Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00820 and SMc00821 are separated by 210 nucleotides SMc00821 and SMc00822 are separated by 278 nucleotides SMc00822 and SMc00823 overlap by 1 nucleotides
SMc00820: SMc00820 - transcriptional regulator, at 841,879 to 842,829
SMc00820
SMc00821: SMc00821 - hypothetical protein, at 843,040 to 843,336
SMc00821
SMc00822: SMc00822 - hypothetical protein, at 843,615 to 843,911
SMc00822
SMc00823: SMc00823 - hypothetical protein, at 843,911 to 844,306
SMc00823
Position (kb) 843
844 Strain fitness (log2 ratio) -2
-1
0
1
2 at 842.210 kb on + strand, within SMc00820 at 842.210 kb on + strand, within SMc00820 at 842.456 kb on + strand, within SMc00820 at 842.456 kb on + strand, within SMc00820 at 842.456 kb on + strand, within SMc00820 at 842.456 kb on + strand, within SMc00820 at 842.456 kb on + strand, within SMc00820 at 842.457 kb on - strand, within SMc00820 at 842.457 kb on - strand, within SMc00820 at 842.457 kb on - strand, within SMc00820 at 842.510 kb on + strand, within SMc00820 at 842.522 kb on + strand, within SMc00820 at 842.788 kb on + strand at 842.839 kb on - strand at 842.843 kb on - strand at 842.844 kb on + strand at 842.844 kb on + strand at 842.844 kb on + strand at 842.845 kb on - strand at 842.845 kb on - strand at 842.944 kb on + strand at 843.275 kb on - strand, within SMc00821 at 843.275 kb on - strand, within SMc00821 at 843.313 kb on + strand at 843.314 kb on - strand at 843.465 kb on - strand at 843.465 kb on - strand at 843.465 kb on - strand at 843.474 kb on + strand at 843.475 kb on - strand at 843.475 kb on - strand at 843.475 kb on - strand at 843.495 kb on + strand at 843.511 kb on + strand at 843.511 kb on + strand at 843.511 kb on + strand at 843.511 kb on + strand at 843.512 kb on - strand at 843.546 kb on - strand at 843.574 kb on + strand at 843.574 kb on + strand at 843.574 kb on + strand at 843.574 kb on + strand at 843.575 kb on - strand at 843.575 kb on - strand at 843.575 kb on - strand at 843.575 kb on - strand at 843.575 kb on - strand at 843.577 kb on + strand at 843.796 kb on + strand, within SMc00822 at 843.796 kb on + strand, within SMc00822 at 843.796 kb on + strand, within SMc00822 at 843.797 kb on - strand, within SMc00822 at 843.806 kb on + strand, within SMc00822 at 843.806 kb on + strand, within SMc00822 at 843.806 kb on + strand, within SMc00822 at 843.811 kb on - strand, within SMc00822 at 843.909 kb on + strand at 843.931 kb on - strand at 843.931 kb on - strand at 843.931 kb on - strand at 844.129 kb on + strand, within SMc00823 at 844.214 kb on - strand, within SMc00823 at 844.271 kb on + strand at 844.272 kb on - strand at 844.299 kb on - strand at 844.304 kb on + strand at 844.323 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 842,210 + SMc00820 0.35 -1.2 842,210 + SMc00820 0.35 +1.4 842,456 + SMc00820 0.61 +0.2 842,456 + SMc00820 0.61 -0.2 842,456 + SMc00820 0.61 -0.2 842,456 + SMc00820 0.61 +0.0 842,456 + SMc00820 0.61 -0.3 842,457 - SMc00820 0.61 +0.4 842,457 - SMc00820 0.61 -0.1 842,457 - SMc00820 0.61 +0.1 842,510 + SMc00820 0.66 -0.2 842,522 + SMc00820 0.68 -0.6 842,788 + +0.8 842,839 - -0.7 842,843 - +0.1 842,844 + +0.6 842,844 + -1.8 842,844 + -0.3 842,845 - -0.2 842,845 - -0.4 842,944 + -0.1 843,275 - SMc00821 0.79 -0.6 843,275 - SMc00821 0.79 -2.1 843,313 + -0.1 843,314 - +0.0 843,465 - -0.1 843,465 - -0.7 843,465 - -0.3 843,474 + -0.6 843,475 - -0.2 843,475 - +0.4 843,475 - +0.4 843,495 + +1.8 843,511 + -0.3 843,511 + +0.8 843,511 + -0.8 843,511 + -0.0 843,512 - +0.3 843,546 - -0.2 843,574 + -1.8 843,574 + -0.1 843,574 + -0.4 843,574 + -0.3 843,575 - -0.1 843,575 - +0.4 843,575 - +0.1 843,575 - -0.0 843,575 - -0.1 843,577 + -0.4 843,796 + SMc00822 0.61 -0.3 843,796 + SMc00822 0.61 -0.2 843,796 + SMc00822 0.61 -0.4 843,797 - SMc00822 0.61 -0.8 843,806 + SMc00822 0.64 -0.2 843,806 + SMc00822 0.64 +0.3 843,806 + SMc00822 0.64 -0.3 843,811 - SMc00822 0.66 +0.6 843,909 + +0.2 843,931 - +0.3 843,931 - +0.0 843,931 - -0.0 844,129 + SMc00823 0.55 -0.3 844,214 - SMc00823 0.77 -0.3 844,271 + +0.2 844,272 - -1.4 844,299 - +0.9 844,304 + +0.2 844,323 + -0.4
Or see this region's nucleotide sequence