Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21163 and SM_b21164 are separated by 2 nucleotides SM_b21164 and SM_b21165 are separated by 1 nucleotides
SM_b21163: SM_b21163 - Urocanate hydratase (EC 4.2.1.49) <small>(from data)</small>, at 908,169 to 909,842
_b21163
SM_b21164: SM_b21164 - N-formylglutamate deformylase (EC 3.5.1.68) <small>(from data)</small>, at 909,845 to 910,660
_b21164
SM_b21165: SM_b21165 - Histidine ammonia-lyase (EC 4.3.1.3) <small>(from data)</small>, at 910,662 to 912,197
_b21165
Position (kb) 909
910
911 Strain fitness (log2 ratio) -1
0
1 at 908.878 kb on + strand, within SM_b21163 at 909.025 kb on + strand, within SM_b21163 at 909.026 kb on - strand, within SM_b21163 at 909.106 kb on - strand, within SM_b21163 at 909.106 kb on - strand, within SM_b21163 at 909.106 kb on - strand, within SM_b21163 at 909.106 kb on - strand, within SM_b21163 at 909.106 kb on - strand, within SM_b21163 at 909.397 kb on + strand, within SM_b21163 at 909.398 kb on - strand, within SM_b21163 at 909.430 kb on + strand, within SM_b21163 at 909.430 kb on + strand, within SM_b21163 at 909.431 kb on - strand, within SM_b21163 at 909.431 kb on - strand, within SM_b21163 at 909.460 kb on + strand, within SM_b21163 at 909.691 kb on + strand at 909.821 kb on + strand at 909.822 kb on - strand at 910.154 kb on - strand, within SM_b21164 at 910.325 kb on + strand, within SM_b21164 at 910.326 kb on - strand, within SM_b21164 at 910.326 kb on - strand, within SM_b21164 at 910.364 kb on - strand, within SM_b21164 at 910.454 kb on + strand, within SM_b21164 at 910.455 kb on - strand, within SM_b21164 at 910.455 kb on - strand, within SM_b21164 at 910.455 kb on - strand, within SM_b21164 at 910.455 kb on - strand, within SM_b21164 at 910.513 kb on - strand, within SM_b21164 at 910.759 kb on + strand at 910.759 kb on + strand at 910.759 kb on + strand at 911.104 kb on + strand, within SM_b21165 at 911.359 kb on + strand, within SM_b21165 at 911.359 kb on + strand, within SM_b21165 at 911.359 kb on + strand, within SM_b21165 at 911.360 kb on - strand, within SM_b21165 at 911.360 kb on - strand, within SM_b21165 at 911.459 kb on + strand, within SM_b21165
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 908,878 + SM_b21163 0.42 +0.1 909,025 + SM_b21163 0.51 +0.3 909,026 - SM_b21163 0.51 +1.4 909,106 - SM_b21163 0.56 +0.4 909,106 - SM_b21163 0.56 +0.1 909,106 - SM_b21163 0.56 -0.5 909,106 - SM_b21163 0.56 +0.9 909,106 - SM_b21163 0.56 +0.2 909,397 + SM_b21163 0.73 +1.2 909,398 - SM_b21163 0.73 +0.1 909,430 + SM_b21163 0.75 -0.6 909,430 + SM_b21163 0.75 -0.3 909,431 - SM_b21163 0.75 -0.3 909,431 - SM_b21163 0.75 -0.4 909,460 + SM_b21163 0.77 +0.2 909,691 + -0.3 909,821 + -0.1 909,822 - -0.2 910,154 - SM_b21164 0.38 -0.1 910,325 + SM_b21164 0.59 +0.9 910,326 - SM_b21164 0.59 -0.3 910,326 - SM_b21164 0.59 +0.9 910,364 - SM_b21164 0.64 +0.8 910,454 + SM_b21164 0.75 +0.8 910,455 - SM_b21164 0.75 +0.2 910,455 - SM_b21164 0.75 +0.5 910,455 - SM_b21164 0.75 -0.4 910,455 - SM_b21164 0.75 +0.2 910,513 - SM_b21164 0.82 +0.9 910,759 + +0.6 910,759 + +0.2 910,759 + +0.4 911,104 + SM_b21165 0.29 +0.0 911,359 + SM_b21165 0.45 -0.8 911,359 + SM_b21165 0.45 -0.4 911,359 + SM_b21165 0.45 +0.1 911,360 - SM_b21165 0.45 -1.2 911,360 - SM_b21165 0.45 +0.6 911,459 + SM_b21165 0.52 +0.3
Or see this region's nucleotide sequence