Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3862

Experiment: KB with Chloramphenicol 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Chloramphenicol 12.5 ug/ml
4,600,750	+		Psyr_3860	0.36	-0.1
4,600,752	+		Psyr_3860	0.36	+0.8
4,600,752	+		Psyr_3860	0.36	+0.1
4,600,753	-		Psyr_3860	0.36	+1.1
4,600,819	-		Psyr_3860	0.45	+0.2
4,600,990	+		Psyr_3860	0.67	+0.1
4,600,990	+		Psyr_3860	0.67	+0.6
4,600,991	-		Psyr_3860	0.68	+0.7
4,600,991	-		Psyr_3860	0.68	+1.1
4,600,991	-		Psyr_3860	0.68	-1.6
4,600,991	-		Psyr_3860	0.68	+1.1
4,600,991	-		Psyr_3860	0.68	-1.5
4,601,176	+				+0.7
4,601,176	+				+1.8
4,601,177	-				+0.4
4,601,177	-				-0.2
4,601,230	+				+1.0
4,601,231	-				+0.4
4,601,231	-				+1.6
4,601,475	+		Psyr_3861	0.89	-1.2
4,601,575	-				-1.2
4,601,586	-				+0.8
4,601,626	+				-0.2
4,601,626	+				-0.5
4,601,626	+				+0.5
4,601,626	+				-1.8
4,601,626	+				+0.3
4,601,626	+				+1.0
4,601,626	+				-0.9
4,601,626	+				-0.7
4,601,626	+				-1.2
4,601,626	+				+0.4
4,601,627	-				+0.1
4,601,627	-				-1.6
4,601,627	-				+1.8
4,601,627	-				+1.8
4,601,627	-				+1.1
4,601,627	-				-0.8
4,601,627	-				-0.2
4,601,627	-				-0.4
4,601,627	-				-0.7
4,601,627	-				-0.2
4,601,627	-				-0.6
4,601,627	-				+0.1
4,601,696	-				-0.4
4,601,749	-				+0.4
4,601,749	-				-0.5
4,602,129	+		Psyr_3862	0.81	+0.8
4,602,129	+		Psyr_3862	0.81	-2.3
4,602,133	+		Psyr_3862	0.82	-0.5
4,602,134	-		Psyr_3862	0.82	-0.8
4,602,134	-		Psyr_3862	0.82	-0.4
4,602,148	+		Psyr_3862	0.85	-2.2
4,602,181	+				+0.5
4,602,182	-				-0.2
4,602,182	-				+0.6
4,602,212	-				+0.1
4,602,212	-				+0.3
4,602,212	-				-0.4
4,602,212	-				-0.5
4,602,225	+				+0.4
4,602,225	+				-0.6
4,602,225	+				-2.3
4,602,225	+				+0.4
4,602,225	+				+0.1
4,602,225	+				-0.2
4,602,225	+				-1.2
4,602,225	+				-1.4
4,602,226	-				+0.0
4,602,226	-				-0.7
4,602,226	-				-0.3
4,602,226	-				+1.2
4,602,231	+				+0.2
4,602,338	-		Psyr_3863	0.24	-0.1
4,602,346	+		Psyr_3863	0.25	-0.8
4,602,346	+		Psyr_3863	0.25	+0.1
4,602,347	-		Psyr_3863	0.26	-0.6
4,602,347	-		Psyr_3863	0.26	+0.6
4,602,347	-		Psyr_3863	0.26	-0.5
4,602,381	+		Psyr_3863	0.33	-1.0
4,602,381	+		Psyr_3863	0.33	+0.8
4,602,381	+		Psyr_3863	0.33	-0.4
4,602,382	-		Psyr_3863	0.33	+0.7
4,602,464	+		Psyr_3863	0.50	-0.0
4,602,465	-		Psyr_3863	0.50	-0.2
4,602,465	-		Psyr_3863	0.50	+1.0
4,602,555	+		Psyr_3863	0.69	-1.4
4,602,596	-		Psyr_3863	0.78	-1.0
4,602,596	-		Psyr_3863	0.78	+0.2
4,602,600	+		Psyr_3863	0.79	+1.3
4,602,601	-		Psyr_3863	0.79	-0.2
4,602,634	-		Psyr_3863	0.86	+1.2
4,602,688	+				+0.8
4,602,689	-				+1.2
4,602,689	-				-2.0
4,602,689	-				+0.8
4,602,689	-				+0.0
4,602,689	-				-0.6
4,602,689	-				-0.8
4,602,689	-				-1.8
4,602,689	-				+0.5
4,602,856	-				+0.0
4,603,155	+				-0.4
4,603,155	+				+0.4
4,603,155	+				-0.8
4,603,155	+				-0.2
4,603,155	+				+0.8
4,603,155	+				+0.9
4,603,155	+				+1.1
4,603,155	+				-0.2
4,603,155	+				+1.1
4,603,155	+				-0.9
4,603,155	+				-0.8
4,603,155	+				+0.0
4,603,155	+				-0.7
4,603,155	+				+0.4
4,603,155	+				+0.4