Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2546

Experiment: KB with Chloramphenicol 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Chloramphenicol 12.5 ug/ml
2,960,224	+				+0.6
2,960,224	+				-1.0
2,960,225	-				+0.6
2,960,225	-				+0.6
2,960,225	-				-1.3
2,960,271	-				-1.2
2,960,294	+				+0.2
2,960,440	+		Psyr_2545	0.22	+0.1
2,960,548	+		Psyr_2545	0.36	+0.6
2,960,548	+		Psyr_2545	0.36	-2.0
2,960,549	-		Psyr_2545	0.36	-0.6
2,960,756	-		Psyr_2545	0.62	-0.7
2,960,844	+		Psyr_2545	0.73	-0.9
2,960,845	-		Psyr_2545	0.73	-0.4
2,960,845	-		Psyr_2545	0.73	-1.1
2,960,889	+		Psyr_2545	0.78	+2.9
2,960,953	+		Psyr_2545	0.86	+0.3
2,960,953	+		Psyr_2545	0.86	-1.0
2,960,953	+		Psyr_2545	0.86	+0.6
2,960,953	+		Psyr_2545	0.86	+0.0
2,960,953	+		Psyr_2545	0.86	-0.1
2,960,953	+		Psyr_2545	0.86	+1.6
2,961,184	-		Psyr_2546	0.26	-1.0
2,961,300	+		Psyr_2546	0.59	-0.7
2,961,372	-		Psyr_2546	0.79	-1.0
2,961,408	+		Psyr_2546	0.89	-0.7
2,961,409	-		Psyr_2546	0.89	-0.4
2,961,416	+				+1.3
2,961,417	-				+0.1
2,961,622	+		Psyr_2547	0.14	+0.9
2,961,623	-		Psyr_2547	0.15	-0.1
2,961,623	-		Psyr_2547	0.15	-0.5
2,961,793	-		Psyr_2547	0.29	-0.4
2,961,890	-		Psyr_2547	0.37	+1.2
2,961,910	-		Psyr_2547	0.39	-0.8
2,961,910	-		Psyr_2547	0.39	+0.4
2,962,253	+		Psyr_2547	0.67	-2.9
2,962,254	-		Psyr_2547	0.67	-0.3
2,962,254	-		Psyr_2547	0.67	-1.2
2,962,266	+		Psyr_2547	0.68	+0.7
2,962,269	+		Psyr_2547	0.69	-0.4
2,962,270	-		Psyr_2547	0.69	-0.9
2,962,270	-		Psyr_2547	0.69	-0.1
2,962,270	-		Psyr_2547	0.69	-0.3
2,962,314	+		Psyr_2547	0.72	+1.6
2,962,315	-		Psyr_2547	0.73	-0.1
2,962,315	-		Psyr_2547	0.73	+0.3
2,962,444	-		Psyr_2547	0.83	-0.2
2,962,444	-		Psyr_2547	0.83	+0.3