Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1118

Experiment: pyruvate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyruvate (C)
1,252,248	-				-0.3
1,252,300	+		Pf1N1B4_1117	0.12	+0.3
1,252,300	+		Pf1N1B4_1117	0.12	-0.5
1,252,300	+		Pf1N1B4_1117	0.12	+0.6
1,252,301	-		Pf1N1B4_1117	0.13	-0.1
1,252,301	-		Pf1N1B4_1117	0.13	-0.1
1,252,301	-		Pf1N1B4_1117	0.13	-0.7
1,252,301	-		Pf1N1B4_1117	0.13	-0.1
1,252,301	-		Pf1N1B4_1117	0.13	-0.0
1,252,301	-		Pf1N1B4_1117	0.13	+0.5
1,252,369	+		Pf1N1B4_1117	0.22	+0.3
1,252,370	-		Pf1N1B4_1117	0.22	+0.0
1,252,504	+		Pf1N1B4_1117	0.41	-0.5
1,252,504	+		Pf1N1B4_1117	0.41	-0.5
1,252,505	-		Pf1N1B4_1117	0.41	+0.3
1,252,505	-		Pf1N1B4_1117	0.41	-0.3
1,252,505	-				+0.5
1,252,505	-		Pf1N1B4_1117	0.41	+0.8
1,252,751	-		Pf1N1B4_1117	0.75	-1.0
1,252,751	-		Pf1N1B4_1117	0.75	-0.7
1,252,798	+		Pf1N1B4_1117	0.82	+2.9
1,252,798	+		Pf1N1B4_1117	0.82	+0.4
1,252,798	+		Pf1N1B4_1117	0.82	-0.4
1,252,798	+		Pf1N1B4_1117	0.82	+0.1
1,252,799	-		Pf1N1B4_1117	0.82	+0.5
1,252,799	-		Pf1N1B4_1117	0.82	-0.1
1,252,799	-		Pf1N1B4_1117	0.82	-1.8
1,252,799	-		Pf1N1B4_1117	0.82	+0.1
1,252,799	-		Pf1N1B4_1117	0.82	+1.5
1,252,799	-		Pf1N1B4_1117	0.82	-0.6
1,252,799	-		Pf1N1B4_1117	0.82	+1.2
1,252,799	-		Pf1N1B4_1117	0.82	+1.5
1,252,799	-		Pf1N1B4_1117	0.82	-1.1
1,252,936	-				-0.4
1,252,963	+				+0.2
1,252,963	+				+0.2
1,252,963	+				-0.3
1,252,964	-				+0.3
1,252,964	-				+0.1
1,252,964	-				-0.4
1,253,169	+				+1.5
1,253,169	+				+0.8
1,253,169	+				-0.6
1,253,219	+				+0.7
1,253,219	+				-0.5
1,253,219	+				+0.2
1,253,219	+				+1.2
1,253,220	-				+0.5
1,253,220	-				-0.4
1,253,220	-				-0.5
1,253,220	-				-1.6
1,253,220	-				-1.2
1,253,220	-				-0.5
1,253,220	-				-0.5
1,253,220	-				-1.4
1,253,230	+				-0.8
1,253,230	+				-0.2
1,253,230	+				-2.9
1,253,230	+				-0.1
1,253,230	+				+0.5
1,253,230	+				-0.5
1,253,230	+				-0.7
1,253,230	+				+0.2
1,253,230	+				+0.9
1,253,230	+				-0.3
1,253,231	-				+0.5
1,253,231	-				-0.1
1,253,231	-				+1.5
1,253,231	-				-2.6
1,253,231	-				+0.8
1,253,231	-				-0.1
1,253,231	-				-1.1
1,253,231	-				-0.4
1,253,231	-				-0.1
1,253,231	-				+1.5
1,253,231	-				-1.0
1,253,231	-				+0.8
1,253,231	-				+0.5
1,253,231	-				+0.8
1,253,231	-				+1.0
1,253,298	+		Pf1N1B4_1118	0.44	-0.1
1,253,298	+		Pf1N1B4_1118	0.44	-0.7
1,253,299	-		Pf1N1B4_1118	0.44	-1.1
1,253,299	-		Pf1N1B4_1118	0.44	-0.7
1,253,299	-		Pf1N1B4_1118	0.44	-0.5
1,253,299	-		Pf1N1B4_1118	0.44	-1.8
1,253,299	-		Pf1N1B4_1118	0.44	+1.1
1,253,299	-		Pf1N1B4_1118	0.44	+0.2
1,253,414	+				+1.5
1,253,414	+				-0.6
1,253,415	-				-0.2
1,253,415	-				+0.7
1,253,415	-				+0.2
1,253,415	-				+0.2
1,253,415	-				-1.1
