Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3296

Experiment: KB with Carbenicillin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Carbenicillin 250 ug/ml
3,943,920	+		Psyr_3295	0.57	-2.8
3,943,920	+		Psyr_3295	0.57	-3.3
3,943,987	-		Psyr_3295	0.60	-3.0
3,944,172	+		Psyr_3295	0.70	+0.0
3,944,187	+		Psyr_3295	0.70	-2.6
3,944,187	+		Psyr_3295	0.70	-1.4
3,944,188	-		Psyr_3295	0.71	-3.0
3,944,188	-		Psyr_3295	0.71	-2.1
3,944,224	-		Psyr_3295	0.72	-0.1
3,944,427	+		Psyr_3295	0.83	-1.9
3,944,427	+		Psyr_3295	0.83	-2.3
3,944,428	-		Psyr_3295	0.83	-4.1
3,944,553	+		Psyr_3295	0.89	-1.8
3,944,655	+				-2.8
3,944,656	-				-3.2
3,944,656	-				-2.5
3,944,656	-				-0.3
3,944,656	-				-1.8
3,944,659	+				-2.5
3,944,660	-				-2.5
3,944,660	-				-3.7
3,944,668	+				-3.0
3,944,668	+				-1.0
3,944,668	+				-1.9
3,944,668	+				-3.5
3,944,668	+				-2.1
3,944,668	+				-1.9
3,944,668	+				-0.3
3,944,669	-				-2.7
3,944,669	-				-1.9
3,944,669	-				+0.7
3,944,669	-				-1.8
3,944,669	-				-2.3
3,944,669	-				-2.3
3,944,676	+				-2.5
3,944,688	+				-3.0
3,944,689	-				-4.6
3,945,250	+		Psyr_3296	0.54	+0.5
3,945,250	+		Psyr_3296	0.54	-0.5
3,945,250	+		Psyr_3296	0.54	-0.9
3,945,258	-				-0.0
3,945,421	-		Psyr_3296	0.75	+1.2
3,945,618	+				+0.4
3,945,618	+				+0.7
3,945,618	+				+1.1
3,945,618	+				+0.4
3,945,619	-				-1.0
3,945,619	-				-0.4
3,945,619	-				+0.7
3,945,619	-				-0.3
3,945,619	-				-0.5
3,945,651	-				+0.6
3,945,709	+				-2.4
3,945,710	-				-0.9
3,945,852	-		Psyr_3297	0.14	-1.4
3,945,852	-		Psyr_3297	0.14	+0.5
3,945,852	-		Psyr_3297	0.14	+0.6
3,945,852	-		Psyr_3297	0.14	-0.2
3,945,865	+		Psyr_3297	0.15	+2.7
3,945,865	+		Psyr_3297	0.15	+0.0
3,945,866	-		Psyr_3297	0.15	+1.7
3,945,866	-		Psyr_3297	0.15	+1.7
3,945,866	-		Psyr_3297	0.15	+0.7
3,946,177	+		Psyr_3297	0.49	+0.4
3,946,177	+		Psyr_3297	0.49	-0.0
3,946,178	-		Psyr_3297	0.49	+0.1
3,946,178	-		Psyr_3297	0.49	+0.7
3,946,178	-		Psyr_3297	0.49	+1.2
3,946,197	+		Psyr_3297	0.51	+1.2
3,946,197	+		Psyr_3297	0.51	-0.5
3,946,197	+		Psyr_3297	0.51	+0.5
3,946,221	+		Psyr_3297	0.53	+1.3
3,946,222	-		Psyr_3297	0.54	-0.0
3,946,258	+		Psyr_3297	0.57	-0.9
3,946,258	+		Psyr_3297	0.57	+0.0
3,946,258	+		Psyr_3297	0.57	+0.0
3,946,259	-		Psyr_3297	0.57	-0.6
3,946,363	+		Psyr_3297	0.69	-0.6
3,946,363	+		Psyr_3297	0.69	-0.9
3,946,363	+		Psyr_3297	0.69	+0.2
3,946,364	-		Psyr_3297	0.69	-0.4
3,946,515	+		Psyr_3297	0.85	+2.3
3,946,524	+		Psyr_3297	0.86	-1.7
3,946,524	+		Psyr_3297	0.86	-0.4
3,946,524	+		Psyr_3297	0.86	-0.5
3,946,524	+		Psyr_3297	0.86	-2.6
3,946,525	-		Psyr_3297	0.86	-1.3
3,946,525	-		Psyr_3297	0.86	-0.2
3,946,525	-		Psyr_3297	0.86	+0.2
3,946,525	-		Psyr_3297	0.86	+0.7