Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS07395

Experiment: R2A control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A control
1,590,712	+		LRK54_RS07390	0.48	+0.4
1,590,712	+		LRK54_RS07390	0.48	-1.0
1,590,712	+		LRK54_RS07390	0.48	+0.2
1,590,712	+		LRK54_RS07390	0.48	-1.1
1,590,712	+		LRK54_RS07390	0.48	-0.5
1,590,712	+		LRK54_RS07390	0.48	-0.2
1,590,712	+		LRK54_RS07390	0.48	+0.7
1,590,713	-		LRK54_RS07390	0.48	-0.3
1,590,713	-		LRK54_RS07390	0.48	+0.0
1,590,713	-		LRK54_RS07390	0.48	+0.2
1,590,713	-		LRK54_RS07390	0.48	+0.3
1,590,713	-		LRK54_RS07390	0.48	+0.2
1,590,713	-		LRK54_RS07390	0.48	-0.5
1,590,713	-		LRK54_RS07390	0.48	+1.2
1,590,713	-		LRK54_RS07390	0.48	+0.1
1,590,799	+		LRK54_RS07390	0.53	-1.3
1,590,799	+		LRK54_RS07390	0.53	-0.2
1,590,800	-		LRK54_RS07390	0.53	+0.9
1,590,890	+		LRK54_RS07390	0.58	+1.5
1,590,890	+		LRK54_RS07390	0.58	-1.7
1,590,890	+		LRK54_RS07390	0.58	+0.5
1,590,890	+		LRK54_RS07390	0.58	-0.6
1,590,890	+		LRK54_RS07390	0.58	-1.5
1,590,890	+		LRK54_RS07390	0.58	-0.3
1,590,890	+		LRK54_RS07390	0.58	-0.5
1,590,890	+		LRK54_RS07390	0.58	+0.1
1,590,890	+		LRK54_RS07390	0.58	-1.0
1,590,891	-		LRK54_RS07390	0.58	-1.1
1,590,891	-		LRK54_RS07390	0.58	-0.4
1,590,891	-		LRK54_RS07390	0.58	+0.4
1,590,892	+		LRK54_RS07390	0.58	+0.8
1,590,892	+		LRK54_RS07390	0.58	-0.4
1,590,892	+		LRK54_RS07390	0.58	-0.4
1,590,893	-		LRK54_RS07390	0.58	-1.0
1,590,893	-		LRK54_RS07390	0.58	+0.1
1,590,893	-		LRK54_RS07390	0.58	+0.3
1,590,893	-		LRK54_RS07390	0.58	+0.7
1,590,923	+		LRK54_RS07390	0.59	-0.3
1,590,923	+		LRK54_RS07390	0.59	-0.4
1,590,923	+		LRK54_RS07390	0.59	+0.2
1,590,923	+		LRK54_RS07390	0.59	+0.7
1,590,923	+		LRK54_RS07390	0.59	+1.5
1,590,923	+		LRK54_RS07390	0.59	-0.2
1,590,923	+		LRK54_RS07390	0.59	+0.0
1,590,923	+		LRK54_RS07390	0.59	-0.9
1,590,923	+		LRK54_RS07390	0.59	+0.0
1,590,923	+		LRK54_RS07390	0.59	-0.1
1,590,923	+		LRK54_RS07390	0.59	+0.5
1,590,924	-		LRK54_RS07390	0.60	+0.1
1,590,924	-		LRK54_RS07390	0.60	-0.4
1,590,924	-		LRK54_RS07390	0.60	-0.0
1,590,924	-		LRK54_RS07390	0.60	-0.2
1,590,924	-		LRK54_RS07390	0.60	+1.1
1,590,924	-		LRK54_RS07390	0.60	+0.4
1,590,924	-		LRK54_RS07390	0.60	-0.4
1,590,924	-		LRK54_RS07390	0.60	+0.3
