Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_1262 and Pf1N1B4_1263 overlap by 4 nucleotides Pf1N1B4_1263 and Pf1N1B4_1264 overlap by 47 nucleotides
Pf1N1B4_1262 - Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4), at 1,441,902 to 1,444,295
_1262
Pf1N1B4_1263 - Cu(I)-responsive transcriptional regulator, at 1,444,292 to 1,444,705
_1263
Pf1N1B4_1264 - Integral membrane efflux protein, at 1,444,659 to 1,445,873
_1264
Position (kb)
1444
1445 Strain fitness (log2 ratio)
-2
-1
0
1 at 1443.785 kb on - strand, within Pf1N1B4_1262 at 1444.108 kb on - strand at 1444.146 kb on + strand at 1444.146 kb on + strand at 1444.146 kb on + strand at 1444.147 kb on - strand at 1444.147 kb on - strand at 1444.147 kb on - strand at 1444.249 kb on + strand at 1444.349 kb on + strand, within Pf1N1B4_1263 at 1444.349 kb on + strand, within Pf1N1B4_1263 at 1444.406 kb on + strand, within Pf1N1B4_1263 at 1444.426 kb on + strand, within Pf1N1B4_1263 at 1444.427 kb on - strand, within Pf1N1B4_1263 at 1444.618 kb on - strand, within Pf1N1B4_1263 at 1444.789 kb on + strand, within Pf1N1B4_1264 at 1444.790 kb on - strand, within Pf1N1B4_1264 at 1444.964 kb on - strand, within Pf1N1B4_1264 at 1445.055 kb on - strand, within Pf1N1B4_1264 at 1445.360 kb on - strand, within Pf1N1B4_1264 at 1445.360 kb on - strand, within Pf1N1B4_1264 at 1445.360 kb on - strand, within Pf1N1B4_1264 at 1445.360 kb on - strand, within Pf1N1B4_1264 at 1445.360 kb on - strand, within Pf1N1B4_1264 at 1445.512 kb on - strand, within Pf1N1B4_1264 at 1445.683 kb on + strand, within Pf1N1B4_1264
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 1,443,785 - Pf1N1B4_1262 0.79 -0.3 1,444,108 - +0.2 1,444,146 + +0.4 1,444,146 + -0.4 1,444,146 + -1.2 1,444,147 - -1.7 1,444,147 - +0.2 1,444,147 - -1.9 1,444,249 + -0.1 1,444,349 + Pf1N1B4_1263 0.14 -0.7 1,444,349 + Pf1N1B4_1263 0.14 -1.2 1,444,406 + Pf1N1B4_1263 0.28 +0.4 1,444,426 + Pf1N1B4_1263 0.32 +0.8 1,444,427 - Pf1N1B4_1263 0.33 -0.9 1,444,618 - Pf1N1B4_1263 0.79 -0.6 1,444,789 + Pf1N1B4_1264 0.11 -1.9 1,444,790 - Pf1N1B4_1264 0.11 +0.5 1,444,964 - Pf1N1B4_1264 0.25 +0.2 1,445,055 - Pf1N1B4_1264 0.33 -0.3 1,445,360 - Pf1N1B4_1264 0.58 +0.4 1,445,360 - Pf1N1B4_1264 0.58 +0.1 1,445,360 - Pf1N1B4_1264 0.58 -1.4 1,445,360 - Pf1N1B4_1264 0.58 +0.8 1,445,360 - Pf1N1B4_1264 0.58 -0.4 1,445,512 - Pf1N1B4_1264 0.70 +0.1 1,445,683 + Pf1N1B4_1264 0.84 -0.4
Or see this region's nucleotide sequence