Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0134

Experiment: KB with Chloramphenicol 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Chloramphenicol 12.5 ug/ml
141,071	+		Psyr_0133	0.80	-0.1
141,190	+				+0.6
141,190	+				+1.4
141,191	-				+0.1
141,191	-				+2.1
141,191	-				+0.1
141,191	-				+0.3
141,191	-				+0.1
141,191	-				+0.7
141,191	-				-0.5
141,191	-				+1.3
141,233	-				-0.1
141,233	-				+0.4
141,233	-				+0.3
141,233	-				+0.5
141,233	-				-0.2
141,561	-				-0.4
141,561	-				-0.3
141,813	+				+0.4
141,813	+				-0.1
141,813	+				+0.7
141,813	+				+1.7
141,814	-				+1.8
141,814	-				+0.8
141,814	-				+0.2
141,814	-				+0.2
141,826	+				-0.2
141,881	-				+0.1
141,948	+				+0.8
141,949	-				-1.2
141,952	+				+0.2
141,952	+				-0.0
141,953	-				+0.5
141,980	+				-0.4
141,981	-				-0.9
141,981	-				+1.4
142,033	-				+0.3
142,033	-				-0.0
142,067	+				-1.5
142,067	+				-1.0
142,076	+				-1.1
142,077	-				+0.6
142,077	-				-0.8
142,689	+		Psyr_0134	0.57	+0.2
142,690	-		Psyr_0134	0.57	-0.5
142,700	+		Psyr_0134	0.58	+1.5
142,700	+		Psyr_0134	0.58	-0.2
142,700	+		Psyr_0134	0.58	-0.4
142,700	+		Psyr_0134	0.58	+0.2
142,700	+		Psyr_0134	0.58	-1.1
142,700	+		Psyr_0134	0.58	+0.1
142,700	+		Psyr_0134	0.58	-0.7
142,701	-		Psyr_0134	0.58	-2.0
142,701	-		Psyr_0134	0.58	-1.8
142,701	-		Psyr_0134	0.58	-0.5
142,701	-		Psyr_0134	0.58	-0.5
143,201	+				-0.6
143,202	-				-0.7
143,215	+				-0.3
143,215	+				+0.7
143,216	-				+1.2
143,340	-				-0.4
143,340	-				+0.1
143,403	-				+0.3
143,437	+				-0.8
143,437	+				-0.5
143,438	-				+0.1
143,532	+				+0.7
143,532	+				-1.0
143,532	+				+0.4
143,532	+				-0.9
143,532	+				-0.2
143,533	-				+1.1
143,533	-				+0.8
143,533	-				-0.4
143,533	-				+2.7
143,533	-				+1.0
143,533	-				+0.3
143,655	-				-0.0
143,681	+				-0.4
143,682	-				-0.9
143,682	-				-0.1
143,682	-				-0.4
143,753	+				-0.2
143,754	-				-1.1
143,754	-				+0.5
143,754	-				-0.2
143,754	-				-1.4
143,754	-				+0.8
143,775	+				-0.1
143,791	+				-0.7
143,791	+				-1.3
143,905	+				+0.1
143,906	-				+0.6
143,906	-				+0.5
144,055	+				-0.4
144,109	-				+0.1
144,109	-				+0.6
144,175	+				+1.3
144,175	+				-1.2
144,175	+				+1.1
144,175	+				+0.1
144,175	+				+2.1
144,175	+				-0.0
144,176	-				+1.5
144,176	-				-0.1
144,176	-				+0.8
144,176	-				-0.1
144,176	-				-1.2
144,176	-				+0.3
144,176	-				+1.1