1,590,925	+		LRK54_RS07390	0.60	+0.2
1,590,925	+		LRK54_RS07390	0.60	+0.2
1,590,925	+		LRK54_RS07390	0.60	-0.6
1,590,925	+		LRK54_RS07390	0.60	-0.9
1,590,925	+		LRK54_RS07390	0.60	-0.5
1,590,925	+		LRK54_RS07390	0.60	+1.1
1,590,925	+		LRK54_RS07390	0.60	-0.9
1,590,925	+		LRK54_RS07390	0.60	+0.1
1,590,925	+		LRK54_RS07390	0.60	-0.8
1,590,925	+		LRK54_RS07390	0.60	-1.6
1,590,925	+		LRK54_RS07390	0.60	-0.0
1,590,925	+		LRK54_RS07390	0.60	-0.2
1,590,925	+		LRK54_RS07390	0.60	-0.5
1,590,926	-		LRK54_RS07390	0.60	-1.0
1,590,926	-		LRK54_RS07390	0.60	-0.7
1,590,926	-		LRK54_RS07390	0.60	-0.6
1,590,926	-		LRK54_RS07390	0.60	+0.9
1,590,926	-		LRK54_RS07390	0.60	-0.2
1,590,926	-		LRK54_RS07390	0.60	-0.3
1,590,926	-		LRK54_RS07390	0.60	-0.3
1,590,926	-		LRK54_RS07390	0.60	+0.8
1,590,926	-		LRK54_RS07390	0.60	-1.0
1,590,926	-		LRK54_RS07390	0.60	-0.3
1,590,926	-		LRK54_RS07390	0.60	+1.1
1,590,926	-		LRK54_RS07390	0.60	+0.4
1,590,926	-		LRK54_RS07390	0.60	-1.2
1,590,926	-		LRK54_RS07390	0.60	-0.8
1,590,980	+		LRK54_RS07390	0.63	+0.1
1,591,184	-		LRK54_RS07390	0.74	+0.2
1,591,184	-		LRK54_RS07390	0.74	+0.0
1,591,255	-		LRK54_RS07390	0.77	-0.3
1,591,255	-		LRK54_RS07390	0.77	-0.4
1,591,297	+		LRK54_RS07390	0.80	+0.1
1,591,298	-		LRK54_RS07390	0.80	-0.6
1,591,298	-		LRK54_RS07390	0.80	-0.4
1,591,298	-		LRK54_RS07390	0.80	-1.2
1,591,298	-		LRK54_RS07390	0.80	-1.6
1,591,298	-		LRK54_RS07390	0.80	+0.7
1,591,378	+		LRK54_RS07390	0.84	+1.2
1,591,378	+		LRK54_RS07390	0.84	+0.0
1,591,378	+		LRK54_RS07390	0.84	+0.2
1,591,378	+		LRK54_RS07390	0.84	+1.3
1,591,378	+		LRK54_RS07390	0.84	+0.2
1,591,378	+		LRK54_RS07390	0.84	+0.1
1,591,378	+		LRK54_RS07390	0.84	-1.1
1,591,378	+		LRK54_RS07390	0.84	+0.0
1,591,378	+		LRK54_RS07390	0.84	-0.0
1,591,378	+		LRK54_RS07390	0.84	-0.2
1,591,378	+		LRK54_RS07390	0.84	+0.1
1,591,378	+		LRK54_RS07390	0.84	-0.9
1,591,378	+		LRK54_RS07390	0.84	+1.4
1,591,378	+		LRK54_RS07390	0.84	-0.7
1,591,378	+		LRK54_RS07390	0.84	-1.3
1,591,378	+		LRK54_RS07390	0.84	+1.1
1,591,378	+		LRK54_RS07390	0.84	+0.3
1,591,378	+		LRK54_RS07390	0.84	-0.6
1,591,379	-		LRK54_RS07390	0.84	-0.9
1,591,379	-		LRK54_RS07390	0.84	-0.5
1,591,379	-		LRK54_RS07390	0.84	-2.9
1,591,379	-		LRK54_RS07390	0.84	-1.7
