Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01365 and SMc01364 are separated by 2 nucleotides SMc01364 and SMc01363 are separated by 191 nucleotides
SMc01365: SMc01365 - exoribonuclease II protein, at 1,414,625 to 1,416,994
SMc01365
SMc01364: SMc01364 - DNA topoisomerase I, at 1,416,997 to 1,419,699
SMc01364
SMc01363: SMc01363 - hypothetical protein, at 1,419,891 to 1,421,042
SMc01363
Position (kb)
1416
1417
1418
1419
1420 Strain fitness (log2 ratio)
-2
-1
0
1 at 1416.086 kb on + strand, within SMc01365 at 1416.086 kb on + strand, within SMc01365 at 1416.190 kb on + strand, within SMc01365 at 1416.191 kb on - strand, within SMc01365 at 1416.474 kb on + strand, within SMc01365 at 1416.475 kb on - strand, within SMc01365 at 1416.664 kb on + strand, within SMc01365 at 1416.664 kb on + strand, within SMc01365 at 1416.774 kb on - strand at 1417.265 kb on + strand at 1417.266 kb on - strand at 1417.266 kb on - strand at 1417.294 kb on - strand, within SMc01364 at 1417.294 kb on - strand at 1419.781 kb on + strand at 1419.781 kb on + strand at 1419.782 kb on - strand at 1419.782 kb on - strand at 1419.785 kb on + strand at 1419.785 kb on + strand at 1419.785 kb on + strand at 1419.785 kb on + strand at 1419.785 kb on + strand at 1419.786 kb on - strand at 1419.786 kb on - strand at 1419.786 kb on - strand at 1419.786 kb on - strand at 1419.787 kb on + strand at 1419.788 kb on - strand at 1419.912 kb on + strand at 1419.912 kb on + strand at 1419.971 kb on + strand at 1419.971 kb on + strand at 1419.971 kb on + strand at 1419.972 kb on - strand at 1419.972 kb on - strand at 1419.998 kb on + strand at 1419.999 kb on - strand at 1419.999 kb on - strand at 1419.999 kb on - strand at 1420.294 kb on + strand, within SMc01363
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 1,416,086 + SMc01365 0.62 +0.1 1,416,086 + SMc01365 0.62 -0.2 1,416,190 + SMc01365 0.66 -0.3 1,416,191 - SMc01365 0.66 -0.5 1,416,474 + SMc01365 0.78 -0.1 1,416,475 - SMc01365 0.78 -0.0 1,416,664 + SMc01365 0.86 -0.2 1,416,664 + SMc01365 0.86 -1.4 1,416,774 - -0.5 1,417,265 + -2.2 1,417,266 - -0.6 1,417,266 - +0.1 1,417,294 - SMc01364 0.11 -0.9 1,417,294 - +0.6 1,419,781 + +0.5 1,419,781 + -0.0 1,419,782 - +0.3 1,419,782 - -0.3 1,419,785 + -0.5 1,419,785 + -0.6 1,419,785 + +0.1 1,419,785 + -0.5 1,419,785 + -0.2 1,419,786 - +0.6 1,419,786 - +1.5 1,419,786 - +0.9 1,419,786 - +0.7 1,419,787 + -1.0 1,419,788 - +1.1 1,419,912 + +1.0 1,419,912 + +1.2 1,419,971 + +0.9 1,419,971 + +0.5 1,419,971 + -1.0 1,419,972 - +1.2 1,419,972 - +0.7 1,419,998 + +0.0 1,419,999 - +0.1 1,419,999 - -0.2 1,419,999 - +0.9 1,420,294 + SMc01363 0.35 -0.3
Or see this region's nucleotide sequence