Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03084

Experiment: D-Maltose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Maltose (C)
3,232,164	-				+2.0
3,232,164	-		CCNA_03083	0.48	+0.0
3,232,168	+		CCNA_03083	0.49	-1.1
3,232,168	+		CCNA_03083	0.49	-0.6
3,232,168	+		CCNA_03083	0.49	+0.3
3,232,168	+		CCNA_03083	0.49	-0.8
3,232,168	+		CCNA_03083	0.49	-0.9
3,232,168	+		CCNA_03083	0.49	-0.7
3,232,169	-		CCNA_03083	0.49	-0.4
3,232,175	-		CCNA_03083	0.49	-0.5
3,232,176	-		CCNA_03083	0.49	-1.5
3,232,176	-		CCNA_03083	0.49	-0.2
3,232,203	-		CCNA_03083	0.51	-0.4
3,232,232	-		CCNA_03083	0.52	+0.8
3,232,233	+		CCNA_03083	0.52	+0.6
3,232,233	+		CCNA_03083	0.52	-0.9
3,232,242	-		CCNA_03083	0.53	-0.3
3,232,295	+		CCNA_03083	0.56	-0.5
3,232,295	+		CCNA_03083	0.56	-1.0
3,232,303	-		CCNA_03083	0.57	+0.4
3,232,303	-		CCNA_03083	0.57	-0.3
3,232,305	+		CCNA_03083	0.57	-2.5
3,232,307	+		CCNA_03083	0.57	-1.1
3,232,308	-		CCNA_03083	0.57	-0.4
3,232,309	+		CCNA_03083	0.57	-1.7
3,232,315	-		CCNA_03083	0.57	+0.5
3,232,322	+		CCNA_03083	0.58	-0.8
3,232,328	+		CCNA_03083	0.58	-1.3
3,232,336	-		CCNA_03083	0.58	-1.0
3,232,336	-		CCNA_03083	0.58	+0.4
3,232,336	-		CCNA_03083	0.58	-0.0
3,232,351	+		CCNA_03083	0.59	-1.6
3,232,359	-		CCNA_03083	0.60	-0.1
3,232,361	+		CCNA_03083	0.60	+0.6
3,232,364	-		CCNA_03083	0.60	+0.6
3,232,369	-		CCNA_03083	0.60	-0.3
3,232,416	-		CCNA_03083	0.63	+0.1
3,232,462	-		CCNA_03083	0.66	-1.0
3,232,534	+		CCNA_03083	0.70	-1.5
3,232,534	+		CCNA_03083	0.70	+0.8
3,232,541	+		CCNA_03083	0.70	+0.1
3,232,541	+		CCNA_03083	0.70	-0.1
3,232,541	+		CCNA_03083	0.70	-1.7
3,232,549	-		CCNA_03083	0.71	+1.9
3,232,549	-		CCNA_03083	0.71	-0.9
3,232,549	-		CCNA_03083	0.71	-1.2
3,232,549	-		CCNA_03083	0.71	-1.6
3,232,565	-		CCNA_03083	0.72	-0.5
3,232,583	+		CCNA_03083	0.73	-1.1
3,232,587	+		CCNA_03083	0.73	-0.5
3,232,590	-		CCNA_03083	0.73	+0.3
3,232,619	-		CCNA_03083	0.75	-0.5
3,232,633	+		CCNA_03083	0.76	-3.0
3,232,641	-		CCNA_03083	0.76	-3.1
3,232,648	+		CCNA_03083	0.77	+0.2
3,232,702	-		CCNA_03083	0.80	+0.2
3,232,735	+		CCNA_03083	0.82	-0.9
3,232,740	+		CCNA_03083	0.82	-0.5
3,232,740	-		CCNA_03083	0.82	-1.4
3,232,743	-		CCNA_03083	0.82	-0.8
3,232,743	-		CCNA_03083	0.82	+0.5
3,232,757	-		CCNA_03083	0.83	+0.6
3,232,764	+		CCNA_03083	0.83	+0.7
3,232,771	+		CCNA_03083	0.84	-1.6
3,232,771	+		CCNA_03083	0.84	+0.4
3,232,771	+		CCNA_03083	0.84	-0.7
