Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10120

Experiment: R2A control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A control
2,222,872	+		LRK54_RS10115	0.38	+0.1
2,222,872	+		LRK54_RS10115	0.38	-0.8
2,222,872	+		LRK54_RS10115	0.38	-0.1
2,222,872	+		LRK54_RS10115	0.38	+1.1
2,222,872	+		LRK54_RS10115	0.38	-2.4
2,222,872	+		LRK54_RS10115	0.38	-0.6
2,222,872	+		LRK54_RS10115	0.38	+0.5
2,222,872	+		LRK54_RS10115	0.38	+0.2
2,222,872	+		LRK54_RS10115	0.38	-0.2
2,222,872	+		LRK54_RS10115	0.38	-0.9
2,222,872	+		LRK54_RS10115	0.38	+0.1
2,222,872	+		LRK54_RS10115	0.38	-0.4
2,222,872	+		LRK54_RS10115	0.38	-2.2
2,222,872	+		LRK54_RS10115	0.38	-0.5
2,222,872	+		LRK54_RS10115	0.38	-0.5
2,222,873	-		LRK54_RS10115	0.38	+0.1
2,222,873	-		LRK54_RS10115	0.38	-0.8
2,222,873	-		LRK54_RS10115	0.38	-1.1
2,222,873	-		LRK54_RS10115	0.38	-0.7
2,222,873	-		LRK54_RS10115	0.38	+0.5
2,222,873	-		LRK54_RS10115	0.38	-0.5
2,222,873	-		LRK54_RS10115	0.38	+0.0
2,222,873	-		LRK54_RS10115	0.38	+0.7
2,222,873	-		LRK54_RS10115	0.38	-0.2
2,222,873	-		LRK54_RS10115	0.38	-0.0
2,222,873	-		LRK54_RS10115	0.38	-0.2
2,223,031	+		LRK54_RS10115	0.50	-0.4
2,223,031	+		LRK54_RS10115	0.50	-0.4
2,223,031	+		LRK54_RS10115	0.50	-1.2
2,223,031	+		LRK54_RS10115	0.50	-0.4
2,223,031	+		LRK54_RS10115	0.50	-0.2
2,223,031	+		LRK54_RS10115	0.50	-0.4
2,223,031	+		LRK54_RS10115	0.50	+0.7
2,223,031	+		LRK54_RS10115	0.50	+0.7
2,223,032	-		LRK54_RS10115	0.51	-0.6
2,223,032	-		LRK54_RS10115	0.51	-0.8
2,223,085	+		LRK54_RS10115	0.55	+0.6
2,223,086	-		LRK54_RS10115	0.55	+1.6
2,223,086	-		LRK54_RS10115	0.55	-0.1
2,223,187	+		LRK54_RS10115	0.63	-0.2
2,223,187	+		LRK54_RS10115	0.63	-0.1
2,223,187	+		LRK54_RS10115	0.63	-0.4
2,223,187	+		LRK54_RS10115	0.63	-0.1
2,223,187	+		LRK54_RS10115	0.63	+0.0
2,223,187	+		LRK54_RS10115	0.63	+1.4
2,223,187	+		LRK54_RS10115	0.63	+0.1
2,223,187	+		LRK54_RS10115	0.63	+0.1
2,223,187	+		LRK54_RS10115	0.63	-0.4
2,223,187	+		LRK54_RS10115	0.63	-0.8
2,223,187	+		LRK54_RS10115	0.63	-0.3
2,223,187	+		LRK54_RS10115	0.63	+0.3
2,223,187	+		LRK54_RS10115	0.63	-1.3
2,223,187	+		LRK54_RS10115	0.63	-0.8
2,223,187	+		LRK54_RS10115	0.63	-0.2
2,223,187	+		LRK54_RS10115	0.63	-0.9
2,223,187	+		LRK54_RS10115	0.63	-1.7
2,223,187	+		LRK54_RS10115	0.63	-0.8
2,223,187	+		LRK54_RS10115	0.63	-0.5
2,223,187	+		LRK54_RS10115	0.63	-2.5
2,223,187	+		LRK54_RS10115	0.63	+0.1
2,223,187	+		LRK54_RS10115	0.63	-0.6
2,223,187	+		LRK54_RS10115	0.63	-0.6
2,223,187	+		LRK54_RS10115	0.63	+0.1
2,223,187	+		LRK54_RS10115	0.63	+1.0
2,223,187	+		LRK54_RS10115	0.63	-1.0
2,223,187	+		LRK54_RS10115	0.63	-0.3
