Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS01455 and ABIE51_RS01460 are separated by 306 nucleotides ABIE51_RS01460 and ABIE51_RS01465 are separated by 98 nucleotides ABIE51_RS01465 and ABIE51_RS01470 are separated by 63 nucleotides
ABIE51_RS01455: ABIE51_RS01455 - type I glutamate--ammonia ligase, at 316,790 to 318,199
_RS01455
ABIE51_RS01460: ABIE51_RS01460 - undecaprenyl-diphosphate phosphatase, at 318,506 to 319,360
_RS01460
ABIE51_RS01465: ABIE51_RS01465 - META and DUF4377 domain-containing protein, at 319,459 to 320,286
_RS01465
ABIE51_RS01470: ABIE51_RS01470 - YbhB/YbcL family Raf kinase inhibitor-like protein, at 320,350 to 320,976
_RS01470
Position (kb) 318
319
320 Strain fitness (log2 ratio) -1
0
1
2
3 at 318.270 kb on + strand at 318.308 kb on + strand at 318.417 kb on + strand at 319.355 kb on - strand at 319.355 kb on - strand at 319.413 kb on + strand at 319.413 kb on + strand at 319.413 kb on + strand at 319.414 kb on - strand at 319.414 kb on - strand at 319.414 kb on - strand at 319.414 kb on - strand at 319.762 kb on + strand, within ABIE51_RS01465 at 319.762 kb on + strand, within ABIE51_RS01465 at 319.763 kb on - strand, within ABIE51_RS01465 at 319.763 kb on - strand, within ABIE51_RS01465 at 320.140 kb on + strand, within ABIE51_RS01465 at 320.140 kb on + strand, within ABIE51_RS01465 at 320.140 kb on + strand, within ABIE51_RS01465 at 320.140 kb on + strand, within ABIE51_RS01465 at 320.245 kb on + strand at 320.245 kb on + strand at 320.245 kb on + strand at 320.245 kb on + strand at 320.245 kb on + strand at 320.245 kb on + strand at 320.245 kb on + strand at 320.245 kb on + strand at 320.245 kb on + strand at 320.246 kb on - strand at 320.246 kb on - strand at 320.246 kb on - strand at 320.246 kb on - strand at 320.246 kb on - strand at 320.246 kb on - strand at 320.246 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 318,270 + -0.1 318,308 + +1.5 318,417 + -1.0 319,355 - +0.1 319,355 - -0.6 319,413 + +0.4 319,413 + -0.4 319,413 + +0.2 319,414 - -0.9 319,414 - +0.2 319,414 - -0.2 319,414 - -0.1 319,762 + ABIE51_RS01465 0.37 +0.5 319,762 + ABIE51_RS01465 0.37 -0.7 319,763 - ABIE51_RS01465 0.37 -0.0 319,763 - ABIE51_RS01465 0.37 +0.2 320,140 + ABIE51_RS01465 0.82 -0.4 320,140 + ABIE51_RS01465 0.82 +0.3 320,140 + ABIE51_RS01465 0.82 -0.1 320,140 + ABIE51_RS01465 0.82 +0.2 320,245 + -1.0 320,245 + -0.0 320,245 + -0.0 320,245 + +0.3 320,245 + +0.7 320,245 + +0.5 320,245 + -1.0 320,245 + -1.1 320,245 + +0.1 320,246 - +1.2 320,246 - +0.4 320,246 - -0.2 320,246 - +3.0 320,246 - -0.4 320,246 - -0.4 320,246 - +2.0
Or see this region's nucleotide sequence