3,232,771	+		CCNA_03083	0.84	-2.5
3,232,771	+		CCNA_03083	0.84	+0.4
3,232,771	+		CCNA_03083	0.84	+0.6
3,232,772	-		CCNA_03083	0.84	-0.8
3,232,779	-		CCNA_03083	0.84	+1.1
3,232,779	-		CCNA_03083	0.84	+1.1
3,232,779	-		CCNA_03083	0.84	+1.1
3,232,779	-		CCNA_03083	0.84	+0.8
3,232,779	-		CCNA_03083	0.84	+0.8
3,232,779	-		CCNA_03083	0.84	+1.8
3,232,781	+		CCNA_03083	0.84	-2.6
3,232,788	-		CCNA_03083	0.85	-2.3
3,232,838	+		CCNA_03083	0.88	-3.1
3,232,845	+		CCNA_03083	0.88	-1.6
3,232,846	-		CCNA_03083	0.88	-0.1
3,232,846	-		CCNA_03083	0.88	-0.7
3,232,853	-		CCNA_03083	0.88	+0.2
3,232,872	+		CCNA_03083	0.90	-0.1
3,232,879	+		CCNA_03083	0.90	-1.8
3,232,888	-				-0.1
3,232,918	-				+0.4
3,232,946	-				-0.0
3,232,970	+				-1.9
3,232,970	+				-1.5
3,232,970	+				-2.1
3,232,978	-				+0.1
3,232,978	-				-0.1
3,233,014	-				-0.6
3,233,014	-				+0.1
3,233,047	+				+2.4
3,233,047	+				-1.3
3,233,047	+				-1.9
3,233,055	-				-0.8
3,233,055	-				+2.3
3,233,055	-				+0.9
3,233,055	-				+0.4
3,233,061	-				-1.9
3,233,069	+				-1.0
3,233,077	+				-0.9
3,233,079	-				-0.0
3,233,079	-				-0.9
3,233,079	-				-1.0
3,233,091	+				-0.6
3,233,099	-				-0.7
3,233,110	-				-1.9
3,233,153	+				-1.1
3,233,162	-				+0.3
3,233,189	+				-2.3
3,233,197	-				-1.0
3,233,197	-				+0.1
3,233,197	-				-2.9
3,233,197	-				+1.7
3,233,197	-				+0.0
3,233,298	+		CCNA_03084	0.12	-1.5
3,233,298	+		CCNA_03084	0.12	-0.8
3,233,298	+		CCNA_03084	0.12	+0.9
3,233,298	+		CCNA_03084	0.12	-2.0
3,233,306	-		CCNA_03084	0.12	-1.4
3,233,306	-		CCNA_03084	0.12	+0.6
3,233,306	-		CCNA_03084	0.12	+0.9
3,233,313	+		CCNA_03084	0.13	-1.3
3,233,317	+		CCNA_03084	0.13	-0.9
3,233,325	-		CCNA_03084	0.14	-2.0
3,233,325	-		CCNA_03084	0.14	-1.4
3,233,332	-		CCNA_03084	0.14	+0.2
3,233,339	+		CCNA_03084	0.15	-1.5
3,233,346	-		CCNA_03084	0.15	-0.2
3,233,346	-		CCNA_03084	0.15	+1.6
3,233,352	-		CCNA_03084	0.16	+1.0
3,233,357	+		CCNA_03084	0.16	-0.8
3,233,373	+		CCNA_03084	0.18	-0.6
3,233,373	+		CCNA_03084	0.18	-0.4
3,233,412	-		CCNA_03084	0.21	+0.0
3,233,416	+		CCNA_03084	0.21	-1.7
3,233,442	-		CCNA_03084	0.23	-1.9
3,233,451	+		CCNA_03084	0.24	-0.7
3,233,470	-		CCNA_03084	0.25	-0.1
3,233,485	+		CCNA_03084	0.27	+0.4
3,233,488	-		CCNA_03084	0.27	-0.7
3,233,493	-		CCNA_03084	0.27	-1.6
3,233,493	-		CCNA_03084	0.27	-1.0
3,233,493	-		CCNA_03084	0.27	+0.4
3,233,493	-		CCNA_03084	0.27	-0.4
