387,005	+		LRK54_RS10785	0.78	-3.2
2,387,005	+		LRK54_RS10785	0.78	-0.4
2,387,005	+		LRK54_RS10785	0.78	-0.0
2,387,006	-		LRK54_RS10785	0.78	-0.0
2,387,006	-		LRK54_RS10785	0.78	-1.4
2,387,006	-		LRK54_RS10785	0.78	+1.4
2,387,006	-		LRK54_RS10785	0.78	-0.3
2,387,017	+		LRK54_RS10785	0.79	+0.3
2,387,017	+		LRK54_RS10785	0.79	-0.5
2,387,017	+		LRK54_RS10785	0.79	-0.2
2,387,017	+		LRK54_RS10785	0.79	-0.4
2,387,017	+		LRK54_RS10785	0.79	-0.4
2,387,017	+		LRK54_RS10785	0.79	-0.1
2,387,017	+		LRK54_RS10785	0.79	+0.0
2,387,017	+		LRK54_RS10785	0.79	-0.2
2,387,017	+		LRK54_RS10785	0.79	+1.2
2,387,017	+		LRK54_RS10785	0.79	+0.2
2,387,017	+		LRK54_RS10785	0.79	+1.1
2,387,017	+		LRK54_RS10785	0.79	+0.3
2,387,017	+		LRK54_RS10785	0.79	+0.2
2,387,017	+		LRK54_RS10785	0.79	+0.2
2,387,017	+		LRK54_RS10785	0.79	+0.1
2,387,017	+		LRK54_RS10785	0.79	+0.5
2,387,018	-		LRK54_RS10785	0.79	-0.4
2,387,018	-		LRK54_RS10785	0.79	+0.6
2,387,018	-		LRK54_RS10785	0.79	+1.0
2,387,018	-		LRK54_RS10785	0.79	-0.1
2,387,018	-		LRK54_RS10785	0.79	+0.1
2,387,018	-		LRK54_RS10785	0.79	-0.2
2,387,018	-		LRK54_RS10785	0.79	+0.5
2,387,018	-		LRK54_RS10785	0.79	-0.0
2,387,018	-		LRK54_RS10785	0.79	-0.7
2,387,018	-		LRK54_RS10785	0.79	-0.1
2,387,018	-		LRK54_RS10785	0.79	-0.4
2,387,018	-		LRK54_RS10785	0.79	+0.4
2,387,018	-		LRK54_RS10785	0.79	-0.7
2,387,018	-		LRK54_RS10785	0.79	-0.4
2,387,018	-		LRK54_RS10785	0.79	-0.3
2,387,018	-		LRK54_RS10785	0.79	-0.7
2,387,018	-		LRK54_RS10785	0.79	+0.7
2,387,243	+				-0.7
2,387,252	+				-0.2
2,387,252	+				-0.3
2,387,252	+				+0.9
2,387,252	+				-0.9
2,387,252	+				-0.1
2,387,252	+				-0.3
2,387,253	-				+0.3
2,387,253	-				+1.2
2,387,253	-				-0.9
2,387,382	+				+0.5
2,387,391	+				+0.5
2,387,391	+				-0.2
2,387,391	+				-0.0
2,387,391	+				+0.6
2,387,391	+				+0.1
2,387,391	+				+1.0
2,387,391	+				-0.0
2,387,391	+				+0.6
2,387,391	+				+0.6
2,387,392	-				-0.2
2,387,392	-				+0.8
2,387,392	-				+0.9
2,387,392	-				-0.8
2,387,392	-				+1.0
2,387,392	-				+1.4
2,387,392	-				+0.4
2,387,392	-				+0.5
2,387,392	-				+0.5
2,387,533	+		LRK54_RS10790	0.19	-0.3
2,387,534	-		LRK54_RS10790	0.19	-0.3
2,387,942	+		LRK54_RS10790	0.59	-1.1
2,387,942	+		LRK54_RS10790	0.59	+0.4
2,387,942	+		LRK54_RS10790	0.59	+0.6
2,387,942	+		LRK54_RS10790	0.59	+1.0
2,387,942	+		LRK54_RS10790	0.59	+0.9
2,387,942	+		LRK54_RS10790	0.59	+0.1
2,387,942	+		LRK54_RS10790	0.59	-0.9
2,387,942	+		LRK54_RS10790	0.59	+1.1
