Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_02075 and AO356_02080 are separated by 5 nucleotides AO356_02080 and AO356_02085 overlap by 4 nucleotides AO356_02085 and AO356_02090 are separated by 51 nucleotides
AO356_02075: AO356_02075 - phage tail protein, at 451,876 to 454,821
_02075
AO356_02080: AO356_02080 - oxidoreductase, at 454,827 to 455,267
_02080
AO356_02085: AO356_02085 - late control protein, at 455,264 to 456,523
_02085
AO356_02090: AO356_02090 - hypothetical protein, at 456,575 to 457,948
_02090
Position (kb) 455
456
457 Strain fitness (log2 ratio) -2
-1
0
1
2 at 454.265 kb on + strand, within AO356_02075 at 454.310 kb on + strand, within AO356_02075 at 454.691 kb on - strand at 454.875 kb on + strand, within AO356_02080 at 455.094 kb on + strand, within AO356_02080 at 455.564 kb on + strand, within AO356_02085 at 455.564 kb on + strand, within AO356_02085 at 455.565 kb on - strand, within AO356_02085 at 455.565 kb on - strand, within AO356_02085 at 455.565 kb on - strand, within AO356_02085 at 455.587 kb on + strand, within AO356_02085 at 455.588 kb on - strand, within AO356_02085 at 455.588 kb on - strand, within AO356_02085 at 455.588 kb on - strand, within AO356_02085 at 455.588 kb on - strand, within AO356_02085 at 455.734 kb on + strand, within AO356_02085 at 455.735 kb on - strand, within AO356_02085 at 455.762 kb on - strand, within AO356_02085 at 455.814 kb on + strand, within AO356_02085 at 455.914 kb on + strand, within AO356_02085 at 455.914 kb on + strand, within AO356_02085 at 455.914 kb on + strand, within AO356_02085 at 455.914 kb on + strand, within AO356_02085 at 455.914 kb on + strand, within AO356_02085 at 455.914 kb on + strand, within AO356_02085 at 455.914 kb on + strand, within AO356_02085 at 455.915 kb on - strand, within AO356_02085 at 455.915 kb on - strand, within AO356_02085 at 455.915 kb on - strand, within AO356_02085 at 455.915 kb on - strand, within AO356_02085 at 455.916 kb on + strand, within AO356_02085 at 455.917 kb on - strand, within AO356_02085 at 455.917 kb on - strand, within AO356_02085 at 455.917 kb on - strand, within AO356_02085 at 455.917 kb on - strand, within AO356_02085 at 455.975 kb on + strand, within AO356_02085 at 455.975 kb on + strand, within AO356_02085 at 455.976 kb on - strand, within AO356_02085 at 455.976 kb on - strand, within AO356_02085 at 455.976 kb on - strand, within AO356_02085 at 456.070 kb on + strand, within AO356_02085 at 456.152 kb on + strand, within AO356_02085 at 456.152 kb on + strand, within AO356_02085 at 456.152 kb on + strand, within AO356_02085 at 456.152 kb on + strand, within AO356_02085 at 456.153 kb on - strand, within AO356_02085 at 456.153 kb on - strand, within AO356_02085 at 456.153 kb on - strand, within AO356_02085 at 456.153 kb on - strand, within AO356_02085 at 456.197 kb on + strand, within AO356_02085 at 456.198 kb on - strand, within AO356_02085 at 456.198 kb on - strand, within AO356_02085 at 456.284 kb on + strand, within AO356_02085 at 456.284 kb on + strand, within AO356_02085 at 456.285 kb on - strand, within AO356_02085 at 456.363 kb on - strand, within AO356_02085 at 456.437 kb on - strand at 456.461 kb on + strand at 456.461 kb on + strand at 456.461 kb on + strand at 456.461 kb on + strand at 456.462 kb on - strand at 456.462 kb on - strand at 456.462 kb on - strand at 456.528 kb on + strand at 456.555 kb on + strand at 456.555 kb on + strand at 456.555 kb on + strand at 456.555 kb on + strand at 456.620 kb on + strand at 456.621 