Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_24145

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
5,413,918	+				+0.1
5,413,990	+		AO356_24140	0.18	+1.5
5,413,999	+		AO356_24140	0.19	+0.0
5,413,999	+		AO356_24140	0.19	+0.2
5,414,000	-		AO356_24140	0.19	+1.3
5,414,000	-		AO356_24140	0.19	+0.6
5,414,089	+		AO356_24140	0.33	+1.0
5,414,090	-		AO356_24140	0.33	+1.3
5,414,093	-		AO356_24140	0.34	-0.3
5,414,093	-		AO356_24140	0.34	+1.0
5,414,239	+		AO356_24140	0.57	-0.7
5,414,475	+				-2.5
5,414,518	-				+0.7
5,414,564	+				+1.4
5,414,573	+				+0.1
5,414,610	+				+0.2
5,414,610	+				+0.0
5,414,611	-				-0.4
5,414,611	-				+0.3
5,414,860	+				-0.1
5,414,877	+				+0.7
5,414,877	+				-1.2
5,414,878	-				+0.5
5,414,878	-				-0.6
5,414,887	-				-0.8
5,414,888	+				+0.4
5,414,888	+				+0.2
5,414,889	-				-0.3
5,414,889	-				-0.0
5,414,889	-				+0.2
5,414,889	-				-0.1
5,414,892	+				-0.3
5,414,892	+				+0.6
5,414,892	+				-0.3
5,414,893	-				+0.6
5,414,893	-				+0.1
5,414,910	+				-0.5
5,414,910	+				-0.1
5,414,910	+				-1.3
5,414,913	+				+0.3
5,414,913	+				-0.5
5,414,913	+				-0.3
5,414,914	-				+0.7
5,414,977	-				+2.1
5,414,977	-				-2.3
5,415,039	+		AO356_24145	0.12	+0.2
5,415,039	+		AO356_24145	0.12	-0.4
5,415,040	-		AO356_24145	0.12	+0.3
5,415,040	-		AO356_24145	0.12	-0.5
5,415,166	+		AO356_24145	0.25	+0.2
5,415,166	+		AO356_24145	0.25	-1.1
5,415,167	-		AO356_24145	0.25	+0.2
5,415,228	+		AO356_24145	0.31	+0.2
5,415,237	+		AO356_24145	0.32	+0.5
5,415,237	+		AO356_24145	0.32	+0.5
5,415,237	+		AO356_24145	0.32	+1.6
5,415,238	-		AO356_24145	0.32	+0.2
5,415,238	-		AO356_24145	0.32	-0.2
5,415,253	+		AO356_24145	0.33	+0.7
5,415,253	+		AO356_24145	0.33	+2.0
5,415,254	-		AO356_24145	0.33	-0.4
5,415,262	+		AO356_24145	0.34	+0.3
5,415,262	+		AO356_24145	0.34	-3.4
5,415,262	+		AO356_24145	0.34	-0.1
5,415,263	-		AO356_24145	0.34	+0.5
5,415,263	-		AO356_24145	0.34	+0.7
5,415,263	-		AO356_24145	0.34	+0.3
5,415,263	-		AO356_24145	0.34	-1.0
5,415,263	-		AO356_24145	0.34	+1.1
5,415,286	+		AO356_24145	0.36	+0.3
5,415,297	+		AO356_24145	0.37	+1.8
5,415,297	+		AO356_24145	0.37	+0.0
5,415,328	+		AO356_24145	0.40	-2.0
5,415,328	+		AO356_24145	0.40	+0.2
5,415,328	+		AO356_24145	0.40	-0.3
5,415,329	-		AO356_24145	0.41	+1.3
5,415,420	+		AO356_24145	0.49	-1.3
5,415,420	+		AO356_24145	0.49	-0.5
5,415,420	+		AO356_24145	0.49	+0.3
5,415,420	+		AO356_24145	0.49	-0.5
5,415,420	+		AO356_24145	0.49	+1.0
5,415,420	+		AO356_24145	0.49	+0.8
5,415,420	+		AO356_24145	0.49	-1.3
5,415,420	+		AO356_24145	0.49	+0.6
5,415,420	+		AO356_24145	0.49	-2.6
5,415,421	-		AO356_24145	0.49	-0.6
5,415,421	-		AO356_24145	0.49	-0.6
5,415,421	-		AO356_24145	0.49	-0.4
5,415,421	-		AO356_24145	0.49	+0.1
5,415,421	-		AO356_24145	0.49	-0.1
5,415,421	-		AO356_24145	0.49	-0.1
5,415,421	-		AO356_24145	0.49	+0.6
