Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3992 and Pf6N2E2_3993 are separated by 16 nucleotides Pf6N2E2_3993 and Pf6N2E2_3994 overlap by 48 nucleotides
Pf6N2E2_3992 - Fe2+-dicitrate sensor, membrane component, at 4,661,307 to 4,662,308
_3992
Pf6N2E2_3993 - hypothetical protein, at 4,662,325 to 4,662,441
_3993
Pf6N2E2_3994 - Ferrichrome-iron receptor, at 4,662,394 to 4,664,898
_3994
Position (kb)
4662
4663 Strain fitness (log2 ratio)
-2
-1
0
1 at 4662.015 kb on + strand, within Pf6N2E2_3992 at 4662.015 kb on + strand, within Pf6N2E2_3992 at 4662.015 kb on + strand, within Pf6N2E2_3992 at 4662.016 kb on - strand, within Pf6N2E2_3992 at 4662.133 kb on + strand, within Pf6N2E2_3992 at 4662.133 kb on + strand, within Pf6N2E2_3992 at 4662.133 kb on + strand, within Pf6N2E2_3992 at 4662.134 kb on - strand, within Pf6N2E2_3992 at 4662.134 kb on - strand, within Pf6N2E2_3992 at 4662.134 kb on - strand, within Pf6N2E2_3992 at 4662.134 kb on - strand, within Pf6N2E2_3992 at 4662.134 kb on - strand, within Pf6N2E2_3992 at 4662.153 kb on + strand, within Pf6N2E2_3992 at 4662.155 kb on + strand, within Pf6N2E2_3992 at 4662.155 kb on + strand, within Pf6N2E2_3992 at 4662.155 kb on + strand, within Pf6N2E2_3992 at 4662.155 kb on + strand, within Pf6N2E2_3992 at 4662.156 kb on - strand, within Pf6N2E2_3992 at 4662.156 kb on - strand, within Pf6N2E2_3992 at 4662.156 kb on - strand, within Pf6N2E2_3992 at 4662.156 kb on - strand, within Pf6N2E2_3992 at 4662.156 kb on - strand, within Pf6N2E2_3992 at 4662.156 kb on - strand, within Pf6N2E2_3992 at 4662.156 kb on - strand, within Pf6N2E2_3992 at 4662.350 kb on + strand, within Pf6N2E2_3993 at 4662.350 kb on + strand, within Pf6N2E2_3993 at 4662.350 kb on + strand, within Pf6N2E2_3993 at 4662.350 kb on + strand, within Pf6N2E2_3993 at 4662.351 kb on - strand, within Pf6N2E2_3993 at 4662.351 kb on - strand, within Pf6N2E2_3993 at 4662.361 kb on + strand, within Pf6N2E2_3993 at 4662.361 kb on + strand, within Pf6N2E2_3993 at 4662.362 kb on - strand, within Pf6N2E2_3993 at 4662.362 kb on - strand, within Pf6N2E2_3993 at 4662.362 kb on - strand, within Pf6N2E2_3993 at 4662.390 kb on + strand, within Pf6N2E2_3993 at 4662.390 kb on + strand, within Pf6N2E2_3993 at 4662.390 kb on + strand, within Pf6N2E2_3993 at 4662.390 kb on + strand, within Pf6N2E2_3993 at 4662.390 kb on + strand, within Pf6N2E2_3993 at 4662.391 kb on - strand, within Pf6N2E2_3993 at 4662.391 kb on - strand, within Pf6N2E2_3993 at 4662.391 kb on - strand, within Pf6N2E2_3993 at 4662.391 kb on - strand, within Pf6N2E2_3993 at 4662.407 kb on + strand at 4662.407 kb on + strand at 4662.407 kb on + strand at 4662.560 kb on - strand at 4662.560 kb on - strand at 4662.682 kb on + strand, within Pf6N2E2_3994 at 4662.757 kb on + strand, within Pf6N2E2_3994 at 4662.757 kb on + strand, within Pf6N2E2_3994 at 4662.758 kb on - strand, within Pf6N2E2_3994 at 4662.758 kb on - strand, within Pf6N2E2_3994 at 4662.758 kb on - strand, within Pf6N2E2_3994 at 4662.758 kb on - strand, within Pf6N2E2_3994 at 4662.856 kb on + strand, within Pf6N2E2_3994 at 4662.988 kb on + strand, within Pf6N2E2_3994 at 4662.989 kb on - strand, within Pf6N2E2_3994 at 4662.989 kb on - strand, within Pf6N2E2_3994 at 4663.039 kb on + strand, within Pf6N2E2_3994 at 4663.039 kb on + strand, within Pf6N2E2_3994 at 4663.039 kb on + strand, within Pf6N2E2_3994 at 4663.039 kb on + strand, within Pf6N2E2_3994 at 4663.039 kb on + strand, within Pf6N2E2_3994 at 4663.039 kb on + strand, within Pf6N2E2_3994 at 4663.039 kb on + strand, within Pf6N2E2_3994 at 4663.040 kb on - strand, within Pf6N2E2_3994 at 4663.040 kb on - strand, within Pf6N2E2_3994 at 4663.077 kb on + strand, within Pf6N2E2_3994 at 4663.084 kb on + strand, within Pf6N2E2_3994 at 4663.084 kb on + strand, within Pf6N2E2_3994 at 4663.084 kb on + strand, within Pf6N2E2_3994 at 4663.084 kb on + strand, within Pf6N2E2_3994 at 4663.085 kb on - strand, within Pf6N2E2_3994 at 4663.085 kb on - strand, within Pf6N2E2_3994 at 4663.123 kb on + strand, within Pf6N2E2_3994 at 4663.123 kb on + strand, within Pf6N2E2_3994 at 4663.123 kb on + strand, within Pf6N2E2_3994 at 4663.123 kb on + strand, within Pf6N2E2_3994 at 4663.123 kb on + strand, within Pf6N2E2_3994 at 4663.123 kb on + strand, within Pf6N2E2_3994 at 4663.123 kb on + strand, within Pf6N2E2_3994 at 4663.123 kb on + strand, within Pf6N2E2_3994 at 4663.124 kb on - strand, within Pf6N2E2_3994 at 4663.124 kb on - strand, within Pf6N2E2_3994 at 4663.124 kb on - strand, within Pf6N2E2_3994 at 4663.124 kb on - strand, within Pf6N2E2_3994 at 4663.124 kb on - strand, within Pf6N2E2_3994 at 4663.124 kb on - strand, within Pf6N2E2_3994 at 4663.124 kb on - strand, within Pf6N2E2_3994 at 4663.124 kb on - strand, within Pf6N2E2_3994 at 4663.148 kb on - strand, within Pf6N2E2_3994 at 4663.148 kb on - strand, within Pf6N2E2_3994 at 4663.196 kb on - strand, within Pf6N2E2_3994 at 4663.196 kb on - strand, within Pf6N2E2_3994 at 4663.249 kb on + strand, within Pf6N2E2_3994 at 4663.249 kb on + strand, within Pf6N2E2_3994 at 4663.351 kb on + strand, within Pf6N2E2_3994 at 4663.351 kb on + strand, within Pf6N2E2_3994 at 4663.352 kb on - strand, within Pf6N2E2_3994 at 4663.352 kb on - strand, within Pf6N2E2_3994 at 4663.352 kb on - strand, within Pf6N2E2_3994
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 4,662,015 + Pf6N2E2_3992 0.71 -0.1 4,662,015 + Pf6N2E2_3992 0.71 +0.6 4,662,015 + Pf6N2E2_3992 0.71 +1.2 4,662,016 - Pf6N2E2_3992 0.71 -0.3 4,662,133 + Pf6N2E2_3992 0.82 +0.7 4,662,133 + Pf6N2E2_3992 0.82 +0.6 4,662,133 + Pf6N2E2_3992 0.82 -0.0 4,662,134 - Pf6N2E2_3992 0.83 +1.1 4,662,134 - Pf6N2E2_3992 0.83 +1.2 4,662,134 - Pf6N2E2_3992 0.83 +0.2 4,662,134 - Pf6N2E2_3992 0.83 +0.4 4,662,134 - Pf6N2E2_3992 0.83 +0.7 4,662,153 + Pf6N2E2_3992 0.84 +0.5 4,662,155 + Pf6N2E2_3992 0.85 -0.3 4,662,155 + Pf6N2E2_3992 0.85 +0.3 4,662,155 + Pf6N2E2_3992 0.85 -0.4 4,662,155 + Pf6N2E2_3992 