Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_5090

Experiment: KB with Chloramphenicol 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Chloramphenicol 12.5 ug/ml
6,038,226	+		Psyr_5089	0.14	+1.2
6,038,227	-		Psyr_5089	0.14	-0.0
6,038,227	-		Psyr_5089	0.14	+0.4
6,038,483	+		Psyr_5089	0.38	+1.6
6,038,483	+		Psyr_5089	0.38	-1.1
6,038,483	+		Psyr_5089	0.38	+0.9
6,038,483	+		Psyr_5089	0.38	+0.4
6,038,483	+		Psyr_5089	0.38	+0.5
6,038,484	-		Psyr_5089	0.38	+0.6
6,038,484	-		Psyr_5089	0.38	+0.5
6,038,484	-		Psyr_5089	0.38	+0.6
6,038,926	-		Psyr_5089	0.79	-1.1
6,038,926	-		Psyr_5089	0.79	+1.2
6,039,182	+				-0.2
6,039,182	+				-0.0
6,039,182	+				-0.4
6,039,182	+				+0.1
6,039,182	+				+1.1
6,039,183	-				-0.1
6,039,183	-				-0.8
6,039,183	-				-0.3
6,039,189	+				+0.4
6,039,189	+				+0.2
6,039,189	+				-2.3
6,039,189	+				+0.8
6,039,189	+				-0.5
6,039,189	+				+1.6
6,039,190	-				+0.7
6,039,190	-				-1.5
6,039,241	-				-1.3
6,039,466	-		Psyr_5090	0.21	+0.6
6,039,524	+		Psyr_5090	0.25	+0.9
6,039,524	+		Psyr_5090	0.25	-0.4
6,039,524	+		Psyr_5090	0.25	+0.4
6,039,524	+		Psyr_5090	0.25	+1.1
6,039,524	+		Psyr_5090	0.25	+0.2
6,039,524	+		Psyr_5090	0.25	+0.1
6,039,524	+		Psyr_5090	0.25	-0.4
6,039,525	-		Psyr_5090	0.25	-0.3
6,039,525	-		Psyr_5090	0.25	+1.1
6,039,525	-		Psyr_5090	0.25	-0.5
6,039,567	+		Psyr_5090	0.28	+0.2
6,039,567	+		Psyr_5090	0.28	-1.4
6,039,567	+		Psyr_5090	0.28	+1.6
6,039,567	+		Psyr_5090	0.28	-0.2
6,039,567	+		Psyr_5090	0.28	-2.3
6,039,568	-		Psyr_5090	0.28	-0.9
6,039,568	-				+0.5
6,039,610	+		Psyr_5090	0.32	+0.2
6,039,610	+		Psyr_5090	0.32	+0.0
6,039,611	-		Psyr_5090	0.32	+1.5
6,039,613	-		Psyr_5090	0.32	-1.9
6,039,751	-		Psyr_5090	0.43	+0.8
6,039,751	-		Psyr_5090	0.43	+0.5
6,039,751	-		Psyr_5090	0.43	+0.0
6,039,793	+		Psyr_5090	0.46	+0.9
6,039,793	+		Psyr_5090	0.46	+0.5
6,040,376	+				+0.8
6,040,376	+				-2.1
6,040,376	+				+0.6
6,040,377	-				+0.1
6,040,469	+				+0.1
6,040,469	+				-0.5
6,040,469	+				+0.6
6,040,470	-				+0.8
6,040,470	-				-0.1
6,040,514	+				+0.3
6,040,514	+				+0.6
6,040,514	+				-0.4
6,040,665	+				+0.5
6,040,665	+				-0.4
6,040,665	+				-0.5
6,040,665	+				+0.1
6,040,665	+				-0.2
6,040,665	+				+1.1
6,040,665	+				-0.2
6,040,665	+				-0.5
6,040,665	+				-0.3
6,040,665	+				-0.2
6,040,666	-				+0.4
6,040,666	-				+0.7
6,040,666	-				-0.5
6,040,666	-				+0.7
6,040,666	-				+0.9
6,040,666	-				+0.6
6,040,666	-				+1.2
6,040,666	-				+0.5
6,040,666	-				+0.8
6,040,666	-				+1.1
6,040,666	-				+0.1