2,223,187	+		LRK54_RS10115	0.63	-0.5
2,223,187	+		LRK54_RS10115	0.63	-0.7
2,223,187	+		LRK54_RS10115	0.63	-0.9
2,223,187	+		LRK54_RS10115	0.63	+0.6
2,223,187	+		LRK54_RS10115	0.63	-0.2
2,223,187	+		LRK54_RS10115	0.63	-1.1
2,223,187	-		LRK54_RS10115	0.63	-0.6
2,223,188	-		LRK54_RS10115	0.63	+0.3
2,223,188	-		LRK54_RS10115	0.63	+0.6
2,223,188	-		LRK54_RS10115	0.63	-0.8
2,223,188	-		LRK54_RS10115	0.63	-0.1
2,223,188	-		LRK54_RS10115	0.63	-1.0
2,223,188	-		LRK54_RS10115	0.63	-0.5
2,223,188	-		LRK54_RS10115	0.63	-0.7
2,223,188	-		LRK54_RS10115	0.63	-0.5
2,223,188	-		LRK54_RS10115	0.63	-0.7
2,223,188	-		LRK54_RS10115	0.63	-0.7
2,223,188	-		LRK54_RS10115	0.63	-0.7
2,223,188	-		LRK54_RS10115	0.63	+0.1
2,223,188	-		LRK54_RS10115	0.63	-0.3
2,223,188	-		LRK54_RS10115	0.63	+0.4
2,223,188	-		LRK54_RS10115	0.63	-0.2
2,223,188	-		LRK54_RS10115	0.63	+0.1
2,223,188	-		LRK54_RS10115	0.63	+1.1
2,223,188	-		LRK54_RS10115	0.63	-0.4
2,223,188	-		LRK54_RS10115	0.63	+0.3
2,223,188	-		LRK54_RS10115	0.63	-0.2
2,223,188	-		LRK54_RS10115	0.63	-0.4
2,223,233	-		LRK54_RS10115	0.67	+0.4
2,223,256	+		LRK54_RS10115	0.68	-0.7
2,223,256	+		LRK54_RS10115	0.68	-1.5
2,223,256	+				-0.7
2,223,265	+		LRK54_RS10115	0.69	-0.4
2,223,265	+		LRK54_RS10115	0.69	-0.0
2,223,265	+		LRK54_RS10115	0.69	+0.2
2,223,265	+		LRK54_RS10115	0.69	+0.2
2,223,266	-		LRK54_RS10115	0.69	+0.8
2,223,266	-		LRK54_RS10115	0.69	-1.4
2,223,266	-		LRK54_RS10115	0.69	-0.4
2,223,266	-		LRK54_RS10115	0.69	+0.1
2,223,266	-		LRK54_RS10115	0.69	-0.7
2,223,436	+		LRK54_RS10115	0.83	+0.3
2,223,436	+		LRK54_RS10115	0.83	-0.2
2,223,436	+		LRK54_RS10115	0.83	-1.2
2,223,436	+		LRK54_RS10115	0.83	+0.1
2,223,436	+		LRK54_RS10115	0.83	-0.9
2,223,436	+		LRK54_RS10115	0.83	-1.1
2,223,436	+		LRK54_RS10115	0.83	-0.7
2,223,436	+		LRK54_RS10115	0.83	-0.3
2,223,436	+		LRK54_RS10115	0.83	+0.4
2,223,436	+		LRK54_RS10115	0.83	-0.3
2,223,436	+		LRK54_RS10115	0.83	-0.0
2,223,436	+		LRK54_RS10115	0.83	+1.8
2,223,436	+		LRK54_RS10115	0.83	-0.9
2,223,436	+		LRK54_RS10115	0.83	-0.2
2,223,436	+		LRK54_RS10115	0.83	+0.1
2,223,436	+		LRK54_RS10115	0.83	-0.3
2,223,436	+		LRK54_RS10115	0.83	-0.5
2,223,436	+		LRK54_RS10115	0.83	+0.5
2,223,436	+		LRK54_RS10115	0.83	-1.2
2,223,436	+		LRK54_RS10115	0.83	-0.7
2,223,436	+		LRK54_RS10115	0.83	-0.4
2,223,436	+		LRK54_RS10115	0.83	-0.4
2,223,436	+		LRK54_RS10115	0.83	-0.6
2,223,436	+		LRK54_RS10115	0.83	+0.4
2,223,436	+		LRK54_RS10115	0.83	-0.1
2,223,436	+		LRK54_RS10115	0.83	-0.1
2,223,436	+		LRK54_RS10115	0.83	+0.1
2,223,437	-		LRK54_RS10115	0.83	+0.3
2,223,437	-		LRK54_RS10115	0.83	-1.1
