Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1487 and Pf6N2E2_1488 are separated by 39 nucleotides Pf6N2E2_1488 and Pf6N2E2_1489 are separated by 797 nucleotides
Pf6N2E2_1487 - hypothetical protein, at 1,738,522 to 1,739,610
_1487
Pf6N2E2_1488 - hypothetical protein, at 1,739,650 to 1,740,948
_1488
Pf6N2E2_1489 - hypothetical protein, at 1,741,746 to 1,741,889
_1489
Position (kb)
1739
1740
1741 Strain fitness (log2 ratio)
-1
0
1
2 at 1738.685 kb on + strand, within Pf6N2E2_1487 at 1739.102 kb on + strand, within Pf6N2E2_1487 at 1740.278 kb on - strand, within Pf6N2E2_1488 at 1740.518 kb on - strand, within Pf6N2E2_1488 at 1740.518 kb on - strand, within Pf6N2E2_1488 at 1740.586 kb on - strand, within Pf6N2E2_1488 at 1740.586 kb on - strand, within Pf6N2E2_1488 at 1740.586 kb on - strand, within Pf6N2E2_1488 at 1740.587 kb on + strand, within Pf6N2E2_1488 at 1740.588 kb on - strand, within Pf6N2E2_1488 at 1740.588 kb on - strand, within Pf6N2E2_1488 at 1740.643 kb on - strand, within Pf6N2E2_1488 at 1740.655 kb on + strand, within Pf6N2E2_1488 at 1740.657 kb on + strand, within Pf6N2E2_1488 at 1740.657 kb on + strand, within Pf6N2E2_1488 at 1740.756 kb on + strand, within Pf6N2E2_1488 at 1740.770 kb on + strand, within Pf6N2E2_1488 at 1740.794 kb on + strand, within Pf6N2E2_1488 at 1740.794 kb on + strand, within Pf6N2E2_1488 at 1740.794 kb on + strand, within Pf6N2E2_1488 at 1740.794 kb on + strand, within Pf6N2E2_1488 at 1740.909 kb on - strand at 1740.909 kb on - strand at 1741.144 kb on - strand at 1741.268 kb on + strand at 1741.379 kb on - strand at 1741.516 kb on - strand at 1741.559 kb on + strand at 1741.658 kb on + strand at 1741.658 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 1,738,685 + Pf6N2E2_1487 0.15 +1.6 1,739,102 + Pf6N2E2_1487 0.53 +1.3 1,740,278 - Pf6N2E2_1488 0.48 +1.8 1,740,518 - Pf6N2E2_1488 0.67 -0.5 1,740,518 - Pf6N2E2_1488 0.67 +0.1 1,740,586 - Pf6N2E2_1488 0.72 -0.9 1,740,586 - Pf6N2E2_1488 0.72 +1.2 1,740,586 - Pf6N2E2_1488 0.72 +0.8 1,740,587 + Pf6N2E2_1488 0.72 +0.8 1,740,588 - Pf6N2E2_1488 0.72 -0.8 1,740,588 - Pf6N2E2_1488 0.72 +1.0 1,740,643 - Pf6N2E2_1488 0.76 +0.1 1,740,655 + Pf6N2E2_1488 0.77 +1.7 1,740,657 + Pf6N2E2_1488 0.78 -0.1 1,740,657 + Pf6N2E2_1488 0.78 +0.7 1,740,756 + Pf6N2E2_1488 0.85 +0.9 1,740,770 + Pf6N2E2_1488 0.86 +1.8 1,740,794 + Pf6N2E2_1488 0.88 +0.5 1,740,794 + Pf6N2E2_1488 0.88 +0.7 1,740,794 + Pf6N2E2_1488 0.88 -1.1 1,740,794 + Pf6N2E2_1488 0.88 +1.2 1,740,909 - +0.4 1,740,909 - +0.4 1,741,144 - -1.0 1,741,268 + -1.6 1,741,379 - +0.1 1,741,516 - -0.0 1,741,559 + +0.0 1,741,658 + +0.4 1,741,658 + +0.7
Or see this region's nucleotide sequence