1,591,379	-		LRK54_RS07390	0.84	-0.8
1,591,379	-		LRK54_RS07390	0.84	+0.1
1,591,379	-		LRK54_RS07390	0.84	-0.4
1,591,379	-		LRK54_RS07390	0.84	-0.3
1,591,379	-		LRK54_RS07390	0.84	-0.2
1,591,379	-		LRK54_RS07390	0.84	+1.3
1,591,379	-		LRK54_RS07390	0.84	-0.7
1,591,426	+		LRK54_RS07390	0.87	-0.6
1,591,426	+		LRK54_RS07390	0.87	-0.4
1,591,426	+		LRK54_RS07390	0.87	-0.6
1,591,426	+		LRK54_RS07390	0.87	+0.4
1,591,427	-		LRK54_RS07390	0.87	-0.4
1,591,427	-		LRK54_RS07390	0.87	-0.1
1,591,427	-		LRK54_RS07390	0.87	-0.5
1,591,427	-		LRK54_RS07390	0.87	-0.5
1,591,427	-		LRK54_RS07390	0.87	+1.5
1,591,830	+				+0.1
1,591,830	+				-0.3
1,591,830	+				-0.5
1,591,830	+				-0.1
1,591,830	+				-0.6
1,591,831	-				+0.3
1,591,831	-				-1.0
1,591,831	-				-0.4
1,591,831	-				-0.4
1,591,860	+				-0.8
1,591,860	+				-0.1
1,591,861	-				-0.6
1,591,861	-				-0.0
1,591,863	+				-0.3
1,591,863	+				-0.4
1,591,863	+				-0.2
1,591,864	-				-0.2
1,591,864	-				+0.4
1,591,864	-				+0.9
1,591,864	-				+2.1
1,592,069	+		LRK54_RS07395	0.19	+0.6
1,592,070	-		LRK54_RS07395	0.19	-0.2
1,592,070	-		LRK54_RS07395	0.19	-1.3
1,592,070	-		LRK54_RS07395	0.19	+0.4
1,592,070	-		LRK54_RS07395	0.19	-0.8
1,592,070	-		LRK54_RS07395	0.19	+0.1
1,592,112	+		LRK54_RS07395	0.21	-0.2
1,592,113	-		LRK54_RS07395	0.21	+0.0
1,592,298	+		LRK54_RS07395	0.30	-0.8
1,592,299	-		LRK54_RS07395	0.30	-1.8
1,592,299	-		LRK54_RS07395	0.30	+1.1
1,592,424	+		LRK54_RS07395	0.36	-1.0
1,592,425	-		LRK54_RS07395	0.36	-0.0
1,592,425	-		LRK54_RS07395	0.36	+0.1
1,592,425	-		LRK54_RS07395	0.36	-0.5
1,592,425	-		LRK54_RS07395	0.36	-1.2
1,592,460	+		LRK54_RS07395	0.38	+0.2
1,592,460	+		LRK54_RS07395	0.38	-0.4
1,592,460	+		LRK54_RS07395	0.38	-0.5
1,592,460	+		LRK54_RS07395	0.38	+0.1
1,592,460	+		LRK54_RS07395	0.38	-0.9
1,592,460	+		LRK54_RS07395	0.38	-0.4
1,592,460	+		LRK54_RS07395	0.38	+0.4
1,592,460	+		LRK54_RS07395	0.38	-0.3
1,592,460	+		LRK54_RS07395	0.38	-0.7
1,592,460	+		LRK54_RS07395	0.38	-1.2
1,592,460	+		LRK54_RS07395	0.38	-0.3
1,592,460	+		LRK54_RS07395	0.38	+0.8
1,592,460	+		LRK54_RS07395	0.38	+0.1
1,592,460	+		LRK54_RS07395	0.38	-0.1
1,592,460	+		LRK54_RS07395	0.38	+0.2
1,592,460	+		LRK54_RS07395	0.38	-0.4
1,592,460	+		LRK54_RS07395	0.38	-0.1