6,040,666	-				-0.7
6,040,666	-				-1.9
6,040,666	-				+0.2
6,040,666	-				+0.3
6,040,666	-				+1.6
6,040,666	-				-1.6
6,040,726	+		Psyr_5091	0.12	-0.8
6,040,773	+		Psyr_5091	0.14	-1.3
6,040,773	+		Psyr_5091	0.14	+1.4
6,040,773	+		Psyr_5091	0.14	+1.5
6,040,773	+		Psyr_5091	0.14	+2.0
6,040,773	+		Psyr_5091	0.14	+0.3
6,040,773	+		Psyr_5091	0.14	+0.4
6,040,773	+		Psyr_5091	0.14	+0.3
6,040,773	+		Psyr_5091	0.14	+0.7
6,040,773	+		Psyr_5091	0.14	-2.1
6,040,773	+		Psyr_5091	0.14	-0.4
6,040,774	-		Psyr_5091	0.14	+0.9
6,040,774	-		Psyr_5091	0.14	+0.2
6,040,774	-		Psyr_5091	0.14	+0.5
6,040,774	-		Psyr_5091	0.14	+0.6
6,040,774	-		Psyr_5091	0.14	-0.8
6,040,774	-		Psyr_5091	0.14	-1.0
6,040,774	-		Psyr_5091	0.14	+0.1
6,040,774	-		Psyr_5091	0.14	-0.1
6,040,774	-		Psyr_5091	0.14	+1.6
6,040,774	-		Psyr_5091	0.14	+0.6
6,040,774	-		Psyr_5091	0.14	+0.1
6,040,774	-		Psyr_5091	0.14	+1.7
6,040,774	-		Psyr_5091	0.14	+0.3
6,040,774	-		Psyr_5091	0.14	+0.7
6,040,902	+		Psyr_5091	0.22	+0.6
6,040,902	+		Psyr_5091	0.22	-1.6
6,040,902	+		Psyr_5091	0.22	+0.3
6,040,902	+		Psyr_5091	0.22	+1.3
6,040,902	+		Psyr_5091	0.22	+1.9
6,040,902	+		Psyr_5091	0.22	+0.7
6,040,902	+		Psyr_5091	0.22	+0.2
6,040,902	+		Psyr_5091	0.22	-0.0
6,040,902	+		Psyr_5091	0.22	-1.3
6,040,903	-		Psyr_5091	0.22	+0.2
6,040,903	-		Psyr_5091	0.22	+0.1
6,040,903	-		Psyr_5091	0.22	+0.9
6,040,903	-		Psyr_5091	0.22	+1.1
6,040,903	-		Psyr_5091	0.22	+0.2
6,040,903	-		Psyr_5091	0.22	+0.6
6,040,903	-		Psyr_5091	0.22	-1.3
6,040,903	-		Psyr_5091	0.22	-0.8
6,041,114	+		Psyr_5091	0.34	+1.0
6,041,115	-		Psyr_5091	0.34	-0.6
6,041,115	-		Psyr_5091	0.34	-0.9
6,041,115	-		Psyr_5091	0.34	+0.1
6,041,205	+		Psyr_5091	0.39	-1.2
6,041,205	+		Psyr_5091	0.39	+1.1
6,041,205	+		Psyr_5091	0.39	+0.9
6,041,205	+		Psyr_5091	0.39	-0.0
6,041,400	+		Psyr_5091	0.50	-0.3
6,041,400	+		Psyr_5091	0.50	+0.5
6,041,400	+		Psyr_5091	0.50	-0.0
6,041,400	+		Psyr_5091	0.50	-0.7
6,041,400	+		Psyr_5091	0.50	-1.5
6,041,400	+		Psyr_5091	0.50	+0.2
6,041,400	+		Psyr_5091	0.50	+0.4
6,041,400	+		Psyr_5091	0.50	-0.1
6,041,400	+		Psyr_5091	0.50	+0.7
6,041,400	+		Psyr_5091	0.50	+0.2
6,041,401	-		Psyr_5091	0.50	+0.1
6,041,401	-		Psyr_5091	0.50	-0.9
6,041,401	-		Psyr_5091	0.50	-0.2
6,041,401	-		Psyr_5091	0.50	+0.4
6,041,401	-		Psyr_5091	0.50	-0.0
6,041,401	-		Psyr_5091	0.50	-0.5
6,041,401	-		Psyr_5091	0.50	-0.1
6,041,401	-		Psyr_5091	0.50	-0.1
6,041,493	+		Psyr_5091	0.55	+0.3
6,041,493	+		Psyr_5091	0.55	+0.4
6,041,494	-		Psyr_5091	0.55	-0.1
6,041,494	-		Psyr_5091	0.55	+0.4