Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3869

Experiment: KB with Carbenicillin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Carbenicillin 250 ug/ml
4,607,027	-				+0.5
4,607,027	-				+1.4
4,607,027	-				+0.2
4,607,027	-				+1.2
4,607,276	+		Psyr_3867	0.74	-0.3
4,607,277	-		Psyr_3867	0.75	+0.6
4,607,317	-		Psyr_3867	0.87	-0.2
4,607,354	+				-0.4
4,607,354	+				-0.8
4,607,384	+				-0.3
4,607,384	+				+0.5
4,607,384	+				+0.1
4,607,384	+				-0.3
4,607,565	-				+0.2
4,607,565	-				-1.8
4,607,784	+				+0.0
4,607,784	+				+0.8
4,607,846	+				-1.2
4,607,846	+				+1.3
4,607,846	+				-0.4
4,607,847	-				+1.4
4,607,847	-				+0.0
4,607,929	+				+1.2
4,607,929	+				-1.5
4,607,929	+				+0.8
4,607,998	+		Psyr_3869	0.11	-2.2
4,608,223	+		Psyr_3869	0.45	+0.8
4,608,223	+		Psyr_3869	0.45	+0.2
4,608,223	+		Psyr_3869	0.45	-1.2
4,608,224	-		Psyr_3869	0.45	+0.8
4,608,238	+		Psyr_3869	0.47	+1.1
4,608,262	+		Psyr_3869	0.51	+0.8
4,608,566	+				+0.8
4,608,567	-				-1.0
4,608,567	-				+0.3
4,608,702	-				+0.1
4,608,708	+				+0.7
4,608,709	-				+0.3
4,608,724	+				-0.0
4,608,724	+				-0.2
4,608,724	+				+1.3
4,608,725	-				-0.1
4,608,735	+				+0.1
4,608,819	+		Psyr_3870	0.38	-0.6
4,608,819	+		Psyr_3870	0.38	-0.2
4,608,819	+		Psyr_3870	0.38	+0.1
4,608,819	+		Psyr_3870	0.38	+0.1
4,608,819	+		Psyr_3870	0.38	+0.8
4,608,819	+		Psyr_3870	0.38	+0.2
4,608,819	+		Psyr_3870	0.38	+1.1
4,608,819	+		Psyr_3870	0.38	+1.8
4,608,819	+		Psyr_3870	0.38	-1.5
4,608,820	-		Psyr_3870	0.38	-0.4
4,608,820	-		Psyr_3870	0.38	+0.8
4,608,820	-		Psyr_3870	0.38	-0.2
4,608,820	-		Psyr_3870	0.38	+0.1
4,608,820	-		Psyr_3870	0.38	-1.0
4,608,820	-		Psyr_3870	0.38	-1.2
4,608,820	-		Psyr_3870	0.38	+0.8
4,608,820	-		Psyr_3870	0.38	+0.8
4,608,820	-		Psyr_3870	0.38	-0.2
4,608,820	-		Psyr_3870	0.38	-0.3
4,608,820	-		Psyr_3870	0.38	+0.8
4,608,862	+		Psyr_3870	0.59	+0.1
4,608,862	+		Psyr_3870	0.59	-0.2
4,608,862	+		Psyr_3870	0.59	+0.3
4,608,863	-		Psyr_3870	0.60	-0.4
4,608,865	+		Psyr_3870	0.61	-0.2
4,609,019	+				-0.3
4,609,019	+				+3.4
4,609,019	+				-0.4
4,609,019	+				+0.8
4,609,019	+				+1.2
4,609,019	+				+0.1
4,609,019	+				-0.8
4,609,020	-				-0.5
4,609,020	-				+0.3
4,609,020	-				-0.7
4,609,093	-				-0.6
4,609,093	-				-0.2
4,609,093	-				+0.1
4,609,138	+				+0.1
4,609,138	+				+0.3
4,609,150	+				+1.8
4,609,150	+				-0.3
4,609,150	+				+0.7
4,609,150	+				-0.6
4,609,150	+				+0.0
4,609,151	-				-0.7
4,609,151	-				-1.2
4,609,372	+				+0.8
4,609,373	-				+0.7
4,609,386	+				-0.2
4,609,386	+				-0.6
4,609,387	-				+3.1
4,609,387	-				+0.3
4,609,413	+				+1.4
4,609,560	+		Psyr_3871	0.16	-0.9
4,609,560	+		Psyr_3871	0.16	-0.1
4,609,560	+		Psyr_3871	0.16	+0.3
4,609,560	+		Psyr_3871	0.16	-0.0
4,609,561	-		Psyr_3871	0.16	-0.6
4,609,561	-		Psyr_3871	0.16	+1.2
4,609,561	-		Psyr_3871	0.16	-0.4