2,387,943	-		LRK54_RS10790	0.59	+1.1
2,387,943	-		LRK54_RS10790	0.59	-1.0
2,387,943	-		LRK54_RS10790	0.59	+1.2
2,387,943	-		LRK54_RS10790	0.59	+0.3
2,387,943	-		LRK54_RS10790	0.59	+0.4
2,387,943	-		LRK54_RS10790	0.59	+1.1
2,387,943	-		LRK54_RS10790	0.59	+0.5
2,387,943	-		LRK54_RS10790	0.59	+1.1
2,387,943	-		LRK54_RS10790	0.59	+0.7
2,387,943	-		LRK54_RS10790	0.59	+0.7
2,387,943	-		LRK54_RS10790	0.59	+0.8
2,388,198	+		LRK54_RS10790	0.84	+0.7
2,388,198	+		LRK54_RS10790	0.84	-2.2
2,388,198	+		LRK54_RS10790	0.84	+0.7
2,388,198	+		LRK54_RS10790	0.84	+0.6
2,388,198	+		LRK54_RS10790	0.84	-0.5
2,388,198	+		LRK54_RS10790	0.84	+1.4
2,388,198	+		LRK54_RS10790	0.84	-0.2
2,388,198	+		LRK54_RS10790	0.84	+0.4
2,388,198	+		LRK54_RS10790	0.84	+1.3
2,388,198	+		LRK54_RS10790	0.84	+0.5
2,388,198	+		LRK54_RS10790	0.84	+0.3
2,388,199	-		LRK54_RS10790	0.84	+1.0
2,388,199	-		LRK54_RS10790	0.84	+0.4
2,388,199	-		LRK54_RS10790	0.84	+0.2
2,388,199	-		LRK54_RS10790	0.84	+0.3
2,388,199	-		LRK54_RS10790	0.84	-0.2
2,388,199	-		LRK54_RS10790	0.84	+0.3
2,388,318	+				+0.2
2,388,318	+				+0.3
2,388,318	+				+0.7
2,388,318	+				+0.0
2,388,318	+				-0.9
2,388,318	+				-0.8
2,388,318	+				-0.3
2,388,318	+				+0.3
2,388,318	+				+0.7
2,388,318	+				+0.3
2,388,318	+				+1.3
2,388,319	-				+0.6
2,388,319	-				+0.8
2,388,319	-				+0.6
2,388,319	-				+0.3
2,388,319	-				-0.0
2,388,319	-				-0.5
2,388,321	+				-0.3
2,388,321	+				+2.1
2,388,321	+				+1.7
2,388,321	+				+0.0
2,388,321	+				+0.0
2,388,321	+				+2.0
2,388,321	+				+0.3
2,388,321	+				+0.2
2,388,321	+				+0.8
2,388,321	+				+0.5
2,388,321	+				+0.2
2,388,321	+				+0.9
2,388,321	+				+0.1
2,388,321	+				+1.1
2,388,321	+				+1.5
2,388,321	+				-0.0
2,388,322	-				+0.9
2,388,322	-				+0.7
2,388,322	-				-0.5
2,388,322	-				+0.1
2,388,322	-				+0.4
2,388,322	-				+0.2
2,388,322	-				+0.5
2,388,322	-				+1.5
2,388,322	-				+0.5
2,388,322	-				+0.1
2,388,322	-				+0.0
2,388,322	-				-2.0
2,388,322	-				+0.4
2,388,322	-				+0.0
2,388,322	-				-0.0
2,388,327	+				-0.1
2,388,327	+				+0.4
2,388,327	+				-0.3
2,388,327	+				+0.6
2,388,328	-				+0.2
2,388,328	-				-0.2
2,388,328	-				+1.2
2,388,328	-				+0.2
2,388,328	-				+0.2
2,388,328	-				+0.3
2,388,363	+				-0.1
2,388,363	+				-1.2
2,388,363	+				+1.1
2,388,363	+				+0.0
2,388,363	+				-0.4
2,388,363	+				-0.6
2,388,364	-				-0.3
2,388,364	-				+0.2
2,388,364	-				+0.3
2,388,364	-				+0.2
2,388,364	-				+0.2
2,388,364	-				-1.5