1,253,416	+				+0.9
1,253,416	+				+0.2
1,253,416	+				+0.8
1,253,416	+				+0.6
1,253,416	+				+1.0
1,253,416	+				-0.2
1,253,416	+				+0.2
1,253,416	+				-2.0
1,253,416	+				-0.5
1,253,416	+				+0.9
1,253,416	+				+0.8
1,253,416	+				+0.5
1,253,416	+				-0.3
1,253,416	+				-0.2
1,253,416	+				+1.5
1,253,416	+				-1.1
1,253,416	+				+0.5
1,253,416	+				+1.2
1,253,416	+				-0.5
1,253,416	+				+1.5
1,253,416	+				-0.1
1,253,416	+				-0.3
1,253,416	+				+0.1
1,253,416	+				-0.8
1,253,416	+				-0.5
1,253,416	+				-0.8
1,253,416	+				-0.5
1,253,417	-				+0.4
1,253,417	-				-1.2
1,253,417	-				+0.7
1,253,417	-				-1.0
1,253,417	-				-1.7
1,253,417	-				-0.4
1,253,417	-				-0.7
1,253,417	-				-1.2
1,253,417	-				+0.4
1,253,417	-				+0.9
1,253,417	-				+0.3
1,253,417	-				+0.6
1,253,417	-				+0.5
1,253,417	-				+0.5
1,253,417	-				-1.5
1,253,417	-				+1.5
1,253,417	-				-0.0
1,253,417	-				-2.0
1,253,417	-				+0.3
1,253,417	-				+0.3
1,253,417	-				-0.5
1,253,417	-				-0.8
1,253,469	+				-1.5
1,253,469	+				-0.6
1,253,470	-				+0.9
1,253,472	+				+0.9
1,253,489	+				-0.5
1,253,506	+				+0.4
1,253,506	+				+2.2
1,253,506	+				+1.1
1,253,506	+				-1.5
1,253,506	+				-0.5
1,253,506	+				-1.1
1,253,507	-				+0.7
1,253,507	-				+1.8
1,253,507	-				-0.6
1,253,510	+				-1.3
1,253,510	+				-0.1
1,253,510	+				-0.4
1,253,510	+				+0.3
1,253,510	+				-1.0
1,253,510	+				+0.8
1,253,510	+				+0.6
1,253,510	+				-1.3
1,253,511	-				-0.1
1,253,511	-				-1.1
1,253,511	-				+0.5
1,253,511	-				-1.1
1,253,511	-				+0.7
1,253,572	+				-1.1
1,253,573	-				+0.1
1,253,573	-				-0.5
1,253,577	+				+0.3
1,253,577	+				+0.0
1,253,577	+				+0.5
1,253,577	+				+0.3
1,253,578	-				-0.2
1,253,647	+				-1.3
1,253,647	+				+0.5
1,253,647	+				+1.9
1,253,647	+				-0.1
1,253,648	-				+1.5
1,253,648	-				+0.8
1,253,648	-				+1.1
1,253,648	-				-0.2
1,253,648	-				-1.3
1,253,648	-				+1.3
1,253,648	-				+1.8
1,253,753	+				+0.1
1,253,753	+				+0.1
1,253,753	+				-0.5
1,253,754	-				+0.1
1,253,836	-				-0.5
1,253,836	-				+0.5
1,253,836	-				-0.1
1,253,894	+				-1.4
1,253,894	+				-1.3
1,253,895	-				-1.1
1,253,895	-				-1.5
1,253,895	-				-0.1
1,253,895	-				+1.2
1,253,957	+				+0.7
1,253,967	+				+2.2
1,253,968	-				-0.3
1,253,968	-				-0.1
1,253,968	-				-0.5
1,253,982	+				+1.0
1,253,993	-				+0.5
1,254,108	-				+0.5
1,254,108	-				-0.6
1,254,165	+				-1.8
1,254,166	-				-0.3
1,254,166	-				-0.8
1,254,208	-				+0.6
1,254,208	-				+0.3
1,254,340	-		Pf1N1B4_1119	0.17	-1.5
1,254,340	-		Pf1N1B4_1119	0.17	+0.8
1,254,340	-		Pf1N1B4_1119	0.17	-1.1
1,254,385	-		Pf1N1B4_1119	0.20	+0.5
1,254,385	-		Pf1N1B4_1119	0.20	+0.9
1,254,385	-		Pf1N1B4_1119	0.20	+0.6