1,592,460	+		LRK54_RS07395	0.38	-0.5
1,592,460	+		LRK54_RS07395	0.38	-0.6
1,592,460	+		LRK54_RS07395	0.38	+0.4
1,592,460	+		LRK54_RS07395	0.38	-0.5
1,592,460	+		LRK54_RS07395	0.38	-1.2
1,592,460	+		LRK54_RS07395	0.38	-0.5
1,592,460	+		LRK54_RS07395	0.38	-0.1
1,592,460	+		LRK54_RS07395	0.38	-0.3
1,592,460	+		LRK54_RS07395	0.38	-0.9
1,592,460	+		LRK54_RS07395	0.38	-0.9
1,592,460	+		LRK54_RS07395	0.38	+0.7
1,592,460	+		LRK54_RS07395	0.38	-0.8
1,592,460	+		LRK54_RS07395	0.38	+0.1
1,592,460	+		LRK54_RS07395	0.38	+0.3
1,592,460	+		LRK54_RS07395	0.38	-1.9
1,592,460	+		LRK54_RS07395	0.38	-0.3
1,592,460	+		LRK54_RS07395	0.38	-0.3
1,592,460	+		LRK54_RS07395	0.38	+0.5
1,592,460	+		LRK54_RS07395	0.38	-0.3
1,592,460	+		LRK54_RS07395	0.38	-0.2
1,592,460	+		LRK54_RS07395	0.38	-0.7
1,592,460	+		LRK54_RS07395	0.38	+0.6
1,592,460	+		LRK54_RS07395	0.38	-0.9
1,592,460	+		LRK54_RS07395	0.38	+0.5
1,592,460	+		LRK54_RS07395	0.38	-0.5
1,592,460	+		LRK54_RS07395	0.38	+0.9
1,592,460	+		LRK54_RS07395	0.38	+0.0
1,592,460	+		LRK54_RS07395	0.38	-1.5
1,592,460	+		LRK54_RS07395	0.38	-0.6
1,592,460	+		LRK54_RS07395	0.38	-0.7
1,592,460	+		LRK54_RS07395	0.38	-0.8
1,592,460	+		LRK54_RS07395	0.38	-0.6
1,592,460	+		LRK54_RS07395	0.38	-0.3
1,592,461	-		LRK54_RS07395	0.38	+0.3
1,592,461	-		LRK54_RS07395	0.38	-0.3
1,592,461	-		LRK54_RS07395	0.38	+0.2
1,592,461	-		LRK54_RS07395	0.38	+0.7
1,592,461	-		LRK54_RS07395	0.38	+0.5
1,592,461	-		LRK54_RS07395	0.38	-0.6
1,592,461	-		LRK54_RS07395	0.38	-0.4
1,592,461	-		LRK54_RS07395	0.38	-0.3
1,592,461	-		LRK54_RS07395	0.38	-0.5
1,592,461	-		LRK54_RS07395	0.38	-0.9
1,592,461	-		LRK54_RS07395	0.38	-2.2
1,592,461	-		LRK54_RS07395	0.38	-0.3
1,592,461	-		LRK54_RS07395	0.38	-0.1
1,592,461	-		LRK54_RS07395	0.38	-0.1
1,592,461	-		LRK54_RS07395	0.38	-0.8
1,592,461	-		LRK54_RS07395	0.38	+0.3
1,592,461	-		LRK54_RS07395	0.38	+0.3
1,592,461	-		LRK54_RS07395	0.38	-0.2
1,592,461	-		LRK54_RS07395	0.38	-0.4
1,592,461	-		LRK54_RS07395	0.38	-0.2
1,592,461	-		LRK54_RS07395	0.38	-0.9
1,592,461	-		LRK54_RS07395	0.38	-0.4
1,592,461	-		LRK54_RS07395	0.38	-0.3
1,592,461	-		LRK54_RS07395	0.38	-0.0
1,592,461	-		LRK54_RS07395	0.38	-0.4
1,592,461	-		LRK54_RS07395	0.38	-1.0
1,592,461	-		LRK54_RS07395	0.38	-2.2
