Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_5286 and Pf1N1B4_5287 are separated by 712 nucleotides
Pf1N1B4_5286 - hypothetical protein, at 40,203 to 40,397
_5286
Pf1N1B4_5287 - hypothetical protein, at 41,110 to 41,250
_5287
Position (kb) 40
41 Strain fitness (log2 ratio) -1
0
1
2
3 at 39.207 kb on + strand at 39.207 kb on + strand at 39.207 kb on + strand at 39.208 kb on - strand at 39.267 kb on + strand at 39.280 kb on - strand at 39.327 kb on + strand at 39.327 kb on + strand at 39.328 kb on - strand at 39.328 kb on - strand at 39.330 kb on + strand at 39.330 kb on + strand at 39.331 kb on - strand at 39.367 kb on + strand at 39.367 kb on + strand at 39.367 kb on + strand at 39.368 kb on - strand at 39.462 kb on + strand at 39.462 kb on + strand at 39.463 kb on - strand at 39.484 kb on + strand at 39.485 kb on - strand at 39.495 kb on + strand at 39.496 kb on - strand at 39.496 kb on - strand at 39.496 kb on - strand at 39.573 kb on + strand at 39.573 kb on + strand at 39.573 kb on + strand at 39.599 kb on + strand at 39.599 kb on + strand at 39.645 kb on + strand at 39.645 kb on + strand at 39.646 kb on - strand at 39.646 kb on - strand at 39.680 kb on + strand at 39.680 kb on + strand at 39.681 kb on - strand at 39.694 kb on + strand at 39.860 kb on + strand at 39.861 kb on - strand at 40.089 kb on + strand at 40.089 kb on + strand at 40.089 kb on + strand at 40.160 kb on + strand at 40.292 kb on + strand, within Pf1N1B4_5286 at 40.292 kb on + strand, within Pf1N1B4_5286 at 40.293 kb on - strand, within Pf1N1B4_5286 at 40.293 kb on - strand, within Pf1N1B4_5286 at 40.296 kb on + strand, within Pf1N1B4_5286 at 40.296 kb on + strand, within Pf1N1B4_5286 at 40.296 kb on + strand, within Pf1N1B4_5286 at 40.297 kb on - strand, within Pf1N1B4_5286 at 40.297 kb on - strand at 40.347 kb on + strand, within Pf1N1B4_5286 at 40.347 kb on + strand, within Pf1N1B4_5286 at 40.347 kb on + strand, within Pf1N1B4_5286 at 40.355 kb on + strand at 40.355 kb on + strand, within Pf1N1B4_5286 at 40.355 kb on + strand, within Pf1N1B4_5286 at 40.355 kb on + strand, within Pf1N1B4_5286 at 40.356 kb on - strand, within Pf1N1B4_5286 at 40.471 kb on - strand at 40.590 kb on + strand at 40.591 kb on - strand at 40.638 kb on - strand at 40.646 kb on + strand at 40.646 kb on + strand at 40.647 kb on - strand at 40.647 kb on - strand at 40.895 kb on + strand at 40.895 kb on + strand at 40.920 kb on + strand at 40.923 kb on + strand at 41.088 kb on - strand at 41.166 kb on + strand, within Pf1N1B4_5287 at 41.183 kb on + strand, within Pf1N1B4_5287 at 41.283 kb on + strand at 41.283 kb on + strand at 41.283 kb on + strand at 41.284 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 39,207 + +0.0 39,207 + -0.4 39,207 + +0.1 39,208 - +1.0 39,267 + +0.2 39,280 - +0.7 39,327 + +0.2 39,327 + +0.4 39,328 - -0.6 39,328 - -0.6 39,330 + -1.1 39,330 + +0.7 39,331 - +0.7 39,367 + +1.0 39,367 + +1.6 39,367 + -0.2 39,368 - +0.4 39,462 + +0.1 39,462 + -0.6 39,463 - +0.7 39,484 + +0.4 39,485 - -0.5 39,495 + +0.4 39,496 - -0.6 39,496 - +0.8 39,496 - +1.4 39,573 + +1.0 39,573 + -0.6 39,573 + -1.0 39,599 + +0.4 39,599 + +1.0 39,645 + +0.9 39,645 + -0.8 39,646 - -1.4 39,646 - +0.6 39,680 + +0.6 39,680 + +1.0 39,681 - -1.1 39,694 + +0.6 39,860 + +1.0 39,861 - -0.8 40,089 + -0.4 40,089 + +0.7 40,089 + -0.1 40,160 + -1.3 40,292 + Pf1N1B4_5286 0.46 -0.1 40,292 + Pf1N1B4_5286 0.46 +0.4 40,293 - Pf1N1B4_5286 0.46 +0.6 40,293 - Pf1N1B4_5286 0.46 +1.6 40,296 + Pf1N1B4_5286 0.48 -0.3 40,296 + Pf1N1B4_5286 0.48 +1.6 40,296 + Pf1N1B4_5286 0.48 +0.4 40,297 - Pf1N1B4_5286 0.48 +2.0 40,297 - +2.0 40,347 + Pf1N1B4_5286 0.74 +0.4 40,347 + Pf1N1B4_5286 0.74 +0.9 40,347 + Pf1N1B4_5286 0.74 +0.2 40,355 + +0.0 40,355 + Pf1N1B4_5286 0.78 -0.1 40,355 + Pf1N1B4_5286 0.78 +0.6 40,355 + Pf1N1B4_5286 0.78 -0.3 40,356 - Pf1N1B4_5286 0.78 -0.4 40,471 - +0.7 40,590 + +1.2 40,591 - +0.2 40,638 - +0.9 40,646 + +2.0 40,646 + +0.4 40,647 - -1.1 40,647 - +3.0 40,895 + -0.4 40,895 + -0.5 40,920 + +1.3 40,923 + +0.4 41,088 - +0.7 41,166 + Pf1N1B4_5287 0.40 -0.8 41,183 + Pf1N1B4_5287 0.52 -0.6 41,283 + +0.1 41,283 + -0.7 41,283 + -0.2 41,284 - +1.0
Or see this region's nucleotide sequence