Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1770

Experiment: KB with Chloramphenicol 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Chloramphenicol 12.5 ug/ml
2,013,388	-		Psyr_1769	0.31	-0.3
2,013,749	+		Psyr_1769	0.62	+0.2
2,013,749	+		Psyr_1769	0.62	+0.4
2,013,749	+		Psyr_1769	0.62	+0.2
2,013,750	-		Psyr_1769	0.63	+0.2
2,013,877	-		Psyr_1769	0.74	+0.7
2,013,877	-		Psyr_1769	0.74	+0.3
2,013,877	-		Psyr_1769	0.74	-0.1
2,013,981	+		Psyr_1769	0.83	-0.5
2,013,982	-		Psyr_1769	0.83	-1.9
2,013,990	+		Psyr_1769	0.83	-0.1
2,013,990	+		Psyr_1769	0.83	-0.8
2,013,990	+		Psyr_1769	0.83	+1.2
2,013,990	+		Psyr_1769	0.83	+0.2
2,013,990	+		Psyr_1769	0.83	+0.2
2,013,990	+		Psyr_1769	0.83	-1.0
2,013,991	-		Psyr_1769	0.84	-1.1
2,013,991	-		Psyr_1769	0.84	+1.0
2,013,991	-		Psyr_1769	0.84	+1.7
2,013,991	-		Psyr_1769	0.84	+0.7
2,013,991	-		Psyr_1769	0.84	+0.5
2,013,991	-		Psyr_1769	0.84	-0.2
2,013,991	-		Psyr_1769	0.84	+0.5
2,013,991	-		Psyr_1769	0.84	+0.7
2,014,148	+				+1.1
2,014,292	+				+0.1
2,014,292	+				-1.1
2,014,292	+				+1.2
2,014,292	+				-0.3
2,014,293	-				-0.9
2,014,293	-				-0.0
2,014,293	-				+1.0
2,014,293	-				-0.9
2,014,293	-				+0.0
2,014,293	-				+0.3
2,014,710	+		Psyr_1770	0.48	+0.5
2,014,711	-		Psyr_1770	0.48	+1.5
2,014,711	-		Psyr_1770	0.48	+0.4
2,014,711	-		Psyr_1770	0.48	+0.2
2,014,711	-		Psyr_1770	0.48	+0.5
2,014,711	-		Psyr_1770	0.48	-0.7
2,014,971	+		Psyr_1770	0.72	+0.6
2,014,972	-		Psyr_1770	0.72	+0.9
2,015,025	+		Psyr_1770	0.77	-0.9
2,015,026	-		Psyr_1770	0.77	+1.2
2,015,314	+				+1.5
2,015,378	+				+0.7
2,015,384	+				-1.6
2,015,402	-				+1.7
2,015,412	+				-0.2
2,015,483	+				-0.3
2,015,483	+				+0.4
2,015,486	+				+0.1
2,015,486	+				-0.3
2,015,486	+				-0.2
2,015,487	-				-0.3
2,015,487	-				+0.1
2,015,487	-				-1.9
2,015,487	-				-1.3
2,015,487	-				-0.8
2,015,487	-				+0.1
2,015,498	+				+0.1
2,015,498	+				-0.2
2,015,527	+				-0.1
2,015,528	-				+0.0
2,015,528	-				-0.5
2,015,558	-				-0.3
2,015,566	+				-1.3
2,015,566	+				-1.6
2,015,566	+				+0.8
2,015,567	-				-0.3
2,015,570	+				+0.0
2,015,570	+				-0.6
2,015,570	+				-1.9
2,015,570	+				-1.3
2,015,570	+				-0.6
2,015,570	+				+1.7
2,015,570	+				-1.6
2,015,570	+				-2.6
2,015,570	+				-0.6
2,015,570	+				-1.6
2,015,570	+				-0.1
2,015,570	+				-0.8
2,015,571	-				+1.1
2,015,571	-				-0.3
2,015,571	-				+0.0
2,015,571	-				-1.9
2,015,704	+				+0.9
2,015,789	+		Psyr_1771	0.14	-1.4
2,015,789	+		Psyr_1771	0.14	-1.0
2,015,789	+		Psyr_1771	0.14	+1.9
2,015,789	+		Psyr_1771	0.14	-1.5
2,015,790	-		Psyr_1771	0.14	+1.9
2,015,790	-		Psyr_1771	0.14	+0.7
2,015,801	-		Psyr_1771	0.14	-0.4
2,015,882	+		Psyr_1771	0.19	+0.0
2,015,940	+		Psyr_1771	0.23	-0.3
2,015,940	+		Psyr_1771	0.23	-0.5
2,015,991	-		Psyr_1771	0.26	+0.5
2,015,991	-		Psyr_1771	0.26	-0.4
2,015,993	+		Psyr_1771	0.26	-1.1
2,015,993	+		Psyr_1771	0.26	-0.6
2,015,993	+		Psyr_1771	0.26	+1.0
2,015,993	+		Psyr_1771	0.26	-0.9
2,015,993	+		Psyr_1771	0.26	-0.5
2,015,993	+		Psyr_1771	0.26	+0.7
2,015,993	+		Psyr_1771	0.26	+0.1
2,015,993	+		Psyr_1771	0.26	-0.5
2,015,993	+		Psyr_1771	0.26	-0.5
2,015,993	+		Psyr_1771	0.26	-0.1
2,015,993	+		Psyr_1771	0.26	-0.9
2,015,994	-		Psyr_1771	0.26	-0.3
2,015,994	-		Psyr_1771	0.26	-0.5
2,015,994	-		Psyr_1771	0.26	-0.3
2,015,994	-		Psyr_1771	0.26	-1.9
2,015,994	-		Psyr_1771	0.26	-0.3
2,015,994	-		Psyr_1771	0.26	+0.7
2,015,994	-		Psyr_1771	0.26	-0.3
2,015,994	-		Psyr_1771	0.26	-0.9
2,015,994	-		Psyr_1771	0.26	-0.7
2,015,994	-		Psyr_1771	0.26	+0.2
2,016,129	-		Psyr_1771	0.34	+1.0
2,016,129	-				+0.7