0.85 +0.3 4,662,156 - Pf6N2E2_3992 0.85 +0.2 4,662,156 - Pf6N2E2_3992 0.85 -0.9 4,662,156 - Pf6N2E2_3992 0.85 +0.2 4,662,156 - Pf6N2E2_3992 0.85 -0.1 4,662,156 - Pf6N2E2_3992 0.85 -0.1 4,662,156 - Pf6N2E2_3992 0.85 -0.0 4,662,156 - Pf6N2E2_3992 0.85 +0.8 4,662,350 + Pf6N2E2_3993 0.21 -0.7 4,662,350 + Pf6N2E2_3993 0.21 -0.0 4,662,350 + Pf6N2E2_3993 0.21 +0.4 4,662,350 + Pf6N2E2_3993 0.21 +0.5 4,662,351 - Pf6N2E2_3993 0.22 +0.0 4,662,351 - Pf6N2E2_3993 0.22 +0.1 4,662,361 + Pf6N2E2_3993 0.31 -0.6 4,662,361 + Pf6N2E2_3993 0.31 -0.7 4,662,362 - Pf6N2E2_3993 0.32 -2.2 4,662,362 - Pf6N2E2_3993 0.32 -0.1 4,662,362 - Pf6N2E2_3993 0.32 -0.7 4,662,390 + Pf6N2E2_3993 0.56 -0.4 4,662,390 + Pf6N2E2_3993 0.56 -1.2 4,662,390 + Pf6N2E2_3993 0.56 +0.1 4,662,390 + Pf6N2E2_3993 0.56 +0.3 4,662,390 + Pf6N2E2_3993 0.56 -0.4 4,662,391 - Pf6N2E2_3993 0.56 +0.4 4,662,391 - Pf6N2E2_3993 0.56 -1.0 4,662,391 - Pf6N2E2_3993 0.56 -0.4 4,662,391 - Pf6N2E2_3993 0.56 +0.4 4,662,407 + -0.4 4,662,407 + +0.1 4,662,407 + +0.6 4,662,560 - +0.4 4,662,560 - -0.1 4,662,682 + Pf6N2E2_3994 0.11 +0.5 4,662,757 + Pf6N2E2_3994 0.14 +0.0 4,662,757 + Pf6N2E2_3994 0.14 +0.7 4,662,758 - Pf6N2E2_3994 0.15 +0.2 4,662,758 - Pf6N2E2_3994 0.15 -0.8 4,662,758 - Pf6N2E2_3994 0.15 +0.0 4,662,758 - Pf6N2E2_3994 0.15 -0.2 4,662,856 + Pf6N2E2_3994 0.18 -1.3 4,662,988 + Pf6N2E2_3994 0.24 +0.4 4,662,989 - Pf6N2E2_3994 0.24 -0.8 4,662,989 - Pf6N2E2_3994 0.24 +0.4 4,663,039 + Pf6N2E2_3994 0.26 -1.2 4,663,039 + Pf6N2E2_3994 0.26 +0.7 4,663,039 + Pf6N2E2_3994 0.26 -1.1 4,663,039 + Pf6N2E2_3994 0.26 -0.1 4,663,039 + Pf6N2E2_3994 0.26 +0.8 4,663,039 + Pf6N2E2_3994 0.26 -0.6 4,663,039 + Pf6N2E2_3994 0.26 +0.7 4,663,040 - Pf6N2E2_3994 0.26 -0.2 4,663,040 - Pf6N2E2_3994 0.26 +0.7 4,663,077 + Pf6N2E2_3994 0.27 -0.8 4,663,084 + Pf6N2E2_3994 0.28 +0.5 4,663,084 + Pf6N2E2_3994 0.28 -0.4 4,663,084 + Pf6N2E2_3994 0.28 +0.1 4,663,084 + Pf6N2E2_3994 0.28 +0.4 4,663,085 - Pf6N2E2_3994 0.28 +0.6 4,663,085 - Pf6N2E2_3994 0.28 -0.4 4,663,123 + Pf6N2E2_3994 0.29 +0.2 4,663,123 + Pf6N2E2_3994 0.29 -1.1 4,663,123 + Pf6N2E2_3994 0.29 -1.3 4,663,123 + Pf6N2E2_3994 0.29 -0.2 4,663,123 + Pf6N2E2_3994 0.29 +0.3 4,663,123 + Pf6N2E2_3994 0.29 +0.3 4,663,123 + Pf6N2E2_3994 0.29 +0.6 4,663,123 + Pf6N2E2_3994 0.29 -0.1 4,663,124 - Pf6N2E2_3994 0.29 +0.6 4,663,124 - Pf6N2E2_3994 0.29 -0.9 4,663,124 - Pf6N2E2_3994 0.29 -0.1 4,663,124 - Pf6N2E2_3994 0.29 -1.4 4,663,124 - Pf6N2E2_3994 0.29 +1.3 4,663,124 - Pf6N2E2_3994 0.29 +0.2 4,663,124 - Pf6N2E2_3994 0.29 -0.2 4,663,124 - Pf6N2E2_3994 0.29 +0.5 4,663,148 - Pf6N2E2_3994 0.30 +0.0 4,663,148 - Pf6N2E2_3994 0.30 +0.3 4,663,196 - Pf6N2E2_3994 0.32 -0.3 4,663,196 - Pf6N2E2_3994 0.32 +0.7 4,663,249 + Pf6N2E2_3994 0.34 +0.5 4,663,249 + Pf6N2E2_3994 0.34 +0.4 4,663,351 + Pf6N2E2_3994 0.38 +0.7 4,663,351 + Pf6N2E2_3994 0.38 +0.3 4,663,352 - Pf6N2E2_3994 0.38 +0.9 4,663,352 - Pf6N2E2_3994 0.38 +0.3 4,663,352 - Pf6N2E2_3994 0.38 +1.3
Or see this region's nucleotide sequence