2,223,437	-		LRK54_RS10115	0.83	+0.1
2,223,437	-		LRK54_RS10115	0.83	-0.5
2,223,437	-		LRK54_RS10115	0.83	-0.1
2,223,437	-		LRK54_RS10115	0.83	-0.8
2,223,437	-		LRK54_RS10115	0.83	-1.1
2,223,437	-		LRK54_RS10115	0.83	-1.3
2,223,437	-		LRK54_RS10115	0.83	+0.2
2,223,437	-		LRK54_RS10115	0.83	+0.2
2,223,437	-		LRK54_RS10115	0.83	+0.2
2,223,437	-		LRK54_RS10115	0.83	-0.2
2,223,437	-		LRK54_RS10115	0.83	-0.0
2,223,437	-		LRK54_RS10115	0.83	+0.2
2,223,437	-		LRK54_RS10115	0.83	-0.3
2,223,437	-		LRK54_RS10115	0.83	-0.2
2,223,437	-		LRK54_RS10115	0.83	-0.5
2,223,437	-		LRK54_RS10115	0.83	-1.4
2,223,437	-		LRK54_RS10115	0.83	-1.5
2,223,437	-		LRK54_RS10115	0.83	-0.1
2,223,437	-		LRK54_RS10115	0.83	-2.8
2,223,437	-		LRK54_RS10115	0.83	-0.2
2,223,437	-		LRK54_RS10115	0.83	-1.1
2,223,676	+				+0.8
2,223,676	+				-1.0
2,223,676	+				-0.4
2,223,676	+				+0.8
2,223,676	+				+0.2
2,223,676	+				-0.3
2,223,676	+				+0.8
2,223,676	+				-0.6
2,223,676	+				-0.1
2,223,676	+				-0.8
2,223,676	+				-0.8
2,223,676	+				-0.5
2,223,676	+				+0.4
2,223,676	+				-0.3
2,223,676	+				-0.4
2,223,677	-				-1.0
2,223,677	-				+0.0
2,223,677	-				-0.8
2,223,677	-				-0.1
2,223,677	-				+0.1
2,223,677	-				-0.2
2,223,677	-				+0.0
2,223,677	-				+0.6
2,223,677	-				-1.2
2,223,677	-				+0.4
2,223,677	-				-0.5
2,223,677	-				+0.6
2,223,677	-				-0.7
2,223,677	-				+0.0
2,223,677	-				-0.2
2,223,677	-				-0.9
2,223,677	-				-0.6
2,223,677	-				-0.4
2,223,677	-				+0.4
2,223,697	-				-0.5
2,223,740	-				-0.3
2,223,740	-				+1.0
2,223,917	+				+1.0
2,223,917	+				+0.4
2,223,917	+				+0.6
2,223,917	+				-0.1
2,223,917	+				-0.5
2,223,917	+				+1.5
2,223,917	+				+1.9
2,223,917	+				+0.4
2,223,917	+				+1.4
2,223,917	+				+0.6
2,223,917	+				+0.6
2,223,917	+				+0.4
2,223,917	+				+0.3
2,223,917	+				+0.2
2,223,917	+				+0.4
2,223,917	+				+0.6
2,223,917	+				-1.1
2,223,917	+				-1.1
2,223,917	+				-0.0
2,223,917	+				+0.6
2,223,917	+				-0.3
2,223,917	+				+0.2
2,223,917	+				+0.8
2,223,917	+				+0.7
2,223,918	-				+1.2
2,223,918	-				+0.1
2,223,918	-				+0.8
2,223,918	-				+0.4
2,223,918	-				+0.3
2,223,918	-				+0.5
2,223,918	-				+0.6
2,223,918	-				-0.2
2,223,918	-				-0.8
2,223,918	-				+0.3
2,223,918	-				+0.8
2,223,918	-				+0.3
2,223,918	-				+2.2
2,223,918	-				+0.6
2,223,918	-				+1.0
2,223,918	-				+0.5
2,223,918	-				+0.2
2,223,918	-				+0.8
2,223,918	-				-0.1
2,223,918	-				+1.2
2,223,918	-				-0.8
2,223,918	-				+0.1
2,223,918	-				+0.2
2,223,918	-				+0.6
2,223,918	-				-0.1
2,223,918	-				+0.7
2,223,918	-				+0.7
2,223,918	-				+0.2
2,223,918	-				+0.1
2,223,918	-				+0.5