1,592,461	-		LRK54_RS07395	0.38	-0.8
1,592,461	-		LRK54_RS07395	0.38	+0.2
1,592,461	-		LRK54_RS07395	0.38	-0.5
1,592,461	-		LRK54_RS07395	0.38	-0.3
1,592,461	-		LRK54_RS07395	0.38	-0.2
1,592,461	-		LRK54_RS07395	0.38	-0.2
1,592,461	-		LRK54_RS07395	0.38	-0.4
1,592,461	-		LRK54_RS07395	0.38	+0.1
1,592,461	-		LRK54_RS07395	0.38	-1.4
1,592,461	-		LRK54_RS07395	0.38	-0.6
1,592,461	-		LRK54_RS07395	0.38	-0.4
1,592,461	-		LRK54_RS07395	0.38	-0.5
1,592,461	-		LRK54_RS07395	0.38	+0.1
1,592,505	+		LRK54_RS07395	0.40	-0.4
1,592,505	+		LRK54_RS07395	0.40	+1.3
1,592,505	+		LRK54_RS07395	0.40	-1.9
1,592,505	+		LRK54_RS07395	0.40	-1.0
1,592,506	-		LRK54_RS07395	0.40	-0.0
1,592,506	-		LRK54_RS07395	0.40	-1.0
1,592,506	-		LRK54_RS07395	0.40	-0.3
1,592,506	-		LRK54_RS07395	0.40	-0.5
1,592,607	+		LRK54_RS07395	0.45	-0.5
1,592,607	+		LRK54_RS07395	0.45	+0.2
1,592,607	+		LRK54_RS07395	0.45	-0.2
1,592,608	-		LRK54_RS07395	0.45	-0.3
1,592,608	-		LRK54_RS07395	0.45	-0.5
1,592,633	+		LRK54_RS07395	0.46	-0.1
1,592,633	+		LRK54_RS07395	0.46	+0.6
1,592,661	+		LRK54_RS07395	0.48	-0.2
1,592,661	+		LRK54_RS07395	0.48	-0.1
1,592,661	+		LRK54_RS07395	0.48	+0.1
1,592,661	+		LRK54_RS07395	0.48	-1.0
1,592,661	+		LRK54_RS07395	0.48	+0.2
1,592,661	+		LRK54_RS07395	0.48	-1.4
1,592,661	+		LRK54_RS07395	0.48	-1.8
1,592,661	+		LRK54_RS07395	0.48	-0.9
1,592,661	+		LRK54_RS07395	0.48	+0.6
1,592,662	-		LRK54_RS07395	0.48	+0.0
1,592,662	-		LRK54_RS07395	0.48	-2.2
1,592,662	-		LRK54_RS07395	0.48	-0.3
1,592,662	-		LRK54_RS07395	0.48	+1.1
1,592,662	-		LRK54_RS07395	0.48	-0.9
1,592,662	-		LRK54_RS07395	0.48	+0.2
1,592,662	-		LRK54_RS07395	0.48	+0.2
1,592,662	-		LRK54_RS07395	0.48	+0.5
1,592,662	-		LRK54_RS07395	0.48	-0.8
1,592,662	-		LRK54_RS07395	0.48	-0.4
1,592,662	-		LRK54_RS07395	0.48	-1.1
1,592,662	-		LRK54_RS07395	0.48	-0.6
1,592,866	+		LRK54_RS07395	0.58	-0.3
1,593,077	+		LRK54_RS07395	0.68	-0.3
1,593,077	+		LRK54_RS07395	0.68	-0.0
1,593,077	+		LRK54_RS07395	0.68	-1.8
1,593,077	+		LRK54_RS07395	0.68	-0.5
1,593,077	+		LRK54_RS07395	0.68	-0.1
1,593,077	+		LRK54_RS07395	0.68	+0.7
1,593,077	+		LRK54_RS07395	0.68	-0.3
1,593,077	+		LRK54_RS07395	0.68	-0.3
1,593,077	+		LRK54_RS07395	0.68	-0.2
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