5,415,421	-		AO356_24145	0.49	-0.7
5,415,421	-		AO356_24145	0.49	+0.6
5,415,421	-		AO356_24145	0.49	+0.2
5,415,421	-		AO356_24145	0.49	-1.7
5,415,424	+		AO356_24145	0.50	+1.1
5,415,424	+		AO356_24145	0.50	-0.2
5,415,424	+		AO356_24145	0.50	+0.5
5,415,424	+		AO356_24145	0.50	-0.4
5,415,424	+		AO356_24145	0.50	-0.1
5,415,424	+		AO356_24145	0.50	+0.1
5,415,424	+		AO356_24145	0.50	+0.0
5,415,425	-		AO356_24145	0.50	+0.0
5,415,425	-		AO356_24145	0.50	+1.1
5,415,425	-		AO356_24145	0.50	-0.1
5,415,499	+		AO356_24145	0.57	-0.2
5,415,500	-		AO356_24145	0.57	-1.0
5,415,500	-		AO356_24145	0.57	-0.0
5,415,579	+		AO356_24145	0.65	-0.0
5,415,579	+		AO356_24145	0.65	-0.4
5,415,579	+		AO356_24145	0.65	+0.5
5,415,579	+		AO356_24145	0.65	+0.5
5,415,579	+		AO356_24145	0.65	-1.6
5,415,579	+		AO356_24145	0.65	+0.2
5,415,580	-		AO356_24145	0.65	+0.2
5,415,580	-		AO356_24145	0.65	+0.8
5,415,580	-		AO356_24145	0.65	+0.2
5,415,580	-		AO356_24145	0.65	-0.1
5,415,580	-		AO356_24145	0.65	-0.6
5,415,583	+		AO356_24145	0.65	-0.4
5,415,684	+		AO356_24145	0.75	-0.3
5,415,685	-		AO356_24145	0.75	-0.5
5,415,685	-		AO356_24145	0.75	+0.5
5,415,685	-		AO356_24145	0.75	-0.0
5,415,804	+		AO356_24145	0.87	+0.8
5,415,831	-		AO356_24145	0.89	-1.0
5,415,851	-				-0.9
5,415,853	-				-0.2
5,415,860	-				-2.0
5,415,878	-				-0.6
5,415,878	-				-0.4
5,415,920	+				-0.5
5,415,921	-				-0.9
5,415,921	-				-0.4
5,415,963	+				+0.0
5,416,054	+		AO356_24150	0.20	-0.2
5,416,054	+		AO356_24150	0.20	+1.0
5,416,054	+		AO356_24150	0.20	-0.1
5,416,061	-		AO356_24150	0.21	-0.4
5,416,079	+		AO356_24150	0.25	+0.5
5,416,082	-		AO356_24150	0.26	+0.4
5,416,109	-		AO356_24150	0.32	+1.0
5,416,183	+		AO356_24150	0.49	-0.6
5,416,183	+		AO356_24150	0.49	-0.1
5,416,184	-		AO356_24150	0.49	-1.1
5,416,184	-		AO356_24150	0.49	+0.3
5,416,184	-		AO356_24150	0.49	-0.7
5,416,184	-		AO356_24150	0.49	-1.8
5,416,307	+		AO356_24150	0.76	+0.3
5,416,308	-		AO356_24150	0.77	-2.3
5,416,308	-		AO356_24150	0.77	-0.3
5,416,360	+		AO356_24150	0.88	-1.1
5,416,361	-		AO356_24150	0.88	+0.7
5,416,361	-		AO356_24150	0.88	-0.7
5,416,361	-		AO356_24150	0.88	-0.2
5,416,361	-		AO356_24150	0.88	+0.3
5,416,427	+				-0.2
5,416,427	+				+1.9
5,416,439	+				+0.1
5,416,440	-				-0.4
5,416,440	-				-0.4
5,416,440	-				+0.4
5,416,466	+				+0.7
5,416,478	+				-0.3
5,416,499	-				+0.3
5,416,500	+				-0.0
5,416,500	+				+0.9
5,416,770	+		AO356_24155	0.26	+0.2
5,416,824	+		AO356_24155	0.32	+0.2
5,416,824	+		AO356_24155	0.32	-0.9
5,416,824	+		AO356_24155	0.32	+0.2
5,416,824	+		AO356_24155	0.32	+0.5
5,416,824	+		AO356_24155	0.32	-0.9
5,416,825	-		AO356_24155	0.32	+0.5
5,416,825	-		AO356_24155	0.32	-1.3
5,416,825	-		AO356_24155	0.32	-0.1
5,416,825	-		AO356_24155	0.32	+0.3
5,416,888	-		AO356_24155	0.39	-0.1
5,416,896	-		AO356_24155	0.40	-2.5