2,223,918	-				+0.4
2,223,918	-				-0.1
2,223,918	-				-0.0
2,223,918	-				+1.6
2,223,918	-				+1.6
2,223,918	-				+0.4
2,224,019	+		LRK54_RS10120	0.12	+0.9
2,224,019	+		LRK54_RS10120	0.12	-0.4
2,224,019	+		LRK54_RS10120	0.12	+0.8
2,224,019	+		LRK54_RS10120	0.12	+0.7
2,224,019	+		LRK54_RS10120	0.12	-0.3
2,224,019	+		LRK54_RS10120	0.12	+0.7
2,224,019	+		LRK54_RS10120	0.12	+0.1
2,224,019	+		LRK54_RS10120	0.12	+0.4
2,224,019	+		LRK54_RS10120	0.12	+1.1
2,224,019	+		LRK54_RS10120	0.12	+0.0
2,224,019	+		LRK54_RS10120	0.12	+0.1
2,224,019	+		LRK54_RS10120	0.12	+0.5
2,224,019	+		LRK54_RS10120	0.12	+0.3
2,224,020	-		LRK54_RS10120	0.12	-0.2
2,224,020	-		LRK54_RS10120	0.12	+0.7
2,224,020	-		LRK54_RS10120	0.12	+0.5
2,224,020	-		LRK54_RS10120	0.12	+0.9
2,224,020	-		LRK54_RS10120	0.12	+1.1
2,224,020	-		LRK54_RS10120	0.12	+0.3
2,224,020	-		LRK54_RS10120	0.12	+0.7
2,224,020	-		LRK54_RS10120	0.12	+0.6
2,224,020	-		LRK54_RS10120	0.12	-0.1
2,224,020	-		LRK54_RS10120	0.12	+0.5
2,224,020	-		LRK54_RS10120	0.12	+0.6
2,224,020	-		LRK54_RS10120	0.12	+0.3
2,224,020	-		LRK54_RS10120	0.12	+0.8
2,224,020	-		LRK54_RS10120	0.12	+1.2
2,224,020	-		LRK54_RS10120	0.12	+0.3
2,224,020	-		LRK54_RS10120	0.12	-0.4
2,224,020	-		LRK54_RS10120	0.12	+0.5
2,224,187	+		LRK54_RS10120	0.22	+0.6
2,224,202	+		LRK54_RS10120	0.23	+1.1
2,224,202	+		LRK54_RS10120	0.23	+0.5
2,224,202	+		LRK54_RS10120	0.23	+0.8
2,224,202	+		LRK54_RS10120	0.23	+0.2
2,224,202	+		LRK54_RS10120	0.23	-0.1
2,224,202	+		LRK54_RS10120	0.23	+0.8
2,224,202	+		LRK54_RS10120	0.23	+0.1
2,224,202	+		LRK54_RS10120	0.23	+0.4
2,224,202	+		LRK54_RS10120	0.23	-0.2
2,224,202	+		LRK54_RS10120	0.23	+2.0
2,224,203	-		LRK54_RS10120	0.23	+1.1
2,224,203	-		LRK54_RS10120	0.23	+1.4
2,224,203	-		LRK54_RS10120	0.23	+0.1
2,224,203	-		LRK54_RS10120	0.23	+0.6
2,224,203	-		LRK54_RS10120	0.23	+0.4
2,224,203	-		LRK54_RS10120	0.23	+0.5
2,224,203	-		LRK54_RS10120	0.23	+0.4
2,224,203	-		LRK54_RS10120	0.23	+1.0
2,224,203	-		LRK54_RS10120	0.23	+0.4
2,224,203	-		LRK54_RS10120	0.23	+0.3
2,224,203	-		LRK54_RS10120	0.23	+0.9
2,224,203	-		LRK54_RS10120	0.23	+0.3
2,224,203	-		LRK54_RS10120	0.23	+0.5
2,224,514	+		LRK54_RS10120	0.41	+0.4
2,224,514	+		LRK54_RS10120	0.41	+0.3
2,224,514	+		LRK54_RS10120	0.41	+0.1
2,224,514	+		LRK54_RS10120	0.41	+0.4
2,224,514	+		LRK54_RS10120	0.41	+0.5
2,224,514	+		LRK54_RS10120	0.41	+0.7
2,224,514	+		LRK54_RS10120	0.41	+0.2
2,224,514	+		LRK54_RS10120	0.41	+0.4
2,224,514	+		LRK54_RS10120	0.41	+0.4
2,224,514	+		LRK54_RS10120	0.41	+0.6
2,224,514	+		LRK54_RS10120	0.41	+0.5
2,224,514	+		LRK54_RS10120	0.41	-0.3
