Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02384 and SMc02385 are separated by 95 nucleotides SMc02385 and SMc02386 are separated by 28 nucleotides
SMc02384: SMc02384 - glycosyltransferase transmembrane protein, at 1,138,707 to 1,139,726
SMc02384
SMc02385: SMc02385 - hypothetical protein, at 1,139,822 to 1,140,778
SMc02385
SMc02386: SMc02386 - AMP nucleosidase, at 1,140,807 to 1,142,309
SMc02386
Position (kb)
1139
1140
1141 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1138.912 kb on + strand, within SMc02384 at 1138.913 kb on - strand, within SMc02384 at 1138.988 kb on - strand, within SMc02384 at 1139.046 kb on - strand, within SMc02384 at 1139.051 kb on - strand, within SMc02384 at 1139.065 kb on + strand at 1139.065 kb on + strand, within SMc02384 at 1139.216 kb on - strand, within SMc02384 at 1139.216 kb on - strand, within SMc02384 at 1139.346 kb on + strand, within SMc02384 at 1139.662 kb on - strand at 1139.765 kb on - strand at 1139.765 kb on - strand at 1139.765 kb on - strand at 1139.768 kb on + strand at 1139.776 kb on + strand at 1139.776 kb on + strand at 1139.777 kb on - strand at 1139.778 kb on + strand at 1139.778 kb on + strand at 1139.778 kb on + strand at 1139.779 kb on - strand at 1139.827 kb on + strand at 1139.827 kb on + strand at 1140.044 kb on + strand, within SMc02385 at 1140.617 kb on + strand, within SMc02385 at 1140.808 kb on + strand at 1140.826 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 1,138,912 + SMc02384 0.20 -0.5 1,138,913 - SMc02384 0.20 +0.5 1,138,988 - SMc02384 0.28 -0.7 1,139,046 - SMc02384 0.33 -0.5 1,139,051 - SMc02384 0.34 +0.5 1,139,065 + +0.7 1,139,065 + SMc02384 0.35 -0.7 1,139,216 - SMc02384 0.50 -0.5 1,139,216 - SMc02384 0.50 -1.2 1,139,346 + SMc02384 0.63 -1.2 1,139,662 - -3.0 1,139,765 - -0.1 1,139,765 - -0.3 1,139,765 - +0.8 1,139,768 + -0.9 1,139,776 + -0.2 1,139,776 + -0.2 1,139,777 - -0.5 1,139,778 + +0.7 1,139,778 + -0.3 1,139,778 + -0.2 1,139,779 - -0.1 1,139,827 + +0.1 1,139,827 + +0.1 1,140,044 + SMc02385 0.23 -1.2 1,140,617 + SMc02385 0.83 -1.2 1,140,808 + +0.1 1,140,826 + +0.2
Or see this region's nucleotide sequence