kb on - strand at 456.659 kb on - strand at 456.674 kb on - strand at 456.690 kb on + strand at 456.691 kb on - strand at 456.773 kb on + strand, within AO356_02090 at 456.794 kb on - strand, within AO356_02090 at 457.147 kb on - strand, within AO356_02090 at 457.284 kb on + strand, within AO356_02090 at 457.345 kb on + strand, within AO356_02090 at 457.419 kb on - strand, within AO356_02090 at 457.419 kb on - strand, within AO356_02090 at 457.462 kb on + strand, within AO356_02090 at 457.506 kb on + strand, within AO356_02090 at 457.506 kb on + strand, within AO356_02090 at 457.506 kb on + strand, within AO356_02090 at 457.506 kb on + strand, within AO356_02090 at 457.508 kb on + strand, within AO356_02090 at 457.509 kb on - strand, within AO356_02090 at 457.509 kb on - strand, within AO356_02090 at 457.520 kb on - strand, within AO356_02090
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 454,265 + AO356_02075 0.81 -2.0 454,310 + AO356_02075 0.83 -0.1 454,691 - +0.9 454,875 + AO356_02080 0.11 -0.5 455,094 + AO356_02080 0.61 +0.4 455,564 + AO356_02085 0.24 -0.2 455,564 + AO356_02085 0.24 +0.7 455,565 - AO356_02085 0.24 -0.1 455,565 - AO356_02085 0.24 +0.1 455,565 - AO356_02085 0.24 -0.5 455,587 + AO356_02085 0.26 +0.1 455,588 - AO356_02085 0.26 -1.6 455,588 - AO356_02085 0.26 -0.6 455,588 - AO356_02085 0.26 +0.3 455,588 - AO356_02085 0.26 -0.2 455,734 + AO356_02085 0.37 -0.8 455,735 - AO356_02085 0.37 -0.5 455,762 - AO356_02085 0.40 -1.1 455,814 + AO356_02085 0.44 +0.5 455,914 + AO356_02085 0.52 +0.3 455,914 + AO356_02085 0.52 +0.0 455,914 + AO356_02085 0.52 -0.0 455,914 + AO356_02085 0.52 -0.7 455,914 + AO356_02085 0.52 +0.9 455,914 + AO356_02085 0.52 -0.4 455,914 + AO356_02085 0.52 +0.8 455,915 - AO356_02085 0.52 +0.3 455,915 - AO356_02085 0.52 +0.6 455,915 - AO356_02085 0.52 -1.7 455,915 - AO356_02085 0.52 -0.0 455,916 + AO356_02085 0.52 -0.3 455,917 - AO356_02085 0.52 -0.3 455,917 - AO356_02085 0.52 -0.5 455,917 - AO356_02085 0.52 -1.0 455,917 - AO356_02085 0.52 -0.3 455,975 + AO356_02085 0.56 -0.7 455,975 + AO356_02085 0.56 -0.5 455,976 - AO356_02085 0.57 +0.0 455,976 - AO356_02085 0.57 +0.2 455,976 - AO356_02085 0.57 +0.3 456,070 + AO356_02085 0.64 +0.1 456,152 + AO356_02085 0.70 +0.2 456,152 + AO356_02085 0.70 -1.3 456,152 + AO356_02085 0.70 -0.3 456,152 + AO356_02085 0.70 +0.3 456,153 - AO356_02085 0.71 -0.4 456,153 - AO356_02085 0.71 -0.8 456,153 - AO356_02085 0.71 +1.3 456,153 - AO356_02085 0.71 -0.7 456,197 + AO356_02085 0.74 +0.3 456,198 - AO356_02085 0.74 -0.9 456,198 - AO356_02085 0.74 -0.4 456,284 + AO356_02085 0.81 -0.4 456,284 + AO356_02085 0.81 +0.3 456,285 - AO356_02085 0.81 -0.1 456,363 - AO356_02085 0.87 -0.7 456,437 - +0.4 456,461 + +0.3 456,461 + +1.1 456,461 + +0.1 456,461 + -0.8 456,462 - +0.2 456,462 - +0.1 456,462 - +0.3 456,528 + -0.2 456,555 + +1.3 456,555 + +0.1 456,555 + -0.7 456,555 + +0.1 456,620 + +0.3 456,621 - +1.0 456,659 - +0.3 456,674 - +0.0 456,690 + -0.3 456,691 - +0.9 456,773 + AO356_02090 0.14 -1.3 456,794 - AO356_02090 0.16 -0.3 457,147 - AO356_02090 0.42 +0.7 457,284 + AO356_02090 0.52 -0.7 457,345 + AO356_02090 0.56 -0.7 457,419 - AO356_02090 0.61 +0.3 457,419 - AO356_02090 0.61 +0.7 457,462 + AO356_02090 0.65 -1.1 457,506 + AO356_02090 0.68 +0.1 457,506 + AO356_02090 0.68 -1.7 457,506 + AO356_02090 0.68 +0.6 457,506 + AO356_02090 0.68 +0.3 457,508 + AO356_02090 0.68 -1.5 457,509 - AO356_02090 0.68 +0.2 457,509 - AO356_02090 0.68 +2.1 457,520 - AO356_02090 0.69 +0.6
Or see this region's nucleotide sequence