Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3002

Experiment: KB with Chloramphenicol 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Chloramphenicol 12.5 ug/ml
3,596,843	+		Psyr_3000	0.55	-0.8
3,596,847	-		Psyr_3000	0.56	-0.9
3,597,134	-				+1.1
3,597,134	-				+1.7
3,597,134	-				+0.0
3,597,359	+		Psyr_3001	0.41	+0.4
3,597,489	+		Psyr_3001	0.61	+0.5
3,597,490	-		Psyr_3001	0.61	+1.6
3,597,564	+		Psyr_3001	0.72	+0.1
3,597,564	+		Psyr_3001	0.72	-0.9
3,597,564	+		Psyr_3001	0.72	-0.7
3,597,564	+		Psyr_3001	0.72	+0.1
3,597,565	-		Psyr_3001	0.72	-0.3
3,597,565	-		Psyr_3001	0.72	-0.1
3,597,758	-				+0.7
3,597,964	-		Psyr_3002	0.20	+1.8
3,597,970	+		Psyr_3002	0.21	-0.3
3,598,051	+		Psyr_3002	0.28	+1.0
3,598,051	+		Psyr_3002	0.28	-0.2
3,598,051	+		Psyr_3002	0.28	-1.8
3,598,051	+				-0.3
3,598,052	-		Psyr_3002	0.28	-0.2
3,598,232	-		Psyr_3002	0.46	-0.1
3,598,329	+		Psyr_3002	0.55	-0.9
3,598,329	+		Psyr_3002	0.55	+1.1
3,598,329	+		Psyr_3002	0.55	-0.3
3,598,329	+		Psyr_3002	0.55	-0.3
3,598,329	+		Psyr_3002	0.55	+1.9
3,598,330	-		Psyr_3002	0.55	+1.9
3,598,330	-		Psyr_3002	0.55	-0.9
3,598,330	-		Psyr_3002	0.55	+1.3
3,598,330	-		Psyr_3002	0.55	+0.2
3,598,400	-		Psyr_3002	0.62	-0.7
3,598,575	-		Psyr_3002	0.79	+0.2
3,598,791	+				-0.9
3,598,791	+				+0.0
3,598,791	+				-0.7
3,598,791	+				-0.5
3,598,792	-				+0.4
3,598,792	-				+0.3
3,598,792	-				+0.8
3,598,792	-				+1.0
3,598,894	+				+0.9
3,598,894	+				-1.0
3,598,894	+				-1.8
3,598,894	+				+0.4
3,598,894	+				+0.7
3,598,895	-				-0.3
3,598,895	-				-0.6
3,598,895	-				-0.1
3,598,915	+				+0.9
3,598,915	+				+0.7
3,598,915	+				-2.1
3,598,916	-				+0.7
3,598,966	+				-0.3
3,599,009	+				+0.4
3,599,010	-				-0.3
3,599,035	+				+0.1
3,599,055	+				-0.3
3,599,055	+				-0.5
3,599,148	-				-0.2
3,599,148	-				-0.7
3,599,201	+				-0.8
3,599,201	+				-0.0
3,599,201	+				+0.2
3,599,201	+				+0.1
3,599,201	+				+0.7
3,599,201	+				+0.7
3,599,202	-				-0.5
3,599,202	-				+0.1
3,599,202	-				-0.1
3,599,246	+		Psyr_3003	0.12	+0.2
3,599,247	-		Psyr_3003	0.12	+0.4
3,599,247	-		Psyr_3003	0.12	-0.5
3,599,329	+		Psyr_3003	0.26	+1.2
3,599,330	-		Psyr_3003	0.26	+0.3
3,599,495	+		Psyr_3003	0.53	+1.3
3,599,495	+		Psyr_3003	0.53	-0.3
3,599,495	+		Psyr_3003	0.53	-0.6
3,599,495	+		Psyr_3003	0.53	+0.2
3,599,495	+		Psyr_3003	0.53	-0.1
3,599,495	+		Psyr_3003	0.53	-0.7
3,599,495	+		Psyr_3003	0.53	+0.9
3,599,495	+		Psyr_3003	0.53	+0.5
3,599,496	-		Psyr_3003	0.53	+0.7
3,599,496	-		Psyr_3003	0.53	+0.4
3,599,496	-		Psyr_3003	0.53	+0.4
3,599,496	-		Psyr_3003	0.53	-0.6
3,599,496	-		Psyr_3003	0.53	+1.2
3,599,496	-		Psyr_3003	0.53	+0.7
3,599,699	+		Psyr_3003	0.86	-0.7
3,599,699	+		Psyr_3003	0.86	-0.6
3,599,699	+		Psyr_3003	0.86	-0.9
3,599,773	+				-0.0
3,599,773	+				-2.1
3,599,773	+				-0.8
3,599,773	+				+0.7
3,599,773	+				-0.1
3,599,773	+				-0.7
3,599,774	-				-0.9
3,599,774	-				-0.7
3,599,774	-				-0.7
3,599,774	-				-0.2
3,599,774	-				+0.4
3,599,774	-				+0.4
3,599,781	+				+1.7
3,599,786	+				+0.1
3,599,786	+				-0.2
3,599,786	+				+0.2
3,599,786	+				-1.4
3,599,787	-				+0.4
3,599,787	-				+0.7
3,599,787	-				-1.1
3,599,787	-				-0.3