3,233,493	-		CCNA_03084	0.27	-0.8
3,233,493	-		CCNA_03084	0.27	-2.1
3,233,509	+		CCNA_03084	0.29	-0.9
3,233,522	-		CCNA_03084	0.30	+2.9
3,233,531	+		CCNA_03084	0.30	-1.9
3,233,537	-		CCNA_03084	0.31	-1.0
3,233,562	+		CCNA_03084	0.33	+0.7
3,233,582	-		CCNA_03084	0.34	-1.5
3,233,611	-		CCNA_03084	0.37	-1.6
3,233,648	-		CCNA_03084	0.40	-0.9
3,233,667	-		CCNA_03084	0.41	-0.1
3,233,673	+		CCNA_03084	0.42	-0.7
3,233,674	+		CCNA_03084	0.42	-1.7
3,233,682	-		CCNA_03084	0.43	-0.4
3,233,682	-		CCNA_03084	0.43	-2.1
3,233,696	+		CCNA_03084	0.44	-1.7
3,233,696	+		CCNA_03084	0.44	-2.4
3,233,745	-		CCNA_03084	0.48	+0.2
3,233,777	+		CCNA_03084	0.50	-2.7
3,233,808	-		CCNA_03084	0.53	-0.3
3,233,830	+		CCNA_03084	0.54	-1.3
3,233,838	-		CCNA_03084	0.55	-0.6
3,233,843	-		CCNA_03084	0.56	-0.7
3,233,845	+		CCNA_03084	0.56	-0.0
3,233,848	-		CCNA_03084	0.56	-0.6
3,233,855	+		CCNA_03084	0.56	-1.7
3,233,857	+		CCNA_03084	0.57	-0.9
3,233,858	-		CCNA_03084	0.57	+0.2
3,233,912	-		CCNA_03084	0.61	+0.4
3,233,926	-		CCNA_03084	0.62	+0.7
3,233,926	-		CCNA_03084	0.62	+0.5
3,233,926	-		CCNA_03084	0.62	-0.1
3,233,942	+		CCNA_03084	0.64	-1.1
3,233,954	-		CCNA_03084	0.64	-0.9
3,234,006	-		CCNA_03084	0.69	-0.1
3,234,021	-		CCNA_03084	0.70	+0.4
3,234,067	-		CCNA_03084	0.74	-1.4
3,234,073	+		CCNA_03084	0.74	-1.4
3,234,119	+		CCNA_03084	0.78	-0.1
3,234,157	+		CCNA_03084	0.81	-0.6
3,234,165	-		CCNA_03084	0.82	+1.0
3,234,186	+		CCNA_03084	0.83	-0.1
3,234,205	-		CCNA_03084	0.85	-0.5
3,234,262	-		CCNA_03084	0.89	-0.6
3,234,267	-		CCNA_03084	0.90	+0.4
3,234,272	-				-0.2
3,234,283	-				-1.4
3,234,302	+				+0.6
3,234,302	+				+0.5
3,234,305	-				-0.6
3,234,310	-				+0.3
3,234,310	-				+0.2
3,234,330	+				-0.3
3,234,331	+				+0.9
3,234,376	+				-1.1
3,234,391	-				-0.7
3,234,393	+				-1.6
3,234,393	+				+1.0
3,234,393	+				-0.9
3,234,401	-				+0.1
3,234,401	-				+0.3
3,234,401	-				+0.3
3,234,460	-				-0.1
3,234,469	+				-1.2
3,234,477	-				-0.1
3,234,477	-				+0.6
3,234,495	+				-1.3
3,234,500	+				-1.6
3,234,508	+				+0.9
3,234,540	+				-1.7
3,234,547	+				+0.6
3,234,569	-				-0.7
3,234,635	+		CCNA_03085	0.10	-0.6
3,234,644	-		CCNA_03085	0.11	+1.0
3,234,644	-		CCNA_03085	0.11	-1.4
3,234,644	-		CCNA_03085	0.11	+1.7
3,234,644	-		CCNA_03085	0.11	+0.1
3,234,673	+		CCNA_03085	0.14	+0.6
3,234,687	-		CCNA_03085	0.15	-0.1
3,234,700	-		CCNA_03085	0.17	+0.3
3,234,768	-		CCNA_03085	0.24	-0.8
