Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS00345 and ABIE51_RS00350 are separated by 6 nucleotides ABIE51_RS00350 and ABIE51_RS00355 are separated by 73 nucleotides
ABIE51_RS00345: ABIE51_RS00345 - serine/threonine-protein kinase, at 73,308 to 76,136
_RS00345
ABIE51_RS00350: ABIE51_RS00350 - thymidine kinase, at 76,143 to 76,763
_RS00350
ABIE51_RS00355: ABIE51_RS00355 - methylglyoxal synthase, at 76,837 to 77,715
_RS00355
Position (kb) 76
77 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 75.306 kb on + strand, within ABIE51_RS00345 at 75.307 kb on - strand, within ABIE51_RS00345 at 75.307 kb on - strand, within ABIE51_RS00345 at 75.362 kb on + strand, within ABIE51_RS00345 at 75.363 kb on - strand, within ABIE51_RS00345 at 75.832 kb on - strand, within ABIE51_RS00345 at 75.990 kb on + strand at 75.991 kb on - strand at 76.049 kb on + strand at 76.049 kb on + strand at 76.050 kb on - strand at 76.050 kb on - strand at 76.050 kb on - strand at 76.204 kb on + strand at 76.205 kb on - strand, within ABIE51_RS00350 at 76.205 kb on - strand, within ABIE51_RS00350 at 76.228 kb on + strand, within ABIE51_RS00350 at 76.228 kb on + strand, within ABIE51_RS00350 at 76.229 kb on - strand, within ABIE51_RS00350 at 76.229 kb on - strand, within ABIE51_RS00350 at 76.229 kb on - strand, within ABIE51_RS00350 at 76.229 kb on - strand, within ABIE51_RS00350 at 76.229 kb on - strand, within ABIE51_RS00350 at 76.229 kb on - strand, within ABIE51_RS00350 at 76.372 kb on + strand, within ABIE51_RS00350 at 76.372 kb on + strand, within ABIE51_RS00350 at 76.372 kb on + strand, within ABIE51_RS00350 at 76.372 kb on + strand, within ABIE51_RS00350 at 76.372 kb on + strand, within ABIE51_RS00350 at 76.373 kb on - strand, within ABIE51_RS00350 at 76.421 kb on - strand, within ABIE51_RS00350 at 76.687 kb on + strand, within ABIE51_RS00350 at 76.687 kb on + strand, within ABIE51_RS00350 at 76.688 kb on - strand, within ABIE51_RS00350 at 76.688 kb on - strand, within ABIE51_RS00350 at 76.688 kb on - strand, within ABIE51_RS00350 at 76.741 kb on + strand at 76.741 kb on + strand at 76.744 kb on + strand at 76.744 kb on + strand at 76.744 kb on + strand at 76.744 kb on + strand at 76.744 kb on + strand at 76.745 kb on - strand at 76.745 kb on - strand at 76.745 kb on - strand at 76.745 kb on - strand at 76.750 kb on + strand at 76.750 kb on + strand at 76.751 kb on - strand at 76.751 kb on - strand at 76.774 kb on + strand at 76.775 kb on - strand at 76.795 kb on + strand at 76.796 kb on - strand at 76.796 kb on - strand at 76.796 kb on - strand at 77.201 kb on + strand, within ABIE51_RS00355 at 77.201 kb on + strand, within ABIE51_RS00355 at 77.441 kb on + strand, within ABIE51_RS00355 at 77.441 kb on + strand, within ABIE51_RS00355 at 77.441 kb on + strand, within ABIE51_RS00355 at 77.441 kb on + strand, within ABIE51_RS00355 at 77.441 kb on + strand, within ABIE51_RS00355 at 77.441 kb on + strand, within ABIE51_RS00355 at 77.441 kb on + strand, within ABIE51_RS00355 at 77.441 kb on + strand, within ABIE51_RS00355 at 77.442 kb on - strand, within ABIE51_RS00355 at 77.442 kb on - strand, within ABIE51_RS00355 at 77.549 kb on + strand, within ABIE51_RS00355 at 77.748 kb on + strand at 77.749 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 75,306 + ABIE51_RS00345 0.71 +0.3 75,307 - ABIE51_RS00345 0.71 +1.2 75,307 - ABIE51_RS00345 0.71 +0.3 75,362 + ABIE51_RS00345 0.73 -1.0 75,363 - ABIE51_RS00345 0.73 +0.1 75,832 - ABIE51_RS00345 0.89 +0.2 75,990 + +2.0 75,991 - +0.5 76,049 + -0.4 76,049 + +0.3 76,050 - +0.0 76,050 - -1.3 76,050 - -0.1 76,204 + -0.5 76,205 - ABIE51_RS00350 0.10 -1.4 76,205 - ABIE51_RS00350 0.10 +0.3 76,228 + ABIE51_RS00350 0.14 +0.2 76,228 + ABIE51_RS00350 0.14 -1.2 76,229 - ABIE51_RS00350 0.14 +0.1 76,229 - ABIE51_RS00350 0.14 -0.2 76,229 - ABIE51_RS00350 0.14 +0.4 76,229 - ABIE51_RS00350 0.14 -0.0 76,229 - ABIE51_RS00350 0.14 -1.5 76,229 - ABIE51_RS00350 0.14 -0.2 76,372 + ABIE51_RS00350 0.37 -1.9 76,372 + ABIE51_RS00350 0.37 -1.1 76,372 + ABIE51_RS00350 0.37 -0.3 76,372 + ABIE51_RS00350 0.37 +3.0 76,372 + ABIE51_RS00350 0.37 -0.6 76,373 - ABIE51_RS00350 0.37 -1.0 76,421 - ABIE51_RS00350 0.45 -1.0 76,687 + ABIE51_RS00350 0.88 -0.1 76,687 + ABIE51_RS00350 0.88 -0.0 76,688 - ABIE51_RS00350 0.88 +0.5 76,688 - ABIE51_RS00350 0.88 +0.2 76,688 - ABIE51_RS00350 0.88 -0.1 76,741 + -0.4 76,741 + -1.0 76,744 + +0.9 76,744 + -1.0 76,744 + +0.5 76,744 + -0.2 76,744 + -0.8 76,745 - -0.9 76,745 - +0.5 76,745 - -0.8 76,745 - -0.6 76,750 + +0.1 76,750 + -1.5 76,751 - -0.7 76,751 - -1.1 76,774 + +0.8 76,775 - -0.3 76,795 + -1.4 76,796 - -1.3 76,796 - -0.9 76,796 - -0.2 77,201 + ABIE51_RS00355 0.41 -0.2 77,201 + ABIE51_RS00355 0.41 -0.5 77,441 + ABIE51_RS00355 0.69 -0.3 77,441 + ABIE51_RS00355 0.69 +3.0 77,441 + ABIE51_RS00355 0.69 -0.3 77,441 + ABIE51_RS00355 0.69 +0.4 77,441 + ABIE51_RS00355 0.69 +1.9 77,441 + ABIE51_RS00355 0.69 -1.1 77,441 + ABIE51_RS00355 0.69 +1.4 77,441 + ABIE51_RS00355 0.69 +0.2 77,442 - ABIE51_RS00355 0.69 +2.0 77,442 - ABIE51_RS00355 0.69 -0.7 77,549 + ABIE51_RS00355 0.81 +0.2 77,748 + -0.6 77,749 - +1.5
Or see this region's nucleotide sequence