Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1821

Experiment: KB with Chloramphenicol 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Chloramphenicol 12.5 ug/ml
2,099,951	-		Psyr_1820	0.24	+0.2
2,100,267	+		Psyr_1820	0.51	-2.1
2,100,268	-		Psyr_1820	0.51	-0.1
2,100,268	-		Psyr_1820	0.51	+1.3
2,100,327	-		Psyr_1820	0.56	+1.0
2,100,327	-		Psyr_1820	0.56	-1.3
2,100,327	-		Psyr_1820	0.56	+0.0
2,100,330	-		Psyr_1820	0.56	+1.9
2,100,330	-		Psyr_1820	0.56	-1.9
2,100,405	-		Psyr_1820	0.63	+0.4
2,100,429	-		Psyr_1820	0.65	-0.3
2,100,429	-		Psyr_1820	0.65	-0.7
2,100,524	+		Psyr_1820	0.73	+0.2
2,100,975	+		Psyr_1821	0.16	-1.2
2,100,975	+		Psyr_1821	0.16	-0.2
2,100,975	+		Psyr_1821	0.16	-2.5
2,100,976	-		Psyr_1821	0.17	-0.9
2,100,976	-		Psyr_1821	0.17	+0.2
2,100,976	-		Psyr_1821	0.17	-0.2
2,100,977	+		Psyr_1821	0.17	-0.5
2,100,978	-		Psyr_1821	0.17	-0.7
2,101,263	+		Psyr_1821	0.75	-0.2
2,101,277	+		Psyr_1821	0.78	-0.0
2,101,278	-		Psyr_1821	0.78	-1.8
2,101,278	-		Psyr_1821	0.78	+0.7
2,101,297	+		Psyr_1821	0.82	-0.4
2,101,297	+		Psyr_1821	0.82	-0.3
2,101,298	-		Psyr_1821	0.82	-0.1
2,101,298	-		Psyr_1821	0.82	-0.7
2,101,298	-		Psyr_1821	0.82	-1.5
2,101,298	-		Psyr_1821	0.82	-0.7
2,101,312	-		Psyr_1821	0.85	+2.0
2,101,764	-				-0.9
2,101,773	+				-0.9
2,101,812	+				+1.5
2,101,812	+				-2.1
2,101,812	+				+0.3
2,101,812	+				+0.7
2,101,813	-				-0.6
2,101,873	-				-0.2
2,101,873	-				-2.5
2,101,873	-				+0.1
2,101,930	-				+0.2
2,102,219	-		Psyr_1822	0.16	+0.4
2,102,219	-		Psyr_1822	0.16	-1.2
2,102,219	-		Psyr_1822	0.16	-1.2
2,102,250	+		Psyr_1822	0.19	-0.1
2,102,250	+		Psyr_1822	0.19	+0.7
2,102,250	+		Psyr_1822	0.19	-0.3
2,102,251	-		Psyr_1822	0.19	+1.6
2,102,253	+		Psyr_1822	0.19	-0.1
2,102,253	+		Psyr_1822	0.19	-1.3
2,102,254	-		Psyr_1822	0.19	+0.1
2,102,254	-		Psyr_1822	0.19	+0.7
2,102,254	-		Psyr_1822	0.19	+0.1
2,102,254	-		Psyr_1822	0.19	-1.2
2,102,254	-		Psyr_1822	0.19	+0.5
2,102,254	-		Psyr_1822	0.19	+0.9
2,102,254	-		Psyr_1822	0.19	-0.5