3,234,778	-		CCNA_03085	0.25	-0.5
3,234,805	+		CCNA_03085	0.27	-0.3
3,234,805	+		CCNA_03085	0.27	-0.6
3,234,805	+		CCNA_03085	0.27	-0.8
3,234,807	+		CCNA_03085	0.28	+0.3
3,234,807	+		CCNA_03085	0.28	-2.8
3,234,807	+		CCNA_03085	0.28	-0.5
3,234,813	-		CCNA_03085	0.28	+0.3
3,234,813	-		CCNA_03085	0.28	+0.4
3,234,813	-		CCNA_03085	0.28	-0.3
3,234,813	-		CCNA_03085	0.28	-0.1
3,234,815	-		CCNA_03085	0.28	-1.1
3,234,815	-		CCNA_03085	0.28	+0.2
3,234,835	+		CCNA_03085	0.30	-1.3
3,234,867	+		CCNA_03085	0.34	-0.1
3,234,891	+		CCNA_03085	0.36	+0.2
3,234,901	+		CCNA_03085	0.37	-2.6
3,234,920	-		CCNA_03085	0.39	-1.8
3,234,939	-		CCNA_03085	0.41	+0.1
3,234,941	+		CCNA_03085	0.41	-1.6
3,234,992	+		CCNA_03085	0.47	-2.4
3,235,008	-		CCNA_03085	0.48	-2.3
3,235,031	+		CCNA_03085	0.51	+0.7
3,235,031	+		CCNA_03085	0.51	-1.1
3,235,039	-		CCNA_03085	0.51	-0.1
3,235,039	-		CCNA_03085	0.51	+1.9
3,235,039	-		CCNA_03085	0.51	+0.1
3,235,138	+		CCNA_03085	0.61	-0.7
3,235,146	-		CCNA_03085	0.62	-0.8
3,235,154	-		CCNA_03085	0.63	-1.0
3,235,157	+		CCNA_03085	0.63	-0.7
3,235,157	+		CCNA_03085	0.63	-0.1
3,235,165	+		CCNA_03085	0.64	-1.0
3,235,165	-		CCNA_03085	0.64	+3.0
3,235,165	-		CCNA_03085	0.64	+0.4
3,235,171	+		CCNA_03085	0.65	-1.4
3,235,171	+		CCNA_03085	0.65	-1.2
3,235,171	+		CCNA_03085	0.65	+2.2
3,235,171	+		CCNA_03085	0.65	+0.2
3,235,171	+		CCNA_03085	0.65	-3.0
3,235,179	-		CCNA_03085	0.66	+0.9
3,235,179	-		CCNA_03085	0.66	+0.4
3,235,179	-		CCNA_03085	0.66	+0.4
3,235,191	+		CCNA_03085	0.67	-1.1
3,235,191	+		CCNA_03085	0.67	+0.3
3,235,199	-		CCNA_03085	0.68	+0.1
3,235,199	-		CCNA_03085	0.68	-0.6
3,235,199	-		CCNA_03085	0.68	-1.0
3,235,222	+		CCNA_03085	0.70	+0.2
3,235,231	-		CCNA_03085	0.71	+0.6
3,235,236	+		CCNA_03085	0.71	-3.2
3,235,261	+		CCNA_03085	0.74	+0.3
3,235,261	+		CCNA_03085	0.74	+1.9
3,235,264	-		CCNA_03085	0.74	+0.4
3,235,269	-		CCNA_03085	0.75	-0.1
3,235,311	-		CCNA_03085	0.79	-0.4
3,235,321	-		CCNA_03085	0.80	-0.5
3,235,345	+		CCNA_03085	0.83	-0.7
3,235,345	+		CCNA_03085	0.83	-1.6
3,235,353	-		CCNA_03085	0.83	-0.5
3,235,353	-		CCNA_03085	0.83	-0.8
3,235,363	+		CCNA_03085	0.84	-3.1
3,235,371	-		CCNA_03085	0.85	-1.4
3,235,371	-		CCNA_03085	0.85	+0.1
3,235,371	-		CCNA_03085	0.85	-0.3
3,235,374	+		CCNA_03085	0.86	-0.1
3,235,374	+		CCNA_03085	0.86	-2.0
3,235,382	-		CCNA_03085	0.86	+0.0
3,235,386	+		CCNA_03085	0.87	+0.1