2,224,514	+		LRK54_RS10120	0.41	+1.2
2,224,514	+		LRK54_RS10120	0.41	-0.2
2,224,514	+		LRK54_RS10120	0.41	-0.5
2,224,514	+		LRK54_RS10120	0.41	+0.3
2,224,514	+		LRK54_RS10120	0.41	-0.1
2,224,514	+		LRK54_RS10120	0.41	+0.3
2,224,514	+		LRK54_RS10120	0.41	+0.6
2,224,514	+		LRK54_RS10120	0.41	+0.4
2,224,514	+		LRK54_RS10120	0.41	-0.2
2,224,514	+		LRK54_RS10120	0.41	+1.0
2,224,514	+		LRK54_RS10120	0.41	+0.1
2,224,514	+		LRK54_RS10120	0.41	+0.5
2,224,514	+		LRK54_RS10120	0.41	+1.0
2,224,514	+		LRK54_RS10120	0.41	+0.6
2,224,514	+		LRK54_RS10120	0.41	+0.3
2,224,514	+		LRK54_RS10120	0.41	-0.1
2,224,514	+		LRK54_RS10120	0.41	+0.4
2,224,514	+		LRK54_RS10120	0.41	+1.7
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2,224,514	+		LRK54_RS10120	0.41	+1.1
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2,224,515	-		LRK54_RS10120	0.41	-0.1
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2,224,515	-		LRK54_RS10120	0.41	+0.1
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2,224,688	+		LRK54_RS10120	0.51	+1.0
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2,224,689	-		LRK54_RS10120	0.51	+1.1
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2,224,689	-		LRK54_RS10120	0.51	+0.0
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2,224,763	+		LRK54_RS10120	0.55	+0.5
2,224,763	+		LRK54_RS10120	0.55	+0.3
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2,224,764	-		LRK54_RS10120	0.56	+0.5
2,224,764	-		LRK54_RS10120	0.56	+1.0
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2,224,764	-		LRK54_RS10120	0.56	+0.1
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2,224,922	+		LRK54_RS10120	0.65	+0.1
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2,224,923	-		LRK54_RS10120	0.65	+0.1
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2,225,048	+		LRK54_RS10120	0.72	+1.1
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2,225,048	+		LRK54_RS10120	0.72	+0.1
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2,225,048	+		LRK54_RS10120	0.72	+0.1
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2,225,049	-		LRK54_RS10120	0.72	+1.1
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2,225,049	-		LRK54_RS10120	0.72	+0.1
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2,225,108	+		LRK54_RS10120	0.75	+1.3
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2,225,637	-				+1.4
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2,226,320	+		LRK54_RS10125	0.55	-0.9
2,226,320	+		LRK54_RS10125	0.55	+0.6
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2,226,321	-		LRK54_RS10125	0.55	-1.0
2,226,321	-		LRK54_RS10125	0.55	+0.2